Have a personal or library account? Click to login
Three species of dominant plant parasitic nematodes associated with banana plants in Yogyakarta Special Region Province, Indonesia Cover

Three species of dominant plant parasitic nematodes associated with banana plants in Yogyakarta Special Region Province, Indonesia

Open Access
|May 2025

References

  1. Araya, T.Z., Padilla, W.P., Archidona-Yuste, A., Cantalapiedra-Navarrete, C., Liébanas, G., Palomares-Rius, J.E., Castillo, P. (2016): Root-lesion nematodes of the genus Pratylenchus (Nematoda: Pratylenchidae) from Costa Rica with molecular identification of P. gutierrezi and P. panamaensis topotypes. Eur J Plant Pathol, 145: 973 – 998. DOI: 10.1007/s10658-016-0884-z
  2. Bhat, K.A., Mir, R.A., Farooq, A., Manzoor, M., Hami, A., Allie, K.A., Wani, K.A., Khan, S.M., Sayyed, R.Z., Poczai, P., Almaliki, W. A. (2022): Advances in nematode identification: A journey from fundamentals to evolutionary aspects. Diversity, 14(7): 536. DOI: 10.3390/d14070536
  3. Budiman, A., Supramana, S., Giyanto, G. (2019): Morphological and molecular characteristics of Pratylenchus coffeae from the origin of Robusta coffee plantation in Malang, East Java. J Perlindungan Tanaman Indones, 23(2): 211 – 218. DOI: 10.22146/jpti.42481
  4. Castillo, P., Vovlas, N. (2007): Pratylenchus (Nematoda: Pratylenchidae): Diagnosis, Biology, Pathogenicity and Management, Nematology Monographs and Perspectives. Leiden, Boston, Brill, 530 pp.
  5. Daramola, F.Y., Orisajo, S.B., Malan, A.P., Marais, M. (2020): Molecular characterization of Helicotylenchus multicinctus and H. dihystera (Tylenchida: Hoplolaimidae) from Theobroma cacao in Nigeria. Zootaxa, 4778(2): 343 – 356. DOI: 10.11646/zootaxa.4778.2.6
  6. De Ley, P., De Ley, I.T., Morris, K., Abebe, E., Mundo-Ocampo, M., Yoder, M., Heras, J., Waumann, D., Rocha-Olivares, A., Jay Burr, A.H., Baldwin, J.G., Thomas, W.K. (2005): An integrated approach to fast and informative morphological vouchering of nematodes for applications in molecular barcoding. Philos Trans R Soc Lond B Biol Sci, 360(1462): 1945 – 1958. DOI: 10.1098/rstb.2005.1726
  7. De Ley, P., Félix, M.A., Frisse, L., Nadler, S., Sternberg, P., Thomas, W.K. (1999): Molecular and morphological characterisation of two reproductively isolated species with mirrorimage anatomy (Nematoda: Cephalobidae). Nematology, 1(6): 591 – 612. DOI: 10.1163/156854199508559
  8. De Oliveira, C.M.G., Monteiro, A.R., Blok, V.C. (2011): Morphological and molecular diagnostics for plant-parasitic nematodes: working together to get the identification done. Trop Plant Pathol, 36(2): 65 – 73
  9. De Waele, D., Elsen, A. (2002): Migratory Endoparasites: Pratylenchus and Radopholus Species. In: Starr, J.L., Cook, R., Bridge, J. (Eds) Plant Resistance to Parasitic Nematodes. CAB International. Retrieved from https://cabidigitallibrary.org by 125.165.233.174.
  10. Duncan, L.W., Inserra, R.N., Thomas, W.K., Dunn, D., Mustika, I., Frisse, L.M., Mendes, M.L., Morris, K., Kaplan, D.T. (1999): Investigation-Research: molecular and morphological analysis of isolates of Pratylenchus coffeae and closely related species. Nematropica, 29(1): 61 – 80
  11. Duncan, L.W., Moens, M. (2006): Migratory endoparasitic nematodes. In: Perry, R.N., Moens, M. (Eds) Plant Nematology. Wallingford, Oxfordshire: CAB International, pp. 123 – 152
  12. Elbadri, G.A., Geraert, E., Moens M. (1999): Morphological differences among Radopholus similis (Cobb, 1893) Thorne, 1949 populations. Russ J Nematol, 7(2): 139 – 153
  13. Gowen, S.R., Quénéhervé, P., Fogain, R. (2005): Nematode parasites of bananas and plantains. In: Sikora, R.A., Coyne, D., Hallmann, J., Timper, P. (Eds) Plant Parasitic Nematodes in Subtropical and Tropical Agriculture. Wallingford, UK: CABI Publishing, pp. 611 – 644. DOI: 10.1079/9780851997278.0611
  14. Handoo, Z.A., Golden, A.M. (1989): A key and diagnostic compendium to the species of the genus Pratylenchus Filipjev, 1936 (lesion nematodes). J Nematol, 21(2): 202
  15. Jones, M.G.K., Fosu-Nyarko J. (2014): Molecular biology of root lesion nematodes (Pratylenchus spp.) and their interaction with host plants. Ann Appl Biol, 164(2): 163 – 181. DOI: 10.1111/aab.12105
  16. Kimura, M. (1980): A simple method for estimating evolutionary rate of base substitutions through comparative studies of nucleotide sequences. J Mol Evol, 16(2): 111 – 120. DOI: 10.1007/BF01731581
  17. Maharani, R., Indarti, S., Soffan, A., Hartono, S. (2023): Aphelenchoides varicaudatus (Nematoda: Aphelenchoididae) and Helicotylenchus erythrinae (Nematoda: Hoplolaimidae) from Garlic Plantation in Magelang, Central Java, Indonesia. Helminthologia, 60(1): 94 – 105. DOI: 10.2478/helm-2023-0007
  18. Morindya, R., Indarti, S., Soffan, A., Hartono, S. (2023): Optimization of DNA extraction methods for genomic analysis of rice root-knot nematode (Meloidogyne graminicola) using PCR (polymerase chain reaction) and sanger sequencing. J Plant Prot Res, 63(1): 50 – 58. DOI: 10.24425/jppr.2022.144416
  19. Quénéhervé, P., Barrière, V., Salmon, F., Houdin, F., Achard, R., Gertrude, J.C., Marie-Luce, S., Chabrier, C., Duyck, P.F., Tixier, P. (2011): Effect of banana crop mixtures on the plant-feeding nematode community. Appl Soil Ecol, 49: 40 – 45. DOI: 10.1016/j.apsoil.2011.07.003
  20. Riascos-Ortiz, D., Mosquera-Espinosa, A.T., De Agudelo, F.V., De Oliveira, C.M.G., Muñoz-Florez, J.E. (2022): Non-Conventional Management of Plant-Parasitic Nematodes. In: Chaudhary, K.K., Meghvansi, M.M. (Eds) Sustainable Management of Nematodes in Agriculture, Vol.1: Organic Management. Sustainability in Plant and Crop Protection. UK: Springer, Cham, pp. 381 – 422. DOI: 10.1007/978-3-031-09943-4_15
  21. Roy, K., Roy, S., Sarkar, S., Rathod, A., Pramanik, A. (2014): Diversity of migratory nematode endoparasites of banana. J. Crop Weed, 10(2): 375 – 391
  22. Roy, S., Roy, K., Sarkar, S., Rathod, A., Hore, J. (2018): Intra-specific morphological and morphometric variability of Radopholus similis (Cobb, 1893) Thorne, 1949. J Appl Nat Sci, 10(3): 841 – 846. DOI: 10.31018/jans.v10i3.1717
  23. Sarah, J.L., Pinochet, J., Stanton, J. (1996): The Burrowing Nematode of Bananas, Radopholus similis Cobb, 1913. Montpellier: INIBAP.
  24. Sher, S.A. (1968): Revision of the genus Radopholus Thorne, 1949 (Nematoda: Tylenchoidea). Proc Helminthol Soc Wash, 35(2): 219 – 237
  25. Siddiqi, M.R. (1972): On the genus Helicotylenchus Steiner, 1945 (Nematoda: Tylenchida), with descriptions of nine new species. Nematologica, 18: 74 – 91. DOI: 10.1163/187529272X00278
  26. Sikora, R.A., Coyne, D., Hallmann, J., Timper, P. (2018): Plant Parasitic Nematodes in Subtropical and Tropical Agriculture. Cambridge, UK, CABI Publishing, 876 pp.
  27. Subbotin, S.A., Sturhan, D., Vovlas, N., Castillo, P., Tambe, J.T., Moens, M., Baldwin J.G. (2007): Application of the secondary structure model of rRNA for phylogeny: D2–D3 expansion segments of the LSU gene of plant-parasitic nematodes from the family Hoplolaimidae Filipjev, 1934. Mol Phylogenet Evol, 43(3): 881 – 890. DOI: 10.1016/j.ympev.2006.09.019
  28. Tamura, K., Stecher, G., Kumar, S. (2021): MEGA 11: Molecular Evolutionary Genetics Analysis Version 11. Mol Biol Evol, 38(7): 3022 – 3027. DOI: 10.1093/molbev/msab120
  29. Tuyet, N.T., Elsen, A., Nhi, H.H., De Waele, D. (2012): Morphological and morphometrical characterization of ten Pratylenchus coffeae population from Vietnam. Russ J Nematol, 20(1): 75 – 93
  30. Tzortzakakis, E.A., Cantalapiedra-Navarrete, C., Castillo, P., Palomares-Rius, J.E., Archidona-Yuste, A. (2017): Morphological and molecular identification of Longidorus euonymus and Helicotylenchus multicinctus from the rhizosphere of grapevine and banana in Greece. J Nematol, 49(3): 233 – 235
  31. Uribe, G.E.M., Bert, W., Vierstraete, A.R., De La Pena, E., Moens, M., Decraemer, W. (2010): Burrowing nematodes from Colombia and their relationship with Radopholus similis populations, R. arabocoffeae and R. duriophilus. Nematology, 12(4): 619 – 629. DOI: 10.1163/138855410X12628646276005
  32. Van Bezooijen, J. (2006): Methods and Technique for Nematology. Wageningen University, Wageningen.
  33. Whitehead, A.G., Hemming, J.R. (1965): A comparison of some quantitative methods of extracting small vermiform nematodes from soil. Ann Appl Biol, 55: 25 – 38
  34. Xin, Y., Xie, J., Nan, B., Tang, C., Xiao, Y., Wu, Q., Lin, Y., Zhang, X., Shen, H. (2021): Freeze-Thaw pretreatment can improve efficiency of bacterial DNA extraction from meconium. Front Microbiol, 12: 75368. DOI: 10.3389/fmicb.2021.753688
  35. Xu, C.L., Li, Y., Xie, H., Huang, X., Wu, W.J., Yu, L., Wang, D.W. (2014): Morphological and karyotypic differences within and among populations of Radopholus similis. ZooKeys, 444: 69 – 93. DOI: 10.3897/zookeys.444.8186
DOI: https://doi.org/10.2478/helm-2025-0004 | Journal eISSN: 1336-9083 | Journal ISSN: 0440-6605
Language: English
Page range: 50 - 61
Submitted on: May 3, 2024
|
Accepted on: Mar 7, 2025
|
Published on: May 24, 2025
In partnership with: Paradigm Publishing Services
Publication frequency: Volume open

© 2025 N. A. Nurlaili, S. Indarti, N. S. Putra, A. Soffan, published by Slovak Academy of Sciences, Institute of Parasitology
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.