The Draft Genome of Deladenus siricidicola

Sequencing type	Library name/files	Library type	Read length	Number of reads	GC content (%)	Approximate coverage of genome	Trimmomatic parameters*
Illumina HiSeq	121119_SN1126_M_L001_GSA-35_R1.NoAdaptPR.fastq	Paired end	250 bp	13,126,801	35	27×	HEADCROP: 10 CROP: 240 LEADING: 30 TRAILING: 30 MINLEN: 200
	121119_SN1126_M_L001_GSA-35_R2.NoAdaptPR.fastq	Paired end	250 bp	13,126,801	35	27×	HEADCROP: 10 CROP: 240 LEADING: 30 TRAILING: 30 MINLEN: 200
Illumina MiSeq	AlisaPostma_S2_L001_R1_001.fastq	Paired end	250 bp	3,845,668	41	8×	HEADCROP: 10 CROP: 160 LEADING: 30 TRAILING: 30 MINLEN: 100
	AlisaPostma_S2_L001_R2_001.fastq	Paired end	250 bp	3,845,668	41	8×	HEADCROP: 10 CROP: 160 LEADING: 30 TRAILING: 30 MINLEN: 100
	Deladenus_S1_L001_R1_001.fastq	Paired end	250 bp	4,996,896	38	10×	HEADCROP: 5 CROP: 230 LEADING: 30 TRAILING: 30 MINLEN: 200
	Deladenus_S1_L001_R2_001.fastq	Paired end	250 bp	4,996,896	39	10×	HEADCROP: 5 CROP: 230 LEADING: 30 TRAILING: 30 MINLEN: 200
Illumina HiSeq	140528_SND104_B_L008_GSA-39_R1.RD30.NotEmpty.LinkerTrimmed-50bp-PR.fastq	Mate pair	50 bp	4,076,324	39	3×	HEADCROP: 5 LEADING: 30 TRAILING: 30 MINLEN: 35
	140528_SND104_B_L008_GSA-39_R2.RD30.NotEmpty.LinkerTrimmed-50bp-PR.fastq	Mate pair	50 bp	4,076,324	39		HEADCROP: 5 LEADING: 30 TRAILING: 30 MINLEN: 35
	140528_SND104_B_L008_GSA-40_R1.RD30.NotEmpty.LinkerTrimmed-50bp-PR.fastq	Mate pair	50 bp	9,097,316	37	7×	HEADCROP: 5 LEADING: 30 TRAILING: 30 MINLEN: 35
	140528_SND104_B_L008_GSA-40_R2.RD30.NotEmpty.LinkerTrimmed-50bp-PR.fastq	Mate pair	50 bp	9,097,316	37		HEADCROP: 5 LEADING: 30 TRAILING: 30 MINLEN: 35

1 Notes: *All Illumina libraries were subjected to the same Illuminaclip parameters: using a specified adapter file, trimmomatic searched for seed matches allowing maximally two mismatches. These seeds were extended and clipped if a paired read scored 30 or a single read scored 10.

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DOI: https://doi.org/10.21307/jofnem-2019-036 | Journal eISSN: 2640-396X | Journal ISSN: 0022-300X

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Language: English

Page range: 1 - 4

Submitted on: Feb 16, 2019

Published on: Jul 29, 2019

Published by: Society of Nematologists, Inc.

In partnership with: Paradigm Publishing Services

Publication frequency: 1 issue per year

Keywords:

Biological control,

Deladenus siricidicola ,

Entomoparasitic nematode,

Genome,

Sirex noctilio

Related subjects:

Life sciences,

Life sciences, other

© 2019 Alisa Postma, X. Osmond Mlonyeni, Frederick Clasen, Fourie Joubert, Bernard Slippers, published by Society of Nematologists, Inc.
This work is licensed under the Creative Commons Attribution 4.0 License.

Volume 51 (2019): Issue 1 (January 2019)