Molecular and morphological characterization of Tylenchus zeae n. sp. (Nematoda: Tylenchida) from Corn (Zea mays) in South Carolina
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References
- Andrassy, I. 1979. The genera and species of the family Tylenchidae Örley, 1880 (Nematoda). The genus Tylenchus Bastian, 1865. Acta Zoologica Academiae Scientarum Hungaricae 25:1–3.
- Andrassy, I. 1981. The genera and species of the family Tylenchidae Örley, 1880 (Nematoda). The genus Malenchus Andrassy, 1968. Acta Zoologica Academiae Scientarum Hungaricae 27:1–47.
- Atighi, M. R., Pourjam, E. Pereira, T. J., Okhovvat, S. M., Alizada, B. A., Mundo-Ocampo, M., and Baldwin, J. G. 2013. Redescription of Filenchus annulatus (Siddiqui & Khan, 1983) Siddiqi, 1986 based on specimens from Iran with contributions to the molecular phylogeny of the Tylenchidae. Nematology 15:129–141.
- Bai, M., Qing, X., Qiao, K., Ning, X., Xiao, S., Cheng, X., and Liu, G. 2020. Mitochondrial COI gene is valid to delimitate Tylenchidae (Nematoda: Tylenchomorpha) species. Journal of Nematology 52:1–12.
- Bert, W. and Geraert, E. 2000. Nematode species of the order Tylenchida, new to the Belgian nematofauna with additional morphological data. Belgian Journal of Zoology 130:47–57.
- Bert, W., Leliaert, F., Vierstraete, A. R., Vanfleteren, J. R., and Borgonie, G. 2008. Molecular phylogeny of the Tylenchina and evolution of the female gonoduct (Nematoda: Rhabditida). Molecular Phylogenetics and Evolution 482:728–744. https://doi.org/10.1016/j.ympev.2008.04.011
- Blaxter, M. L., De Ley, P., Garey, J. R., Liu, L. X., Scheldeman, P., Vierstraete, A., Vanfleteren, J. R., Mackey, L. Y., Dorris, M., Frisse, L. M., and Vida, J. T. 1998. A molecular evolutionary framework for the phylum Nematoda. Nature 392:71–75.
- Bongers, T. 1988. De nematoden van Nederland. Utrecht, The Netherlands: K.N.N.V.
- Brzeski, M.W. 1996. Comments on some known species of the genus Tylenchus and description of the Tylenchus stachys sp.n. (Nematoda: Tylenchidae). Nematologica 42:387–407.
- Ciobanu, M., Geraert, E., and Popovici, I. 2003. The genus Tylenchus Bastian, 1865 in Romania (Nematoda: Tylenchidae). Nematologia Mediterranea 31:47–54.
- Darriba, D., Taboada, G., Doallo, R., and Posada, D. 2012. jModelTest 2: More models, new heuristics and parallel computing. Nature Methods 9:772.
- De Ley, P., De Ley, I. T., Morris, K., Abebe, E., Mundo-Ocampo, M., Yoder, M., Heras, J., Waumann, D., Rocha-Olivares, A., Burr, A. H. J., Baldwin, J. G., and Thomas, W. K. 2005. An integrated approach to fast and informative morphological vouchering of nematodes for applications in molecular barcoding. Philosophical Transactions: Biological Sciences 360:1945–1958.
- Derycke, S., Vanaverbeke, J., Rigaux, A., Backeljau, T., and Moens, T. 2010. Exploring the use of cytochrome oxidase c subunit 1 (COI) for DNA barcoding of free-living marine nematodes. PLoS One Oct 28;5(10):e13716. doi: 10.1371/journal.pone.0013716
- Geraert, E. 2008. The Tylenchidae of the world: Identification of the family Tylenchidae (Nematoda). Ghent, Belgium: Academia Press.
- Golden, A. M. 1990. Preparation and mounting nematodes for microscopic observations. Pp. 197–205 in B. M. Zuckerman, W. F. Mai, and L. R. Krusberg, eds. Plant nematology laboratory manual. Amherst, MA: University of Massachusetts Agricultural Experiment Station.
- Holtermann, M., van der Wurff, A., van den Elsen, S., van Megen, H., Bongers, T., Holovachov, O., Bakker, J., and Helder, J. 2006. Phylum-wide analysis of SSU rDNA reveals deep phylogenetic relationships among nematodes and accelerated evolution toward crown clades. Molecular Biology and Evolution 23:1792–1800.
- Hooper, D. J. 1970. Handling, fixing, staining, and mounting nematodes. Pp. 39–54 in J. F. Southey, ed. Laboratory methods for work with plant and soil nematodes, 5th ed. London: Her Majesty’s Stationery Office.
- Huelsenbeck, J. P., and Ronquist, F. 2001. MRBAYES: Bayesian inference of phylogenetic trees. Bioinformatics 17:754–755.
- Jenkins, W. R. 1964. A rapid centrifugal flotation technique for separating nematodes from soil. Plant Disease Reporter 48:692.
- Khan, M. L., and Khan, S. H. 1978. Two new and a known species of Tylenchus Bastian (Nematoda: Tylenchinae) from Afghanistan. Nematologia Mediterranea 6:213–221.
- Miller, M. A., Pfeiffer, W., and Schwartz, T. 2010. Creating the CIPRES Science Gateway for inference of large phylogenetic trees. Pp. 1–8, in Proceedings of the Gateway Computing Environments Workshop (GCE), 14 November 2010, New Orleans, LA.
- Mortazavi, P., Heydari, F., Abolafia, J., Castillo, P., and Pedram, M. 2021. Morphological and molecular characterization of Filenchus pseudodiscus n. sp. from East Golestan province, north Iran; with an updated phylogeny of Malenchus Andrássy, 1968 (Tylenchomorpha: Tylenchidae). Journal of Nematology Aug 5;53:e2021-69.
- Munawar, M., Yevtushenko, D. P., and Castillo, P. 2021. First report of three Tylenchidae taxa from Southern Alberta, Canada. Horticulturae 7:449. https://doi.org/10.3390/horticulturae7110449
- Ortiz, V., Phelan, S., and Mullins, E. 2016. A temporal assessment of nematode community structure and diversity in the rhizosphere of cisgenic Phytophthora infestans-resistant potatoes. BMC Ecology. 16:55. doi: 10.1186/s12898-016-0109-5.
- Qing, X., and Bert, W. 2019. Family Tylenchidae (Nematoda): An overview and perspectives. Organisms Diversity and Evolution 19:391–408.
- Qing, X., Decraemer, W., Claeys, M., and Bert, W. 2017. Molecular phylogeny of Malenchus and Filenchus (Nematoda: Tylenchidae). Zoologica Scripta 46: 625–36.
- Siddiqi, M. R. 1963. Four new species of the genus Tylenchus Bastian, 1865 (Nematoda) from North India. Zeitschrift fur Parasitenkunde 23:170–180.
- Skantar, A. M., Handoo, Z. A., Subbotin, S. A., Kantor, M. R., Vieira, P., Agudelo, P., Hult, M. N., and Rogers, S. 2021. First report of Seville root-knot nematode, Meloidogyne hispanica (Nematoda: Meloidogynidae) in the USA and North America. Journal of Nematology 53:1–7. doi: 10.21307/jofnem-2021-098
- Thomas, W. K., Vida, J. T., Frisse, L. M., Mundo, M., and Baldwin, J. G. 1997. DNA sequences from formalin–fixed nematodes: Integrating molecular and morphological approaches to taxonomy. Journal of Nematology 29:250–254.
- Thorne, G., 1962. Principles of nematology. Soil Science 93(1):70.
- Tylka, G. L., Sisson, A. J., Jesse, L. C., Kennicker, J., & Marett, C. C. 2011. Testing for plant-parasitic nematodes that feed on corn in Iowa 2000–2010. Plant Health Progress 12:2.
- U.S. Department of Agriculture, National Agricultural Statistics Service. 2019a. Corn is America’s largest crop in 2019. https://www.usda.gov/media/blog/2019/07/29/corn-americas-largest-crop-2019
- U.S. Department of Agriculture, National Agricultural Statistics Service. 2019b. 2019 state agriculture overview. https://www.nass.usda.gov/Quick_Stats/Ag_Overview/stateOverview.php?state=SOUTH%20CAROLINA
- van Megen, H., van den Elsen, S., Holterman, M., Karssen, G., Mooyman, P., Bongers, T., Holovachov, O. V., Bakker, J., and Helder, J. 2009. A phylogenetic tree of nematodes based on about 1200 full-length small subunit ribosomal DNA sequences. Nematology 11:927–950.
- Yan, G., Friskop, A., and Ransom, J. 2016. Plant-parasitic nematodes on corn and evaluation of corn varieties for resistance to nematodes. https://www.ndcorn.org/plant-parasitic-nematodes-corn-evaluation-corn-varieties-resistance-nematodes/
- Yeates, G. W., Bongers, T., de Goede, R. G. M., Freckman, D. W., and Georgieva, S. S. 1993. Feeding habits in soil nematode families and genera—an outline for soil ecologists. Journal of Nematology 25: 315–331.
Language: English
Submitted on: May 12, 2022
Published on: Feb 28, 2023
Published by: Society of Nematologists, Inc.
In partnership with: Paradigm Publishing Services
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© 2023 Mihail R. Kantor, Zafar A. Handoo, Sergei A. Subbotin, Joseph D. Mowery, Maria N. Hult, Stephen Rogers, Andrea M. Skantar, published by Society of Nematologists, Inc.
This work is licensed under the Creative Commons Attribution 4.0 License.