References
- Cotton, J. A., Lilley, C. J., Jones, L. M., Kikuchi, T., Reid, A. J., Thorpe, P., Tsai, I. J., Beasley, H., Blok, V., Cock, P. J. A., Eves-van den Akker, S., Holroyd, N., Hunt, M., Mantelin, S., Naghra, H., Pain, A., Palomares-Rius, J. E., Zarowiecki, M., Berriman, M., Jones, J. T., and Urwin, P. E. 2014. The genome and life-stage specific transcriptomes of Globodera pallida elucidate key aspects of plant parasitism by a cyst nematode. Genome Biology 15:R43.
- Eves-van den Akker, S., Laetsch, D. R., Thorpe, P., Lilley, C. J., Danchin, E. G., Da Rocha, M., Rancurel, C., Holroyd, N. E., Cotton, J. A., Szitenberg, A., Grenier, E., Montarry, J., Mimee, B., Duceppe, M. O., Boyes, I., Marvin, J. M., Jones, L. M., Yusup, H. B., Lafond-Lapalme, J., Esquibet, M., Sabeh, M., Rott, M., Overmars, H., Finkers-Tomczak, A., Smant, G., Koutsovoulos, G., Blok, V., Mantelin, S., Cock, P. J., Phillips, W., Henrissat, B., Urwin, P. E., Blaxter, M., and Jones, J. T. 2016. The genome of the yellow potato cyst nematode, Globodera rostochiensis, reveals insights into the basis of parasitism and virulence. Genome Biology 17:124.
- Finn, R. D., Bateman, A., Clements, J., Coggill, P., Eberhardt, R. Y., Eddy, S. R., Heger, A., Hetherington, K., Holm, L., Mistry, J., Sonnhammer, E. L., Tate, J., and Punta, M. 2014. Pfam: the protein families database. Nucleic Acids Research 42:D222–D230.
- Grabherr, M. G., Haas, B. J., Yassour, M., Levin, J. Z., Thompson, D. A., Amit, I., Adiconis, X., Fan, L., Raychowdhury, R., Zeng, Q., Chen, Z., Mauceli, E., Hacohen, N., Gnirke, A., Rhind, N., di Palma, F., Birren, B. W., Nusbaum, C., Lindblad-Toh, K., Friedman, N., and Regev, A. 2011. Full-length transcriptome assembly from RNA-Seq data without a reference genome. Nature Bio-technology 29:644–652.
- Handoo, Z. A., Carta, L. K., Skantar, A. M., and Chitwood, D. J. 2012. Description of Globodera ellingtonae n. sp (Nematoda: Heteroderidae) from Oregon. Journal of Nematology 44:40–57.
- Parra, G., Bradnam, K., and Korf, I. 2007. CEGMA: a pipeline to accurately annotate core genes in eukaryotic genornes. Bio-informatics 23:1061–1067.