The genus Metarhabditis Tahseen, Hussain, Tomar, Shah and Jairajpuri, 2004 was proposed by Tahseen et al. (2004) under the family Rhabditidae Örley, 1880 with the type and only species Metarhabditis andrassyana Tahseen, Hussain, Tomar, Shah and Jairajpuri, 2004. This genus is characterized by having metastegostom with knobbed setose denticles and bursa bearing eight genital papillae. The genus was later revised by Sudhaus (2011) who transferred five species from the genera Rhabditis Dujardin, 1845 namely Rhabditis adenobia Poinar, 1971, R. blumi Sudhaus, 1974, R. costai Martins, 1985, R. freitasi Martins, 1985, and R. rainai Carta and Osbrink, 2005 and one species from Oscheius Andrássy, 1976 namely Oscheius amsactae Ali, Pervez, Andrabi, Sharma and Verma, 2011 into Metarhabditis. Recently, Abolafia and Peña-Santiago (2019a) described a new species, M. giennensis from Spain and provided a key for species identification. More recently, Tabassum et al. (2019) described other new species, M. longicaudata from Pakistan and its identity is discussed later in this paper.
One of the species recently transferred to the genus Metarhabditis is M. amsactae (Ali, Pervez, Andrabi, Sharma and Verma, 2011) Sudhaus, 2011. It is distinguished from all the other species of the genus by having large and robust posterior filiform part of the male tail (see keys to species identification provided by Abolafia and Peña-Santiago, 2019a). It was first described as Oscheius amsactae by Ali et al. (2011), who recovered some nematode specimens from a larva of the red-hairy caterpillar, Amsacta moori Butler (Lepidoptera: Arctiidae), collected in Kanpur, Uttar Pradesh, India. Since then, M. amsactae nematodes have been isolated from soil samples in different regions of India and Pakistan, many of them were previously identified as other species, however, such as Oscheius ciceri Shaheen, Ali and Asif, 2011, Oscheius hussainii Shaheen, Ali and Asif, 2011, Oscheius gingeri Pervez, Eapen, Devasahayan, and Jacob, 2012, and Oscheius amsactae Ali, Pervez, Andrabi, Sharma and Verma, 2011 and Metarhabditis longicaudata Tabassum, Salma and Nasir, 2019. Most of these studies, however, have characterized the species morphologically and morphometrically. Regarding molecular analysis, several Internal Transcribed Spacer (ITS) rDNA sequences, obtained from M. amsactae isolated in India, Philippines, and Pakistan have been deposited in the GenBank, but none of the nematode specimens used to obtain the sequences were morphologically characterized and vice versa. Hence, scanning electron microscopy images and reference molecular data for this species are still required. In this study, we therefore conducted the scanning electron microscopy (SEM) studies, and sequenced the ITS, and small-subunit (SSU) and large-subunit (LSU) rDNA of two M. amsactae isolated from Uttar Pradesh, India.
Materials and methods
Nematode sampling
A survey to obtain the nematodes was conducted in soils of the district Shamli (29.6189° N, 77.4329° E; 280 m altitude), Uttar Pradesh, India. This location has a semiarid and moderate-to-tropical monsoon (humid subtropical) predominant climate. The type of soil is sandy loam and loamy and the pH of soil samples ranged from 6.5 to 8.4. A total of eighty-nine soil samples were taken from meadows, pastures, agricultural fields, open fields, and orchards.
Each soil sample consisted of 1 kg of soil that was a mixture of five soil subsamples collected at 15 to 20 cm depth in five locations within each field (one sample from each corner of the field, and one from the center of the field). The soil was first made fine to remove any debris (i.e., rocks, pieces of wood or bark, leaves, etc.) and then moistened with distilled water using a spray bottle to facilitate the movement of nematodes. To recover insect-associated nematodes from these soil samples, the ‘Galleria mellonella baiting’ method and the White (1927) trap method modified (Bedding and Akhurst, 1975) were used. Seven 4th instar Galleria mellonella larvae were buried in 250 ml of autoclaved plastic containers filled with the collected soil up to the brim. The plastic containers were then covered with tissue paper and muslin cloth. The containers were inverted upside-down and stored in the dark in an incubator at 27 ± 2°C for 7 days. The plastic containers were checked daily to recover dead insect larvae. Insect cadavers were rinsed with double-distilled water (ddH2O) to remove soil particles and disinfected with 0.1% sodium hypochlorite before being placed on the modified White traps to obtain emerging infective juveniles. The White traps were incubated at 27 ± 2°C in an incubator and checked daily for the emergence of third-stage juveniles from the cadavers. Emerged third-stage juveniles migrate after 5 to 7 days to water surrounding the Petri dish and nematodes were collected regularly until nematode emergence ceased after 10 to 20 days (Bhat et al., 2018, 2019).
Emerged IJs were sterilized with 0.1% sodium hypochlorite and washed with ddH2O, and finally stored in tissue culture flasks at 15°C. Third-stage juveniles were used within seven days after emergence (Aasha et al., 2019; Bhat et al., 2020a).
Nematode morphology and morphometry
Nematode third-stage juveniles were surface-sterilized with 1% NaOCl. Then, greater wax moth (Galleria mellonella) larvae were injected with 100 juvenile nematodes in sterile Petri plates using a 1 ml of insulin syringe. The male, female, and juvenile (third-stage) nematode generation were recovered from White traps as described above. All nematode generations were heat-killed in Ringer’s solution and fixed in triethanolamine formalin (Courtney et al., 1955). Nematodes were infiltrated in glycerol by the Seinhorst method (Seinhorst, 1959) and processed further as described by Bhat et al. (2017). Briefly, the nematodes were kept in pure glycerol. Three females, specimens of five males, and 10 infective juvenile nematodes were mounted separately in a drop of glycerol on a clean glass slide. Paraffin wax was used to seal and to prevent the flattening of nematode specimens (Bhat et al. 2020b; Kajol et al., 2020). The morphology and morphometric analysis of the specimens was conducted using light compound microscope (Magnus MLX) and phase-contrast microscope (Nikon Eclipse 50i). Twenty specimens of adults (male and female) and 20 of juveniles were analyzed. Morphometric analyses were carried out with the aid of in-built software of the phase-contrast microscope (Nikon DS-L1). The best-preserved specimens were also photographed using a Nikon Eclipse 80i (Nikon, Tokyo, Japan) light microscope provided with differential interference contrast optics (DIC) and a Nikon Digital Sight DS-U1 camera. Micrographs were edited using Adobe® Photoshop® CS. Nematode species were identified based on morphological and morphometric characters using the key provided by Abolafia and Peña-Santiago (2019a). Demanian indices (de Man, 1881) and other ratios were calculated. The terminology used for the morphology of the stoma and spicules/gubernaculum follows the proposals by De Ley et al. (1995) and Abolafia and Peña-Santiago (2017), respectively.
Scanning electron microscopy (SEM)
For the SEM, male and female specimens preserved in glycerin were selected for observation and processed according to the Abolafia’s (2015) protocol. Thus, they were hydrated in distilled water, dehydrated in a graded mixture of ethanol-acetone series, critical point-dried with liquid carbon dioxide, and coated with gold. The mounts were examined with a Zeiss Merlin microscope (5 kV).
Nematode molecular characterization
Genomic DNA was isolated from approximately five hundred infective juvenile nematodes by using the Qiagen Blood and Tissue Analysis Kit following the manufacturer’s protocol. A fragment of the rDNA gene containing the ITS regions (ITS1, 5.8S, ITS2) was amplified using primers 18S: 5′-TTGATTACGTCCCTGCCCTTT-3′ (forward), and 26S: 5′-TTTCACTCGCCGTTACTAAGG-3′ (reverse) (Vrain et al., 1992). The fragment containing the D2/D3 regions of the 28S rDNA gene was amplified using primers D2F: 5′-CCTTAGTAACGGCGAGTGAAA-3′ (forward) and 536: 5′-CAGCTATCCTGAGGAAAC-3′ (reverse) (Nadler et al., 2006). The 18S rDNA was amplified using primers NEM18SF: 5′-CGCGAATRGCTCATTACAACAGC-3′ (forward) and NEM18SR: 5′-GGGCGGTATCTGATCGCC-3′ (reverse) (Floyd et al., 2005). The Polymerase Chain Reaction (PCR) protocol for ITS, 18S, and D2/D3 rDNA gene amplification followed was described by Bharti et al. (2020) and Suman et al. (2020). Briefly, PCR master mix consisted of ddH2O 16.8 μl, 10x PCR buffer 2.5 μl, dNTP mix (10 mM each) 0.5 μl, 1 μl of each forward and reverse primers, dream taq green DNA polymerase 0.2 μl, and 3 μl of DNA extract. The PCR profiles used were 1 cycle of 94°C for 3 min followed by 40 cycles of 94°C for 30 sec, 52°C for 30 sec for LSU (28S) rDNA or 55°C for 30 sec for ITS rDNA or 54°C for 30 sec for SSU (18S) rDNA, 72°C for 60 sec, and a final extension at 72°C for 10 min. PCR was followed by electrophoresis (45 min, 100 volts) of 5 μl of PCR product in a 1% TAE (Tris–acetic acid–EDTA) buffered agarose gel stained with ethidium bromide (Bhat et al., 2020c; Rana et al., 2020a). The amplified products were purified and Sanger sequenced in both directions by Bioserve Technologies Ltd. (Hyderabad, India). The obtained sequences were manually curated, trimmed, and submitted to the Center for Biotechnology Information (NCBI) under accession numbers, MT873043, MT872508, and MT872503 for ITS, 28S (D2/D3) and 18S rDNA regions, respectively for the isolate CJ6, and MT873044, MT872509, and MT872504 for the same respective genes for the isolate CJ13.
Sequence alignment and phylogenetic analyses
The sequences were edited and compared with those already present in GenBank using the Basic Local Alignment Search Tool (BLASTN) of the National Center for Biotechnology Information (NCBI) (Altschul et al., 1990). The newly obtained ribosomal LSU (D2/D3 rDNA), SSU (18S rDNA), and ITS (ITS1, 5.8S, ITS2) rDNA sequences were manually edited using BioEdit 7.2.6 (Hall, 1999) and aligned with other relevant segments of same rDNA gene sequences available in GenBank using Clustal W alignment in the program MEGA7 (Kumar et al., 2016). Poorly aligned regions were removed from the alignments using MEGA7. The base substitution model was evaluated using jModeltest2.1.10 (Darriba et al., 2012). Phylogenetic trees were elaborated using the Bayesian inference method as implemented in the program MrBayes 3.2.7 (Ronquist et al., 2012). For analysis in jModeltest, the HKY + I + G model was selected for the ITS tree, the GTR + I + G model was selected for the 18S tree, and the GTR + G was selected for the 28S tree. The selected models were initiated with a random starting tree and ran with the Markov chain Monte Carlo (MCMC) for 1 × 106 generations. The Bayesian tree was ultimately visualized using the FigTree program 1.4.4 (Rambaut, 2018). Heterorhabditis downesi (KU573061) was used as the outgroup and to root the trees for ITS1-5.8S-ITS2 rDNA tree, Myolaimus byersi (KU180676) for LSU rDNA tree, and M. byersi (KU180665) for SSU rDNA tree.
The details of all the nematode species used in the molecular and phylogenetic study, including their updated nomenclature, accession numbers of rDNA genes, isolation source, and origin of the sequences are given in Table 4.
Results
Insect-associated nematode isolation
Nematodes of four genera: Metarhabditis, Steinernema, Heterorhabditis, and Oscheius were recovered from the eighty-nine soil samples collected in this study. Two soil samples, taken around the rhizosphere of sugarcane (Saccharum officinarum L.) and groundnut (Arachis hypogaea L.), contained Metarhabditis nematodes. Five samples were found positive for the presence of Steinernema abbasi, two for the presence of Heterorhabditis indica, and two for the presence of Oscheius sp. The rest of the samples were found negative for the presence of insect-associated nematodes. In this study, we characterized Metarhabditis nematodes. Steinernema, Heterorhabditis, and Oscheius nematodes are characterized in other studies (Bhat et al., 2020c, Rana et al., 2020b).
Systematics
Metarhabditis amsactae
(Ali, Pervez, Andrabi, Sharma and Verma, 2011) Sudhaus, 2011.
Table 1.
Morphometrics of Metarhabditis amsactae (Ali, Pervez, Andrabi, Sharma and Verma, 2011) Sudhaus, 2011 from India.
| Characters | Female | Male | L3 | ||||||
|---|---|---|---|---|---|---|---|---|---|
| n | 20 | 20 | 20 | ||||||
| Body length (L) | 939 ± 119 (718-1135) | 800 ± 91 (653-999) | 383 ± 55 (305-475) | ||||||
| a (L/MBW) | 16.4 ± 2.7 (10.9-21.1) | 16.7 ± 2.0 (12.7-20.7) | 18.9 ± 2.0 (15.7-22.9) | ||||||
| b (L/NL) | 5.4 ± 0.6 (4.5-6.6) | 4.9 ± 0.5 (3.8-5.9) | 3.4 ± 0.5 (2.7-4.3) | ||||||
| c (L/T) | 10.9 ± 1.7 (8.7-14.0) | 13.7 ± 2.7 (9.8-20.9) | 7.5 ± 1.2 (6.0-10.2) | ||||||
| c′ (T/ABW) | 4.1 ± 0.6 (2.9-5.2) | 2.9 ± 0.5 (1.5-3.8) | 4.8 ± 1.0 (3.0-6.0) | ||||||
| V (VA/L × 100) | 51.2 ± 2.1 (46-56) | – | – | ||||||
| Lip region width | 7.9 ± 1.4 (5-11) | 7.1 ± 1.1 (6-10) | 3.3 ± 0.5 (2-5) | ||||||
| Stoma length | 18.4 ± 2.3 (14-22) | 17.1 ± 2.3 (13-21) | 12.8 ± 1.1 (11-15) | ||||||
| Stomatal tube width | 5.0 ± 0.4 (2.5-3.5) | 3.5 ± 0.7 (2.5-5.5) | ? | ||||||
| Pharyngeal corpus length | 74 ± 5.6 (68-98) | 68 ± 4.5 (58-76) | 35 ± 2.9 (30-42) | ||||||
| Metacorpus length | 31 ± 3.9 (24-36) | 30 ± 2.6 (24-33) | 22 ± 2.4 (19-27) | ||||||
| Isthmus length | 40 ± 5.5 (40-48) | 39 ± 2.5 (35-41) | 27 ± 2.6 (23-31) | ||||||
| Bulb length | 29 ± 2.3 (26-34) | 29 ± 2.6 (24-35) | 16.8 ± 2.8 (12-24) | ||||||
| Pharynx length | 175 ± 13.3 (156-195) | 166 ± 7.3 (141-175) | 101 ± 6.5 (88-112) | ||||||
| Nerve ring – anterior end | 123 ± 15.0 (98-153) | 112 ± 9.1 (92-125) | 69 ± 10.9 (53-92) | ||||||
| Excretory pore–anterior end (EP) | 137 ± 18.2 (110-166) | 130 ± 9.1 (113-144) | 78 ± 11.7 (56-103) | ||||||
| Deirid–anterior end | 133 ± 16.0 (110-167) | 125 ± 11.0 (107-147) | ? | ||||||
| Neck length (stoma + pharynx, NL) | 173 ± 15.0 (148-195) | 163 ± 8.3 (144-176) | 114 ± 6.1 (101-124) | ||||||
| Body width at neck base | 43 ± 5.2 (32-50) | 38 ± 4.2 (32-50) | 18.7 ± 2.9 (14-25) | ||||||
| Mid-body width (MBW) | 58 ± 10.4 (43-81) | 48 ± 7.2 (40-66) | 20.5 ± 3.3 (16-29) | ||||||
| Anterior genital branch or Testis | 260 ± 38.2 (192-372) | 198 ± 15 (188-222) | – | ||||||
| Posterior genital branch | 278 ± 27.5 (229-321) | – | – | ||||||
| Vagina length | 24.5 ± 4.1 (17-30) | – | – | ||||||
| Vulva–anterior end (VA) | 480 ± 64 (380-579) | – | – | ||||||
| Rectum length | 31 ± 6.4 (22-42) | – | 15.0 ± 4.0 (9-23) | ||||||
| Anal body width (ABW) | 22 ± 2.7 (16-28) | 20.9 ± 2.5 (17-27) | 11.2 ± 2.2 (9-17) | ||||||
| Tail length (T) | 87 ± 10.5 (68-101) | 63 ± 8.2 (49-62) | 52 ± 5.9 (48-58) | ||||||
| Spicules length | – | 41 ± 7.5 (34-49) | – | ||||||
| Gubernaculum length | – | 19.6 ± 3.5 (16-28) | – | ||||||
| Species | M. amsactae | M. amsactae | M. amsactae as O. ciceri | M. amsactae as O. hussainii | M. amsactae as O. gingeri | M. amsactae | M. amsactae as M. longicaudata | M. amsactae as M. rainai | Metarhabditis sp. as M. amsactae |
|---|---|---|---|---|---|---|---|---|---|
| Reference | Present study | Ali et al. (2011) | Shaheen et al. (2011) | Shaheen et al. (2011) | Pervez et al. (2012) | Asif et al. (2013) | Tabassum et al. (2019) | Tabassum et al. (2019) | Tabassum et al. (2019) |
| Country | India | India | India | India | India | India | Pakistan | Pakistan | Pakistan |
| Habitat | Rhizosphere of sugarcane and groundnut | Rhizosphere of mungbean | Rhizosphere of chickpea | Rhizosphere of pigeonpea | Rhizosphere of ginger | Decaying matter | Rhizosphere of mango tree | Decomposed guava fruit | Rhizosphere of chicko |
| L | 718-1,135 | 658-786 | 964-1,018 | 902-989 | 1,418-1,813 | 786-902 | 1,366-1,684 | 1,769-2,078 | 1,546-1,694 |
| a | 10.9-21.1 | 19.7-22.9 | 20.1-22.5 | 24.4-25.5 | 18.5-21.2 | 19.2-23.5 | 14.0-18.0 | 11.7-20.0 | 15.0-18.0 |
| b | 4.5-6.6 | 4.1-4.8 | 5.7-5.9 | 3.8-4.3 | 5.1-5.3 | 4.1-5.0 | 5.5-7.8 | 7.0-8.0 | 6.0-8.0 |
| c | 8.7-14.0 | 8.9-12.1 | 10.3-12.9 | 10.2-12.7 | 12.1-13.2 | 9.6-11.2 | 12.0-16.0 | 12.0-18.0 | 13.0-19.0 |
| c′ | 2.9-5.2 | 4.1-4.6 | 3.6-4.3 | 3.3-4.8 | 4.6 | 3.8-4.5 | 2.5.-4.4 | 4.0-8.0 | 3.0-4.0 |
| V | 46-56 | 50-58 | 43a | 42a | 51-60 | 51-55 | 48-56 | 49-58 | 50-54 |
| Lip region width | 5-11 | 7-8 | 8-11 | 6-8 | 8-12 | 9-10 | 11-15 | 12a | 12a |
| Stoma length | 14-22 | 16-18 | 18-19 | 22-23 | 19-21 | 20-25 | 22-28 | 26-30 | 22-26 |
| Corpus length | 68-98 | 96-115 | 92-100 | 133 | 95-170 | 50a | 62-106 | 57a | 42a |
| Isthmus length | 40-48 | 32-44 | 30-40 | 44-56 | 28-57 | 35-45 | 30a | 27a | 33a |
| Bulb length | 26-34 | 24-35 | 26-31 | 33-45 | 44a | 25-35 | 19a | 16a | 17a |
| Nerve ring-ant. end | 98-153 | 99-112 | 111-134 | 170-179 | 178-203 | 110-143 | 154-190 | 76a | 95a |
| Excretory pore-ant. end | 110-166 | 109-130 | 134-136 | 166-172 | 187-223 | 121-160 | 148-250 | 98a | 112a |
| Pharynx length | 156-195 | 159-178 | 167-176 | 220-225 | 189-284 | 177-218 | 206-265 | 250-279 | 218-247 |
| Mid-body width | 43-81 | 32-39 | 39-46 | 32-40 | 75-89 | 26-40 | 78-108 | 92-111 | 88-105 |
| Anal body width | 16-28 | 16-17 | 20-28 | 19-23 | 25-28 | 19-22 | 25-33 | 12-30 | 30-36 |
| Tail length | 68-101 | 65-80 | 75-96 | 77-87 | 115-129 | 81-100 | 94-112 | 100-148 | 84-132 |
| Species | M. amsactae | M. amsactae | M. amsactae as O. cicero | M. amsactae as O. hussainii | M. amsactae as O. gingeri | M. amsactae | M. amsactae as M. longicaudata | M. amsactae as M. rainai | Metarhabditis sp. as M. amsactae |
|---|---|---|---|---|---|---|---|---|---|
| Reference | Present study | Ali et al. (2011) | Shaheen et al. (2011) | Shaheen et al. (2011) | Pervez et al. (2012) | Asif et al. (2013) | Tabassum et al. (2019) | Tabassum et al. (2019) | Tabassum et al. (2019) |
| Country | India | India | Pakistan | Pakistan | India | India | Pakistan | Pakistan | Pakistan |
| Habitat | Rhizosphere of sugarcane and groundnut | Rhizosphere of mungbean | Rhizosphere of chickpea | Rhizosphere of pigeonpea | Rhizosphere of ginger | Decaying matter | Rhizosphere of mango tree | Descomposed guava fruit | Rhizosphere of chicko |
| L | 653-999 | 594-804 | 754-973 | 855-889 | 673-821 | 683-868 | 1,154-1,325 | 1,100-1,392 | 1,234-1,498 |
| a | 12.7-20.7 | 16.6-19.3 | 19.4-20.8 | 25.0.-28.0 | 18.3-24.0 | 18.1-21.7 | 14.4-19.4 | 15.0-24.0 | 14.0-20.0 |
| b | 3.8-5.9 | 4.0-5.0 | 5.0-5.6 | 3.83-3.89 | 4.32-5.3 | 4.3-4.5 | 5.3-6.6 | 4.0-6.0 | 6.0-8.0 |
| c | 9.8-20.9 | 10.7-17.8 | 13.6-16.7 | 13.9-13.6 | 11.5-16.7 | 11.5-13.7 | 14.9-19.0 | 23.0-37.0 | 16.0-20.0 |
| c′ | 1.5-3.8 | 2.6-2.8 | 2.1-2.7 | 3.2 | 2.8-3.1 | 2.5-3.0 | 2.1-3.7 | 1.0-2.0 | 2.0-3.0 |
| Lip region width | 6-10 | 7-8 | 8-11 | 6-8 | 7a | 9-10 | 11-14 | ? | ? |
| Stoma length | 13-21 | 15-17 | 19 | 22-23 | 17-19 | 18-20 | 20-28 | 24-28 | 20-24 |
| Corpus length | 58-76 | 81-109 | ? | 134 | 71-112 | 72a | ? | ? | ? |
| Isthmus length | 35-41 | 27-42 | ? | 44-56 | 21-38 | 27a | ? | ? | ? |
| Bulb length | 24-35 | 20-36 | ? | 33-45 | ? | 23a | ? | ? | ? |
| Nerve ring-ant. end | 92-125 | 79-108 | 116-136 | 149-179 | 90-114 | 100-127 | 143-185 | ? | ? |
| Excretory pore-ant. end | 113-144 | 87-114 | 127-138 | 155-168 | 110-142 | 119-141 | 137-179 | ? | ? |
| Pharynx length | 141-175 | 134-169 | 149-172 | 223-228 | 142-187 | 155-190 | 184-256 | 211-256 | 204-236 |
| Midbody width | 40-66 | 31-45 | 39-46 | 30-35 | 32-39 | 26-40 | 64-69 | 54-88 | 70-98 |
| Anal body width | 17-27 | 16-20 | 26-30 | 19-21 | 16-19 | 20-24 | 21-40 | 26-34 | 27-32 |
| Tail length | 49-62 | 41-55 | 55-58 | 61-65 | 43-59 | 58-67 | 62-76 | 32-56 | 66-78 |
| Spicules length (SL) | 34-49 | 31-36 | 35-44 | 41-44 | 24-27 | 33-39 | 40-46 | 32-60 | 42-60 |
| Gubernaculum length (GL) | 16-28 | 13-17 | 19-20 | 14-18 | 9-10 | 14-20 | 20-34 | 13-23 | 16-22 |
| GL/SL × 100 | 50-60 | 43-46 | 45-54 | 34-40 | 36 | 42-51 | 50-74 | 40 | 37-38 |
| GenBank accession number | ||||||
|---|---|---|---|---|---|---|
| Speciesa | 18S rDNA | 28S rDNA | ITS rDNA | Country | Isolation source | Reference |
| Ablechroiulus cristatus | EU196013 | EU195976 | USA | Unknown | Kiontke et al. (2007) | |
| Ablechroiulus dudichi | AF083012 | USA | Unknown | Fitch (unpublished) | ||
| Auanema rhodensis | EU196004 | USA | Unknown | Kiontke et al. (2007) | ||
| Buetschlinema nidrosiensis | EU196020 | USA | Unknown | Kiontke et al. (2007) | ||
| Bursilla belari | MK359049 | India | Soil | Palanisamy et al. (unpublished) | ||
| Bursilla sp. | EF990722 | USA | Unknown | Kiontke et al. (2007) | ||
| Caenorhabditis angaria | JN636068 | USA | Rotting fruits | Kiontke et al. (2011) | ||
| Caenorhabditis elegans | Z92784 | UK | Unknown | Sulston and Waterston (1998) | ||
| Caenorhabditis elegans | X03680 | USA | Unknown | Ellis et al. (1986) | ||
| Caenorhabditis sinica | JN636142 | USA | Rotting fruits | Kiontke et al. (2011) | ||
| Cephaloboides cf. armatus | EU196005 | USA | Unknown | Kiontke et al. (2007) | ||
| Crustorhabditis transita | EU195995 | USA | Unknown | Kiontke et al. (2007) | ||
| Cruznema tripartitum | U73449 | Unknown | Baldwin et al. (1997) | |||
| Diploscapter coronatus | AY593921 | Netherlands | Soil | Helder et al. (2006) | ||
| Diploscapter sp. | EU195959 | USA | Unknown | Kiontke et al. (2007) | ||
| Distolabrellus veechi | EF990725 | USA | Unknown | Kiontke et al. (2007) | ||
| Haematozoon subulatum | EU040125 | China | Soil | Li et al. (unpublished) | ||
| Haematozoon subulatum | AF083017 | USA | Unknown | Fitch (unpublished) | ||
| Haematozoon subulatum | EF990727 | USA | Unknown | Kiontke et al. (2007) | ||
| Heterorhabditis bacteriophora | KJ636408 | Netherlands | Unknown | van Megen (unpublished) | ||
| Heterorhabditis downesi | KU573061 | Ireland | Soil | Maher et al. (2016) | ||
| Heterorhabditis megidis | KJ636320 | Netherlands | Unknown | van Megen (unpublished) | ||
| Litoditis marina | AF083021 | USA | Unknown | Fitch (unpublished) | ||
| Litoditis marina | AM399053 | Belgium | Fucus sp. | Derycke et al. (2008a) | ||
| Litoditis marina | AM937053 | Greece | Decaying seaweeds | Derycke et al. (2008b) | ||
| Litoditis mediterranea | AF083020 | USA | Unknown | Fitch (unpublished) | ||
| Litoditis mediterranea | AM399068 | New Zealand | Unknown | Derycke et al. (2008a) | ||
| Mesorhabditis anisomorpha | AF083013 | USA | Unknown | Fitch (unpublished) | ||
| Mesorhabditis anisomorpha | EF990723 | USA | Unknown | Kiontke et al. (2007) | ||
| Mesorhabditis longespiculosa | EU196014 | EU195980 | USA | Unknown | Kiontke et al. (2007) | |
| Metarhabditis amsactae | MT872503, MT872504 | MT872508, MT872509 | MT873043, MT873044 | India | Soil | Present study |
| Metarhabditis amsactae | MT422254 | Philippines | Soil | Dichusa et al. (unpublished) | ||
| Metarhabditis amsactae | MT452472, MT452471 | Philippines | Soil | Sangcopan and Sumaya (unpublished) | ||
| Metarhabditis amsactae | MH392568, KY083045 KP834433, KP834432 | India | Soil | Chavan et al. (unpublished) | ||
| Metarhabditis amsactae | MK973071 | Pakistan | Soil | Tabassum et al. (unpublished) | ||
| Metarhabditis blumi | U13935 | Germany | Unknown | Fitch et al. (1995) | ||
| Metarhabditis blumi | MT043860 | Philippines | Soil | Andalan et al. (unpublished) | ||
| Metarhabditis blumi | MF989442 | Colombia | Bos indicus | Chaves et al. (unpublished) | ||
| Metarhabditis blumi | MT012150 | Philippines | Soil compost | Guadalquiver (unpublished) | ||
| Metarhabditis blumi | MN453373 | India | Soil | Kandhasamy and Muthugounder (unpublished) | ||
| Metarhabditis blumi | EU195965 | USA | Unknown | Kiontke et al. (2007) | ||
| Metarhabditis blumi | KM233152, KM233153 | Brazil | Cow | Bossi et al. (2015) | ||
| Metarhabditis blumi | DQ121436 | South Africa | Unknown | Jumba and Gray (unpublished) | ||
| Metarhabditis rainai | MT012135, MT012133 | Philippines | Soil | Kabalu et al. (unpublished) | ||
| Metarhabditis rainai | MT012153 | Philippines | Soil | Buldiman et al. (unpublished) | ||
| Metarhabditis rainai | JQ237848 | USA | Citrus groves | Campos-Herrera et al. (2012) | ||
| Metarhabditis rainai | AF083008 | USA | Unknown | Fitch (unpublished) | ||
| Metarhabditis rainai | EU195966 | USA | Unknown | Kiontke et al. (2007) | ||
| Metarhabditis rainai | KR011843, KR011846 | Brazil | Soil | de Brida et al. (2017) | ||
| Metarhabditis sp. | MK973071 | Pakistan | Soil | Tabassum et al. (unplublished) | ||
| Myolaimus byersi | KU180665 | KU180676 | Sweden | Unknown | Holovachov et al. (2015) | |
| Oscheius carolinensis | FJ547240 | FJ547239 | USA | Vermicompost | Ye et al. (2010) | |
| Oscheius chongmingensis | EF503692 | China | Soil | Zhang et al. (2008) | ||
| Oscheius chongmingensis | EU273599 | China | Soil | Liu et al. (2012) | ||
| Oscheius chongmingensis | MT548593 | China | Spodoptera frugiperda | Li et al. (unpublished) | ||
| Oscheius colombianus | AY751546 | Colombia | Cyrtomenus bergi | Stock et al. (2005) | ||
| Oscheius dolichura | EU196010 | USA | Unknown | Kiontke et al. (2007) | ||
| Oscheius dolichuroides | AF082998 | USA | Unknown | Fitch (unpublished) | ||
| Oscheius dolichuroides | EU195970 | USA | Unknown | Kiontke et al. (2007) | ||
| Oscheius guentheri | EU196022 | USA | Unknown | Kiontke et al. (2007) | ||
| Oscheius indicus | MF441252 | India | Soil | Kumar et al. (2019) | ||
| Oscheius insectivorus | AF083019 | USA | Unknown | Fitch (unpublished) | ||
| Oscheius insectivorus | EU195968 | USA | Unknown | Kiontke et al. (2007) | ||
| Oscheius myriophilus | AY602176 | USA | Unknown | Kiontke et al. (2004) | ||
| Oscheius myriophilus | MG742117 | Thailand | Soil | Nitjarunkul et al. (unpublished) | ||
| Oscheius myriophilus | U13936 | USA | Soil | Fitch et al. (1995) | ||
| Oscheius necromenus | KT884894 | Australia | Oncocladosoma castaneum | Carta et al. (2018) | ||
| Oscheius onirici | MG551687 | Portugal | Unknown | Campos-Herrera (unpublished) | ||
| Oscheius onirici | LN613263 | Italy | Soil | Torrini et al. (2015) | ||
| Oscheius rugaoensis | JQ002566 | China | Soil | Zhang et al. (2012) | ||
| Oscheius rugaoensis | KT884891 | Japan | Chamberlinius hualienensis | Carta et al. (2018) | ||
| Oscheius saproxylicus | MK959600 | MK959601 | Spain | Decaying wood | Abolafia and Pena-Santiago (2019b) | |
| Oscheius tipulae | EU195969 | USA | Unknown | Kiontke et al. (2007) | ||
| Oscheius tipulae | KP792649 | Brazil | Soil | Campos-Herrera and Pu˚ža (unpublished) | ||
| Parasitorhabditis obtusa | EF990724 | Germany | Bark beetles | Kiontke et al. (2007) | ||
| Parasitorhabditis obtuse | EU003189 | USA | Unknown | Kiontke et al. (2007) | ||
| Pellioditis typica | AF036946 | Kenya | Feces of an antelope | Adams et al. (1998) | ||
| Pelodera pseudoteres | EU196023 | EU195997 | USA | Unknown | Kiontke et al. (2007) | |
| Pelodera teres | AF083002 | USA | Unknown | Fitch (unpublished) | ||
| Pelodera teres | EU195979 | USA | Unknown | Kiontke et al. (2007) | ||
| Phasmarhabditis hermaphrodita | DQ639980 | Scotland | Nemaslug | MacMillan et al. (2006) | ||
| Phasmarhabditis neopapillosa | DQ639982 | Scotland | Arion ater | MacMillan et al. (2006) | ||
| Phasmarhabditis papillosa | KX267675 | South Africa | Deroceras reticulatum | Pieterse et al. (2017) | ||
| Poikilolaimus floridensis | AB370214 | USA | Termites | Kanzaki et al. (2009) | ||
| Poikilolaimus oxycercus | AF083023 | USA | Unknown | Fitch (unpublished) | ||
| Poikilolaimus oxycercus | EU195984 | USA | Unknown | Kiontke et al. (2007) | ||
| Poikilolaimus piniperdae | DQ059060 | Germany | Unknown | Hong et al. (2005) | ||
| Poikilolaimus regenfussi | AF083022 | USA | Unknown | Fitch (unpublished) | ||
| Poikilolaimus regenfussi | DQ059057 | Germany | Unknown | Hong et al. (2005) | ||
| Protorhabditis sp. | AF083001 | USA | Unknown | Fitch (unpublished) | ||
| Protorhabditis sp. | AY602168 | USA | Unknown | Kiontke et al. (2007) | ||
| Rhabditella axei | U13934 | Germany | Unknown | Fitch et al. (1995) | ||
| Rhabditella axei | AY602177 | USA | Unknown | Kiontke et al. (2004) | ||
| Rhabditis brassicae | EU196006 | USA | Unknown | Kiontke et al. (2007) | ||
| Rhabditis sp. | MN082353, MN082355 | Taiwan | Soil | Yang et al. (2020) | ||
| Rhabditoides inermis | AF082996 | Unknown | Fitch (unpublished) | |||
| Rhabditoides regina | EF990726 | USA | Unknown | Kiontke et al. (2007) | ||
| Rhomborhabditis regina | KX385908 | Mexico | White grub | Jiménez-Cortés et al. (2016) | ||
| Teratorhabditis mariannae | EF990716 | EF990721 | USA | Soil compost | Kanzaki et al. (2008) | |
| Teratorhabditis palmarum | U13937 | USA | Unknown | Fitch et al. (1995) | ||





