Genome Announcement: The Draft Genomes of Two Radopholus similis populations from Costa Rica

Assembly Statistic	Population (Rv)^a	Population (Rd)^b	ASM476467v1^c
Size (bp)	50,555,211	50,089,881	65,195,707
Number of Scaffolds	5,194	6,195	8,133
Largest Scaffold (bp)	159,742	174,442	502,931
GC Content (%)	47.06	47.11	51.64
N50 Value (bp)	27,798	20,071	13,529
No. Contigs > 5,000 bp	2,081	2,476	3,451
No. Contigs > 10,000 bp	1,468	1,587	1,726
No. Contigs > 25,000 bp	618	499	419
No. Contigs > 50,000 bp	167	95	83
Complete BUSCOs	588 (59.9%)	593 (60.4%)	585 (59.5%)
Complete and single-copy BUSCOs	573 (58.4%)	577 (58.8%)	564 (57.4%)
Complete and duplicated BUSCOs	15 (1.5%)	16 (1.6%)	21 (2.1%)
Fragmented BUSCOs	93 (9.5%)	95 (9.7%)	85 (8.7%)
Missing BUSCOs	301 (30.6%)	294 (29.2%)	312 (31.8%)

References

Authors

Metrics

Articles in this issue

DOI: https://doi.org/10.21307/jofnem-2019-052 | Journal eISSN: 2640-396X | Journal ISSN: 0022-300X

Journal RSS Feed

Language: English

Page range: 1 - 4

Published on: Sep 17, 2019

Published by: Society of Nematologists, Inc.

In partnership with: Paradigm Publishing Services

Publication frequency: 1 issue per year

Keywords:

Related subjects:

© 2019 Catherine L. Wram, Cedar N. Hesse, Sulochana K. Wasala, Dana K. Howe, Amy B. Peetz, Dee R. Denver, Danny Humphreys-Pereira, Inga A. Zasada, published by Society of Nematologists, Inc.
This work is licensed under the Creative Commons Attribution 4.0 License.

Volume 51 (2019): Issue 1 (January 2019)