Have a personal or library account? Click to login

New data on known species of Hirschmanniella and Pratylenchus (Rhabditida, Pratylenchidae) from Iran and South Africa

Journal of Nematology
Volume 51 (2019): Issue 1 (January 2019)
By:
Open Access
|Aug 2019

References

  1. Abdel-Rahman F. and Maggenti A. R. 1987. Hirschmanniella pomponiensis n. sp. (Nemata: Pratylenchidae), parasitic on bulrush, Scirpus robustus Pursh. Journal of Nematology 19: 147–51.
    Back to article
  2. Abolafia J. 2015. A low-cost technique to manufacture a container to process meiofauna for scanning electron microscopy. Microscopy Research and Technique 78: 771–6.10.1002/jemt.2253826178782
    Back to article
  3. Addinsoft . 2007. XLSTAT, Analyse de données et statistique avec MS Excel, Addinsoft, New York.
    Back to article
  4. Araya T. Z. , Peraza-Padilla W. , Archidona-Yuste A. , Cantalapiedra-Navarrete C. , Liébanas G. , Palomares-Rius J. E. and Castillo P. 2016. Root-lesion nematodes of the genus Pratylenchus (Nematoda: Pratylenchidae) from Costa Rica with molecular identification of P. gutierrezi and P. panamaensis topotypes. European Journal of Plant Pathology 145: 973–98.10.1007/s10658-016-0884-z
    Back to article
  5. Bert W. and Geraert E. 2000. Nematode species of the order Tylenchida, new to the Belgian Nematofauna with additional morphological data. Belgian Journal of Zoology 130: 47–57.
    Back to article
  6. Blaxter M. L. , De Ley P. , Garey G. R. , Liu L. X. , Scheldeman P. , Vierstraete A. , Vanfleteren J. R. , Mackey L. Y. , Dorris M. , Frisse L. M. , Vida J. T. and Thomas W. K. 1998. A molecular evolutionary framework for the phylum Nematoda. Nature 392: 71–5.10.1038/321609510248
    Back to article
  7. Braun A. L. and Loof P. A. A. 1966. Pratylenchoides laticauda n. sp., a new endoparasitic phytonematode. Netherlands Journal of Plant Pathology 72: 241–5.
    Back to article
  8. Castillo P. and Vovlas N. 2007. Pratylenchus (Nematoda: Pratylenchidae): diagnosis, biology, pathogenicity and management. Nematology Monographs and Perspectives 6: 529 pp.10.1163/ej.9789004155640.i-523
    Back to article
  9. Chen D. Y. , Ni H. F. , Yen J. H. , Chen R. S. and Tsay T. T. 2006. Distribution of rice root nematode Hirschmanniella oryzae and a new recorded H. mucronata (Nematoda: Pratylenchidae) in Taiwan. Plant Pathology Bulletin 15: 197–210.
    Back to article
  10. Darriba D. , Taboada G. L. , Doallo R. and Posada D. 2012. jModelTest 2: more models, new heuristics and parallel computing. Nature Methods 9: 772.
    Back to article
  11. Dasgupta D. R. , Raski D. J. and Sher S. A. 1968. A revision of the genus Rotylenchulus Linford and Oliveira, 1940 (Nematoda: Tylenchidae). Proceedings of the Helminthological Society of Washington 35: 169–92.
    Back to article
  12. De Grisse A. 1969. Redescription ou modifications de quelques techniques utilisées dans l’étude des nematodes phytoparasitaire. Mededelingen Rijksfaculteit der Landbouwwetenschappen Gent 34: 351–69.
    Back to article
  13. De Ley T. I. , Mundo-Ocampo M. , Yoder M. and De Ley P. 2007. Nematodes from vernal pools in the Santa Rosa Plateau Ecological Reserve, California I. Hirschmanniella santarosae sp. n. (Nematoda: Pratylenchidae), a cryptic sibling species of H. pomponiensis Abdel Rahman and Maggenti, 1987. Nematology 9: 405–29.
    Back to article
  14. De Luca F. , Troccoli A. , Duncan L. W. , Subbotin S. A. , Waeyenberge L. , Moens M. and Inserra R. N. 2010. Characterisation of a population of Pratylenchus hippeastri from bromeliads and description of two related new species, P. floridensis n. sp. and P. parafloridensis n. sp. from grasses in Florida. Nematology 12: 847–68.
    Back to article
  15. De Luca F. , Troccoli A. , Duncan L. W. , Subbotin S. A. , Waeyenberge L. , Coyne D. L. , Brentu F. C. and Inserra R. N. 2012. Pratylenchus speijeri n. sp. (Nematoda: Pratylenchidae), a new root-lesion nematode pest of plantain in West Africa. Nematology 14: 987–1004.
    Back to article
  16. De Man J. G. 1880. Die einheimischen, frei in der reinen Erde und im süssen Wasser lebenden Nematoden. Vorläufiger Bericht und descriptiv-systematischer Theil. Tijdschrift nederlandsche Dierkundige Vereeniging 5: 1–104.
    Back to article
  17. Derycke S. , Vanaverbeke G. , Rigaux A. , Backljau T. and Moens T. 2010. Exploring the use of Cytochrome Oxidase c Subunit 1 (COI) for DNA barcoding of free-living marine nematodes. Plos One 5: 1–9.10.1371/journal.pone.0013716296566521060838
    Back to article
  18. Divsalar N. , Shokoohi E. , Fourie H. , Hoseinipour A and Mahdikhani Moqaddam E. 2018. Morphological variation and molecular study of the root lesion nematode Pratylenchus thornei . Russian Journal of Nematology 26: 29–41.
    Back to article
  19. Ebsary B. A. and Anderson R. V. 1982. Two new species of Hirschmanniella Luc and Goodey, 1963 (Nematoda: Pratylenchidae) with a key to the nominal species. Canadian Journal of Zoology 60: 530–5.
    Back to article
  20. Filipjev I.N. 1936. On the classification of the Tylenchinae. Proceeding of The Helminthological Society of Washington 3: 80–2.
    Back to article
  21. Fortuner R. 1984. Morphometrical variability in Helicotylenchus Steiner, 1945. On the validity of ratios. Revue de Nématologie 7: 137–46.
    Back to article
  22. Fortuner R. 1990. Ratios and indexes in nematode taxonomy. Nematologica 36: 205–16.10.1163/002925990X00176
    Back to article
  23. Gu J. F. , Wang N. , He J. and Chen W. J. 2014. Identification of Pratylenchus hippeastri from imported seedlings. Plant Quarantine 28: 41–6.
    Back to article
  24. Guindon S. and Gascuel O. 2003. A simple, fast and accurate method to estimate large phylogenies by maximum-likelihood. Systematic Biology 52: 696–704.
    Back to article
  25. Hall T. A. 1999. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98NT. Nucleic Acids Symposium Series 41: 95–8.
    Back to article
  26. Inserra R. N. , Troccoli A. , Gozel U. , Bernard E. C. , Dunn D. and Duncan L. 2007. Pratylenchus hippeastri n. sp. (Nematoda: Pratylenchidae) from amaryllis in Florida with notes on P. scribneri and P. hexincisus . Nematology 9: 25–42.10.1163/156854107779969754
    Back to article
  27. Jahanshahi Afshar F. , Pourjam E. and Kheiri A. 2006. Tylenchida associated with fruit trees in Jiroft with four new records for Iranian nematofauna. Iranian Journal of Agricultural Science 3: 529–43, (in Persian).
    Back to article
  28. Jones J. T. , Haegeman A. , Danchin E. G. J. , Gaur H. S. , Helder J. , Jones M. G. K. , Kikuchi T. , Manzanilla-lópez R. , Palomares-rius J. E. , Wesemael W. M. I. and Perry R. N. 2013. Top 10 plant-parasitic nematodes in molecular plant pathology. Molecular Plant Pathology 14: 946–61.10.1111/mpp.12057663876423809086
    Back to article
  29. Khan M. R. and Bala S. C. 2003. Morphometric variations in Hirschmanniella mucronata and H. oryzae from West Bengal. International Journal of Nematology 13: 225–8.
    Back to article
  30. Khun K. , Decraemer W. , Couvreur M. , Karssen G. , Steel H. and Bert W. 2015. Deceptive morphological variation in Hirschmanniella mucronata (Nematoda: Pratylenchidae) and a polytomous key to the genus. Nematology 17: 377–400.10.1163/15685411-00002867
    Back to article
  31. Lin Y. Y. 1970. Studies on the rice root parasitic nematodes in Taiwan. Journal of Agriculture and Forestry, Chung-Hasing 19: 13–27.
    Back to article
  32. Loof P. A. A. 1991. The family Pratylenchidae Thorne, 1949 in Nickle W. R. (Ed.). Manual of agricultural nematology. Marcel Dekker, New York, NY, pp. 363–421.
    Back to article
  33. Luc M. and Goodey J. B. 1964. Hirschmanniella nom. nov. for Hirschmannia , Nematologica, 9: 471.
    Back to article
  34. Majd Taheri Z. , Tanha Maafi Z. , Subbotin S. A. , Pourjam E. and Eskandari A. 2013. Molecular and phylogenetic studies on Pratylenchidae from Iran with additional data on Pratylenchus delattrei, Pratylenchoides alkani and two unknown species of Hirschmanniella and Pratylenchus . Nematology 15: 1–19.
    Back to article
  35. Múnera G. E. , Bert W. and Decraemer W. 2009. Morphological and molecular characterisation of Pratylenchus araucensis n. sp. (Pratylenchidae), a root-lesion nematode associated with Musa plants in Colombia. Nematology 11: 799–813.
    Back to article
  36. Nguyen T. T. 2010. A comparative polyphasic study of 10 Pratylenchus coffeae populations from Vietnam, PhD dissertation, Catholic University of Leuven, p. 141.
    Back to article
  37. Perry R. N. and Moens M. (Eds). 2013. Plant nematology, 2nd ed., CABI Publishing, Wallingford and Boston, MA: 536.
    Back to article
  38. Pourjam E. , Geraert E. and Alizadeh A. 2000. Some pratylenchids from Iran (Nematoda: Tylenchina). Nematology 2: 855–69.10.1163/156854100750112806
    Back to article
  39. Ronquist F. and Huelsenbeck J. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572–4.10.1093/bioinformatics/btg18012912839
    Back to article
  40. Ryss A. Y. 2002. Phylogeny and evolution of the genus Pratylenchus according to morphological data (Nematoda: Tylenchida). Zoosystematica Rossica 10: 257–73.10.31610/zsr/2001.10.2.257
    Back to article
  41. Sher S. A. 1968. Revision of the genus Hirschmanniella Luc & Goodey 1963 (Nematoda–Tylenchoidea). Nematologica 14: 243–75.10.1163/187529268X00471
    Back to article
  42. Sherbakoff C. D. and Stanley W. W. 1943. The more important diseases and insect pests of crops in Tennessee. Tennessee Agriculture Experiment Station Bulletin 186: 1–142.
    Back to article
  43. Shokoohi E. 2013. Molecular analysis of Zygotylenchus guevarai (Tobar Jimenez, 1963) Braun and Loof, 1966 based on sequence of the 28S rDNA. 8th National Biotechnology Congress of Iran and 4th National Biosafety Congress of Iran, Tehran University, (In Persian, English abstract) 6–8 July 2013, Tehran, Iran.
    Back to article
  44. Shokoohi E. , Marais M. , Fourie H. and Panahi H. 2018. Morphological and molecular characterization of three Helicotylenchus species from Iran. Zootaxa 4388(2):207–20.10.11646/zootaxa.4388.2.429690453
    Back to article
  45. Steiner G. 1945. Helicotylenchus, a new genus of plant-parasitic nematodes and its relationship to Rotylenchus Filipjev. Proceedings of the Helminthological Society of Washington 12: 34–8.
    Back to article
  46. Straube D. and Juen A. 2013. Storage and shipping of tissue samples for DNA analyses: a case study on earthworms. European Journal of Soil Biology 57: 13–8.10.1016/j.ejsobi.2013.04.001446118026109838
    Back to article
  47. Sturhan D. and Hallmann J. 2010. The genus Hirschmanniella (Tylenchida: Pratylenchidae) in Europe, with description of H. halophila sp. n. from Germany and notes on H. caudacrena . Nematology 12: 809–26.
    Back to article
  48. Subbotin S. A. , Waeyenberge L. , Molokanova I. A. and Moens M. 1999. Identification of Heterodera avenae group species by morphometrics and rDNA-RFLPs. Nematology 1: 195–207.10.1163/156854199508018
    Back to article
  49. Subbotin S. A. , Sturhan D. , Chizhov V. N. , Vovlas N. and Baldwin J. G. 2006. Phylogenetic analysis of Tylenchida Thorne, 1949 as inferred from D2 and D3 expansion fragments of the 28S rRNA gene sequences. Nematology 8: 455–74.
    Back to article
  50. Suzuki R. and Shimodaira H. 2015. pvclust: hierarchical clustering with P-values via multiscale bootstrap resampling, R package version 2.0-0, available at: http://CRAN.R-project.org/packageDpvclust[Access date October 23, 2015].
    Back to article
  51. Thompson J. D. , Higgins D. G. and Gibson T. J. 1994. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Research 22: 4673–80.
    Back to article
  52. Tobar Jiménez A. 1963. Pratylenchoides guevarai n. sp., nuevo nematode tylènchido, relacionado con el ciprés (Cupressus sempervirens L.). Revista Ibérica de Parasitología 22: 27–36.
    Back to article
  53. Van Breda de Haan J. 1902. Een aalties-ziekte der rijst, ‘omo menték’ of ‘omo bambang’. Mededelingen uits,s Land Plantentuin 53: 1–65.
    Back to article
  54. Van den Berg E. , Subbotin S. A. , Handoo Z. A. and Tiedt L. R. 2009. Hirschmanniella kwazuna sp. n. from South Africa with notes on a new record of H. spinicaudata (Schuurmans Stekhoven, 1944) Luc and Goodey, 1964 (Nematoda: Pratylenchidae) and on the molecular phylogeny of Hirschmanniella Luc and Goodey, 1964. Nematology 11: 523–40.
    Back to article
  55. Van Megen H. , Van Den Elsen S. , Holterman M. , Karssen G. , Mooyman P. , Bongers T. , Holovachov O. , Bakker J. and Helder J. 2009. A phylogenetic tree of nematodes based on about 1200 full-length small subunit ribosomal DNA sequences. Nematology 11: 927–50.10.1163/156854109X456862
    Back to article
  56. Vrain T. C. , Wakarchuk D. A. , Levesque A. C. and Hamilton R. I. 1992. Intraspecific rDNA restriction fragment length polymorphism in the Xiphinema americanum group. Fundamental and Applied Nematology 15: 563–73.
    Back to article
  57. Wang H. , Zhuo K. and Liao J. 2016. Morphological and molecular characterization of Pratylenchus hippeastri, a new record of root-lesion nematode associated with apple in China. Pakistan Journal of Zoology 48: 665–71.
    Back to article
  58. Whitehead A. and Hemmings J. 1965. A comparison of some quantitative methods of extracting small vermiform nematodes from soil. Annuals of Applied Biology 55: 25–38.10.1111/j.1744-7348.1965.tb07864.x
    Back to article
DOI: https://doi.org/10.21307/jofnem-2019-041 | Journal eISSN: 2640-396X | Journal ISSN: 0022-300X
Journal RSS Feed
Language: English
Page range: 1 - 26
Submitted on: Mar 26, 2019
Published on: Aug 5, 2019
Published by: Society of Nematologists, Inc.
In partnership with: Paradigm Publishing Services
Publication frequency: 1 issue per year
Keywords:
Iran,
Morphometric,
mtDNA,
Phylogeny,
Root-lesion nematode,
rDNA,
South Africa
Related subjects:
Life sciences,
Life sciences, other

© 2019 Ebrahim Shokoohi, Joaquín Abolafia, Phatu William Mashela, Nafiseh Divsalar, published by Society of Nematologists, Inc.
This work is licensed under the Creative Commons Attribution 4.0 License.

Previous articleVolume 51 (2019): Issue 1 (January 2019)Next article