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Three species of dominant plant parasitic nematodes associated with banana plants in Yogyakarta Special Region Province, Indonesia Cover

Three species of dominant plant parasitic nematodes associated with banana plants in Yogyakarta Special Region Province, Indonesia

Open Access
|May 2025

Figures & Tables

Fig. 1.

Nematode morphology of R. similis. (a) female (v = vulva); (b,c) anterior (s = stylet; k = knob; dgo = dorsal gland opening; m = metacorpus; ep = excretory pore); (d,e) female posterior (a = anus); (f) vulva (v). Magnification: (a) 100x; (b,e,f) 1000x; (c,d) 400x. Scale bar: 10 μm
Nematode morphology of R. similis. (a) female (v = vulva); (b,c) anterior (s = stylet; k = knob; dgo = dorsal gland opening; m = metacorpus; ep = excretory pore); (d,e) female posterior (a = anus); (f) vulva (v). Magnification: (a) 100x; (b,e,f) 1000x; (c,d) 400x. Scale bar: 10 μm

Fig. 2.

Nematode morphology of P. coffeae. (a) female; (b) male; (c,d) anterior (ep = excretory pore; s = stylet; k = knob; dgo = dorsal gland opening; m = metacorpus); (e) female posterior (v = vulva; a = anus); (f) male posterior (sp = spicule, ca = caudal alae). Magnification: (a,b) 100x; (c,e,f) 400x; (d) 1000x. Scale bar: 10 μm
Nematode morphology of P. coffeae. (a) female; (b) male; (c,d) anterior (ep = excretory pore; s = stylet; k = knob; dgo = dorsal gland opening; m = metacorpus); (e) female posterior (v = vulva; a = anus); (f) male posterior (sp = spicule, ca = caudal alae). Magnification: (a,b) 100x; (c,e,f) 400x; (d) 1000x. Scale bar: 10 μm

Fig. 3.

Nematode morphology of H. multicinctus. (a) female (v = vulva); (b) male (sp = spicula); (c) anterior (s = stylet; k = knob; dgo = dorsal gland opening; m = metacorpus); (d) vulva (v); (e,f) female posterior (v = vulva; a = anus); (g,h) male posterior (sp = spicule, ca = caudal alae). Magnification: (a,b) 100x; (c,d,f,g) 1000x; (e,h) 400x. Scale bar: 10 μm
Nematode morphology of H. multicinctus. (a) female (v = vulva); (b) male (sp = spicula); (c) anterior (s = stylet; k = knob; dgo = dorsal gland opening; m = metacorpus); (d) vulva (v); (e,f) female posterior (v = vulva; a = anus); (g,h) male posterior (sp = spicule, ca = caudal alae). Magnification: (a,b) 100x; (c,d,f,g) 1000x; (e,h) 400x. Scale bar: 10 μm

Fig. 4.

Maximum likelihood phylogenetic tree of partial 28S rRNA segments with the Kimura-2 (K2) model from the species R. similis identified in Turi, Yogyakarta, Indonesia. The substitution model is selected based on the lowest Bayesian Information Criterion (BIC) value. The model with the lowest BIC value is considered to best describe the substitution pattern. ML tree was performed in the MEGA XI program
Maximum likelihood phylogenetic tree of partial 28S rRNA segments with the Kimura-2 (K2) model from the species R. similis identified in Turi, Yogyakarta, Indonesia. The substitution model is selected based on the lowest Bayesian Information Criterion (BIC) value. The model with the lowest BIC value is considered to best describe the substitution pattern. ML tree was performed in the MEGA XI program

Fig. 5.

Maximum likelihood phylogenetic tree of partial 28S rRNA segments with the Kimura-2 model and Gamma (K2+G) distribution pattern of the P. coffeae species identified in Kasihan, Yogyakarta, Indonesia. The substitution model is selected based on the lowest Bayesian Information Criterion (BIC) value. The model with the lowest BIC value is considered to best describe the substitution pattern. ML tree was performed in the MEGA XI program
Maximum likelihood phylogenetic tree of partial 28S rRNA segments with the Kimura-2 model and Gamma (K2+G) distribution pattern of the P. coffeae species identified in Kasihan, Yogyakarta, Indonesia. The substitution model is selected based on the lowest Bayesian Information Criterion (BIC) value. The model with the lowest BIC value is considered to best describe the substitution pattern. ML tree was performed in the MEGA XI program

Fig. 6.

Maximum likelihood phylogenetic tree of partial 28S rRNA segments with the Kimura-2 (K2) model from the species H. multicinctus identified in Jetis, Yogyakarta, Indonesia. The substitution model is selected based on the lowest Bayesian Information Criterion (BIC) value. The model with the lowest BIC value is considered to best describe the substitution pattern. ML tree was performed in the MEGA XI program
Maximum likelihood phylogenetic tree of partial 28S rRNA segments with the Kimura-2 (K2) model from the species H. multicinctus identified in Jetis, Yogyakarta, Indonesia. The substitution model is selected based on the lowest Bayesian Information Criterion (BIC) value. The model with the lowest BIC value is considered to best describe the substitution pattern. ML tree was performed in the MEGA XI program

Morphometry of Radopholus similis females from Turi, Yogyakarta Special Region compared with R_ similis from Kerala (Roy et al_, 2018), and Netherlands (Xu et al_, 2014)_ Measurement unit = μm, mean ± standard deviation (range)_

SpeciesR. similis (this study)R. similis (Roy et al., 2018)R. similis (Xu et al., 2014)

LocationYogyakarta, IndonesiaThiruvan-anthapuram, KeralaNetherlands

HostBanana (Musa sp.)Banana (Musa sp.)Zebra plant (Calathea zebrina)

FemaleFemaleFemale
N72020
L620.4 ± 34.9 (564.9 – 676.6)550.4 ± 44.8 (500 – 660)781 ± 31.48 (700 – 842.5
a28.7 ± 3.8 (22.5 – 32.6)31.7 ± 2.4 (27.3 – 35.0)27.9 ± 1.61 (24.4 – 30.6)
b1.1 ± 0.1 (1 – 1.2)5.2 ± 1.0 (4.2 – 6.6)6 ± 0.35 (5.3 – 6.6)
b'5.39 ± 1.19 (3.16 – 6.85)-4.9 ± 0.29 (4.3 – 5.3)
c10.3 ± 2.7 (7 – 15.5)9.4 ± 0.6 (7.8 – 10.2)9.1 ± 0.52 (8.4 – 10.5)
c'4.4 ± 0.7 (3.8 – 5.2)3.2 ± 0.3 (2.8 – 3.8)4.4 ± 0.28 (3.9 – 4.9)
V (%)57 ± 0.9 (55.8 – 58.6)58 ± 1.3 (56 – 59)55.1 ± 1.2 (52.4 – 56.7)
Tip lip width7.4 ± 0.5 (6.6 – 8)--
Base lip width8.8 ± 0.6 (8 – 9.8)--
Lip height3.1 ± 0.1 (3 – 3.3)3.3 ± 0.4 (3 – 4)-
S18.9 ± 0.6 (18 – 19.9)15.8 ± 1.5 (14 – 18)18.5 ± 0.71 (17.3 – 19.4)
Knob width3.8 ± 0.3 (3.2 – 4.2)4.3 ± 0.5 (4 – 5)-
Knob height2.4 ± 0.4 (1.6 – 2.7)--
DGO5.4 ± 0.6 (4.5 – 6.4)4.4 ± 0.6 (3.5 – 5)-
Anterior distance to EP90.2 ± 9.7 (82.5 – 110.1)74.3 ± 7.2 (63 – 84)-
Anterior distance to the vulva353.8 ± 22.9 (321.7 – 396.7)--
Vulva distance to the posterior254.2 ± 21.9 (210.6 – 273.9)--
Vulva distance to the anus210.2 ± 35.7 (175.9 – 279)--
t63.5 ± 15.2 (43.8 – 91.1)58.7 ± 7.3 (46 – 71)85.9 ±5.28 (77.5 – 95)
W22 ± 3 (17.6 – 26.5)17.3 ± 2.2 (13 – 21)-
Vulva body width21.9 ± 2.7 (18.5 – 26.5)--
Anus/cloaca body width14.3 ± 1.8 (11.5 – 17.4)18.4 ± 3.0 (14 – 23)-

Morphometrics of Helicotylenchus multicinctus from the Jetis, Yogyakarta Special Region was compared with populations of H_ multicinctus from Greece ((Tzortzakakis et al_, 2017)_ Measurement unit = μm, mean ± standard deviation (range)_

SpeciesH. multicinctus (this study)H. multicinctus (Tzortzakakis et al., 2017)

LocationYogyakarta, IndonesiaTertsa, Greece

HostBanana (Musa sp.)Banana (Musa sp.)

FemaleMaleFemaleMale
N844-
L541 ± 71.4 (410.4 – 642)494.3 ± 18.8 (467.3 – 516.4)570 ± 65.4 (508 – 640)-
a23.6 ± 2.3 (19.8 – 27)28.5 ± 1.7 (26.8 – 31)--
b1.03 ± 0.01 (1.02 – 1.05)1.03 ± 0 (1.03 – 1.03)--
b'4.70 ± 0.69 (3.51 – 5.81)4.59 ± 0.11 (4.43 – 4.75)--
c44.8 ± 7.2 (32.7 – 50.8)36.9 ± 2.8 (33.4 – 40.4)--
c'1 ± 0.2 (0.8 – 1.4)50.8 ± 2.6 (46.5 – 53.3)--
V (%)67.9 ± 1.1 (66.2 – 69.1)---
Tip lip width4.3 ± 0.3 (4 – 4.9)4 ± 0.5 (3.3 – 4.6)--
Base lip width7.6 ± 0.5 (7 – 8.4)6.4 ± 0.3 (6 – 6.7)--
Lip height3.7 ± 0.5 (3. – 4.4)3.4 ± 0.5 (2.6 – 3.8)--
S27.5 ± 1.6 (29.3 – 24.3)24.5 ± 0.9 (23.5 – 25.8)22.3 ± 1.0 (21.0 – 23.0)-
Knob width5.4 ± 0.4 (4.9 – 5.9)4.3 ± 0.3 (3.8 – 4.7)--
Knob height2.7 ± 0.4 (1.9 – 3.2)2.3 ± 0.2 (2.2 – 2.6)--
DGO9.6 ± 1.8 (6.2 – 12.1)9 ± 0.4 (8.6 – 9.6)8.8 ± 0.6 (8.0 – 9.5)-
Anterior distance to EP96.5 ± 8.1 (83 – 106.5)-89.3 ± 4.8 (84.0 – 95.0)-
Anterior distance to the vulva367 ± 46.2 (281.7 – 429.9)---
Vulva distance to the posterior168.6 ± 29.9 (119.5 – 212.1)---
Vulva distance to the anus156.9 ± 29.7 (108.8 – 200.2)---
t12.2 ± 1.3 (10.6 – 15.4)13.5 ± 0.9 (12 – 14.5)11.0 ± 0.8 (10.0 – 12.0)-
W23 ± 2.9 (18.6 – 26.2)17.5 ± 1.4 (15 – 18.8)--
Vulva body width21 ± 3.4 (16.2 – 26)---
Anus/cloaca body width12.5 ± 1.2 (10.7 – 14)9.8 ± 0.7 (8.9 – 10.9)--

Morphometrics of Pratylenchus coffeae from Kasihan, Yogyakarta Special Region compared with P_ coffeae from Malang, Indonesia (Budiman et al_, 2019), and Dien Bien, Vietnam (Tuyet et al_, 2012)_ Measurement unit = μm, mean ± standard deviation (range)_

SpeciesP. coffeae (this study)P. coffeae (Budiman et al., 2019)P. coffeae (Tuyet et al., 2012)

LocationYogyakarta, IndonesiaMalang, IndonesiaDien Bien, Vietnam

HostBanana (Musa sp.)Robusta coffee (Coffea canephora)Banana (Musa sp.)

FemaleMaleFemaleMaleFemaleMale
N7526241515
L604 ± 64.2 (507.3 – 731)492 ± 45.5 (419.3 – 561.6)556.4 ± 47.2 (487.4 – 654.4)505.9 ± 39.5 (441.6 – 641)605.6 ± 43.9 (519 – 664)540.2 ± 22.1 (498.6 – 571.3)
a26 ± 1.9 (24 – 28.8)27.8 ± 2.1 (24.7 – 30.8)28.5 ± 3 (23.4 – 34.2)32.3 ± 2.5 (27.4 – 39.4)26.4 ± 1.9 (21.9 – 29.0)29.0 ± 2.1 (24.6 – 32.3)
b1.05 ± 0.00 (1.04 – 1.06)1.05 ± 0 (1.05 – 1.05)6.1 ± 0.6 (4.8 – 7.8)5.5 ± 0.4 (4.8 – 5.5)7.1 ± 0.3 (6.6 – 7.8)7.0 ±0.4 (6.3 – 7.7)
b'5.62 ± 0.73 (4.81 – 6.97)5.13 ± 0.75 (4.19 – 6.31)4.1 ± 0.4 (3.3 – 5.2)3.9 ± 0.3 (3.4 – 4.8)4.2 ± 0.3 (3.8 – 4.7)4.4 ± 0.3 (3.8 – 5.0)
c19.9 ± 1.8 (17.4 – 23.7)21.6 ± 0.7 (20.6 – 22.7)20.1 ± 2.4 (15 – 24.1)15.3 ± 2.9 (12.4 – 21.6)19.1 ± 1.3 (17.2 – 22.2)17.5 ± 1.8 (15.6 – 23.4)
c'2.4 ± 0.3 (2 – 2.9)44.6 ± 5.2 (34.5 – 48.3)2.3 ± 0.3 (1.6 – 3)2.8 ± 0.4 (2.1 – 3.5)2.4 ± 0.4 (1.9 – 3.2)2.7 ± 0.4 (2.0 – 3.3)
V (%)79.6 ± 0.9 (78.2 – 80.6)-81.7 ± 1.2 (79.5 – 83.9)-80.0 ± 1.6 (77.3 – 83.0)-
Tip lip width6.2 ± 0.6 (5.4 – 7.1)5.1 ± 0.8 (4.2 – 6.3)----
Base lip width7.9 ± 0.6 (6.9 – 8.7)6.3 ± 0.4 (5.6 – 6.7)7.6 ± 0.4 (7 – 8.2)6.3 ± 0.3 (5.9 – 6.9)7.8 ± 0.5 (6.8 – 8.3)62. ± 0.5 (5.6 – 7.1)
Lip height2.4 ± 0.6 (1.6 – 3.4)1.8 ± 0.2 (1.5 – 2)2.4 ± 0.3 (2 – 3)2 ± 0.2 (1.7 – 2.7)2.4 ± 0.3 (2.1 – 3.1)1.6 ± 0.2 (1.5 – 2.0)
S17.8 ± 1.3 (15.2 – 19.5)16 ± 0.7 (14.8 – 17)16 ± 0.6 (14.6 – 16.7)15 ± 0.4 (14.3 – 15.7)16.1 ± 0.7 (14.6 – 17.7)14.8 ± 0.5 (14.1 – 15.7)
Knob width4 ± 0.5 (3.4 – 5.1)3 ± 0.2 (2.8 – 3.2)----
Knob height2.5 ± 0.3 (1.8 – 2.7)2 ± 0.2 (1.7 – 2.2)----
DGO3.32 ± 0.78 (2.51 – 5.08)3.33 ± 0.36 (2.93 – 3.84)2.4 ± 0.4 (1.8 – 3.2)2.3 ± 0.3 (1.9 – 2.8)2.9 ± 2.1 (2.1 – 3.9)2.4 ± 0.2 (2.0 – 2.5)
Anterior distance to EP93.7 ± 5 (86.9 – 102.3)---89.3 ± 6.4 (76.3 – 98.5)80.8 ± 4.5 (72.2 – 88.9)
Anterior distance to the vulva480.9 ± 53.6 (398.4 – 582.7)-454.5 ± 37.8 (392.9 – 528.6)---
Anterior distance to anus/cloaca---40.6 ± 4.4 (32.4 – 52.9)--
Vulva distance to the posterior123.1 ± 11.8 (108.9 – 148.3)-----
Vulva distance to the anus92.6 ± 9.9 (79.8 – 110.8)-71.9 ± 11 (55.6 – 97.8)-90.5 ± 12.5 (60.6 – 121.2
t30.4 ± 2.8 (27.1 – 36.5)22.8 ± 2.1 (19.7 – 26)27.9 ± 3.5 (21.1 – 34.4)33.9 ± 5.3 (24.8 – 41)31.9 ± 3.2 (26.3 – 36.4)31.2 ± 3.3 (21.7 – 36.2)
W23.1 ± 1.5 (20.8 – 25.4)17.7 ± 1 (16.4 – 19)19.6 ± 2.2 (15.8 – 24.8)15.7 ± 0.9 (14.4 – 18.4)23.0 ± 2.1 (20.2 – 27.8)18.7 ± 1.2 (16.1 – 20.7)
Vulva body width20 ± 1.4 (17.9 – 22.1)-----
Anus/cloaca body width13 ± 1.8 (9.9 – 15.5)11.1 ± 0.9 (10 – 12.2)12.5 ± 1.7 (10.5 – 16)12 ± 1.1 (10 – 14.6)--

Plant parasitic nematodes collected from banana roots and soil in Turi, Kasihan, and Jetis, Yogyakarta Special Region

Nematode generaTuri (−7.776651, 110.376525)Kasihan (−7.813425, 110.324154)Jetis (−7.931242, 110.344991)

RootSoilRootSoilRootSoil
Pratylenchus--181.340--
Helicotylenchus-37.35.3-480120
Meloidogyne--3253.32424
Tylenchorinchus--16---
Radopholus8410.7----
DOI: https://doi.org/10.2478/helm-2025-0004 | Journal eISSN: 1336-9083 | Journal ISSN: 0440-6605
Language: English
Page range: 50 - 61
Submitted on: May 3, 2024
|
Accepted on: Mar 7, 2025
|
Published on: May 24, 2025
In partnership with: Paradigm Publishing Services
Publication frequency: Volume open

© 2025 N. A. Nurlaili, S. Indarti, N. S. Putra, A. Soffan, published by Slovak Academy of Sciences, Institute of Parasitology
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.