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Modelowe badania mikrobiomu świń według koncepcji wspólnego zdrowia „One Health” ludzi i zwierząt Cover

Modelowe badania mikrobiomu świń według koncepcji wspólnego zdrowia „One Health” ludzi i zwierząt

Open Access
|May 2021

References

  1. Aluthge N.D., van Sambeek D.M, Carney-Hinkle E.E., Li Y.S., Fernando S.C., Burkey T.E.: The pig microbiota and the potential for harnessing the power of the microbiome to improve growth and health. J. Anim. Sci., 2019; 97: 3741–3757
  2. Behjati S., Tarpey P.S.: What is next generation sequencing? Arch. Dis. Child. Educ. Pract. Ed., 2013; 98: 236–238
  3. Bergamaschi M., Maltecca C., Schillebeeckx C., McNulty N.P., Schwab C., Shull C., Fix J., Tiezzi F.: Heritability and genome-wide association of swine gut microbiome features with growth and fatness parameters. Sci. Rep., 2020; 10: 10134
  4. Besser J., Carleton H.A., Gerner-Smidt P., Lindsey R.L., Trees E.: Next-generation sequencing technologies and their application to the study and control of bacterial infections. Clin. Microbiol. Infect., 2018; 24: 335–341
  5. Binek M.: Mikrobiom człowieka – zdrowie i choroba. Post. Mikrob., 2012; 51: 27–36
  6. Bischoff S.C.: Gut health: A new objective in medicine? BMC Med., 2011; 9: 24
  7. Cao Y., Fanning S., Proos S., Jordan K., Srikumar S.: A review on the applications of next generation sequencing technologies as applied to food-related microbiome studies. Front. Microbiol., 2017; 8: 1829
  8. Crespo-Piazuelo D., Migura-Garcia L., Estellé J., Criado-Mesas L., Revilla M., Castelló A., Muñoz M., García-Casco J.M., Fernández A.I., Ballester M., Folch J.M.: Association between the pig genome and its gut microbiota composition. Sci. Rep., 2019; 9: 8791
  9. Delia E., Tafaj M., Männer K.: Efficiency of probiotics in farm animals. W: Probiotic in Animals, red.: E. Rigobelo. IntechOpen, 2012, 256–267
  10. Ferris M.J., Muyzer G., Ward D.M.: Denaturing gradient gel electrophoresis profiles of 16S rRNA-defined populations inhabiting a hot spring microbial mat community. Appl. Environ. Microbiol., 1996; 62: 340–346
  11. Flint H.J., Duncan S.H., Scott K.P., Louis P.: Links between diet, gut microbiota composition and gut metabolism. Proc. Nutr. Soc., 2015; 74: 13–22
  12. Foo J.L., Ling H., Lee Y.S., Chang M.W.: Microbiome engineering: Current applications and its future. Biotechnol. J., 2017: 12: e1600099
  13. Guz K., Orzińska A., Michalewska B., Pelc-Kłopotowska M., Brojer E., Łętowska M.: Molecular biology methods for blood cell antigen genotyping in reference laboratories. J. Transf. Med., 2019; 12: 199–205
  14. Holman D.B., Brunelle B.W., Trachsel J., Allen H.K.: Meta-analysis to define a core microbiota in the swine gut. mSystems., 2017; 2: e00004–17
  15. Hu Y., Yang X., Li J., Lv N., Liu F., Wu J., Lin I.Y., Wu N., Weimer B.C., Gao G.F., Liu Y., Zhu B.: The bacterial mobile resistome transfer network connecting the animal and human microbiomes. Appl. Environ. Microbiol., 2016; 82: 6672–6681
  16. Isaacson R., Kim H.B.: The intestinal microbiome of the pig. Anim. Health. Res. Rev., 2012; 13: 100–109
  17. Jiang J., Wang J., Wang H., Zhang Y., Kang H., Feng X., Wang J., Yin Z., Bao W., Zhang Q., Liu J.F.: Global copy number analyses by next generation sequencing provide insight into pig genome variation. BMC Genomics, 2014; 15: 593
  18. Kil D.Y., Swanson K.S.: Companion animals symposium: Role of microbes in canine and feline health. J. Anim. Sci., 2011; 89: 1498–1505
  19. Kim H.B., Borewicz K., White B.A., Singer R.S., Sreevatsan S., Tu Z.J., Isaacson R.E.: Longitudinal investigation of the age-related bacterial diversity in the feces of commercial pigs. Vet. Microbiol., 2011; 153: 124–133
  20. Kim H.B., Borewicz K., White B.A., Singer R.S., Sreevatsan S., Tu Z.J., Isaacson R.E.: Microbial shifts in the swine distal gut in response to the treatment with antimicrobial growth promoter, tylosin. Proc. Natl. Acad. Sci. USA, 2012; 109: 15485–15490
  21. Kraemer J.G., Ramette A., Aebi S., Oppliger A., Hilty M.: Influence of pig farming on the human nasal microbiota: Key role of air-borne microbial communities. Appl. Environ. Microbiol. 2018; 84: e02470–17
  22. Lankelma J.M., Nieuwdorp M., de Vos W.M., Wiersinga W.J.: The gut microbiota in internal medicine: Implications for health and disease. Neth. J. Med., 2015; 73: 61–68
  23. Li K., Xiao Y., Chen J., Chen J., He X., Yang H.: Microbial composition in different gut locations of weaning piglets receiving antibiotics. Asian-Australas. J. Anim. Sci., 2017; 30: 78–84
  24. Li Y., Wang X., Wang X.Q., Wang J., Zhao J.: Life-long dynamics of the swine gut microbiome and their implications in probiotics development and food safety, Gut Microbes, 2020; 11: 1824–1832
  25. Lillehoj H., Liu Y., Calsamiglia S., Fernandez Miyakawa M.E., Chi, F., Cravens R.L., Oh S., Gay C.G.: Phytochemicals as antibiotic alternatives to promote growth and enhance host health. Vet. Res., 2018; 49: 76
  26. Luise D., Correa F., Bosi P., Trevisi P.: A review of the effect of formic acid and its salts on the gastrointestinal microbiota and performance of pigs. Animals, 2020; 10: 887
  27. Marshall B.M., Levy S.B.: Food animals and antimicrobials: Impacts on human health. Clin. Microbiol. Rev., 2011; 24: 718–733
  28. McCarroll S.A., Altshuler D.M.: Copy-number variation and association studies of human disease. Nat. Genet., 2007; 39: S37–S42
  29. Mccormack U.M., Curião T., Wilkinson T., Metzler-Zebeli B.U., Reyer H., Ryan T., Calderon-Diaz J.A., Crispie F., Cotter P.D., Creevey C.J., Gardiner G.E., Lawlor P.G.: Fecal microbiota transplantation in gestating sows and neonatal offspring alters lifetime intestinal microbiota and growth in offspring. mSystems, 2018; 3: e00134–17
  30. Miller G.Y., Liu X., Mcnamara P.E., Barber D.A.: Influence of Salmonella in pigs preharvest and during pork processing on human health costs and risks from pork. J. Food Prot., 2005; 68: 1788–1798
  31. Mizrahi-Man O., Davenport E.R., Gilad Y.: Taxonomic classification of bacterial 16S rRNA genes using short sequencing reads: Evaluation of effective study designs. PLoS One, 2013; 8: e53608
  32. Niederwerder M.C., Constance L.A., Rowland R.R., Abbas W., Fernando S.C., Potter M.L., Sheahan M.A., Burkey T.E., Hesse R.A., Cino-Ozuna A.G.: Fecal microbiota transplantation is associated with reduced morbidity and mortality in porcine Circovirus associated disease. Front. Microbiol., 2018; 9: 1631
  33. O’Hara A.M., Shanahan F.: The gut flora as a forgotten organ. EMBO Rep., 2006; 7: 688–693
  34. Pliszczak-Król A., Rząsa A., Gemra M., Król J., Łuczak G., Zyzak A., Zalewski D., Iwaszko-Simonik A., Graczyk S.: Age-related changes of platelet and plasma coagulation parameters in young pigs. J. Vet. Diagn. Invest., 2016; 28: 561–567
  35. Pluske J.R., Turpin D.L., Kim J.C.: Gastrointestinal tract (gut) health in the young pig. Anim. Nutr., 2018; 4: 187–196
  36. Pokrzywnicka P., Gumprecht J.: Intestinal microbiota and its relationship with diabetes and obesity. Clin. Diabetol., 2016; 5: 164–172
  37. Quail M.A., Smith M., Coupland P., Otto T.D., Harris S.R., Connor T.R., Bertoni A., Swerdlow H.P., Gu Y.: A tale of three next generation sequencing platforms: Comparison of Ion Torrent, Pacific Biosciences and Illumina MiSeq sequencers. BMC Genomics, 2012; 13: 341
  38. Rhoads A., Au K.F.: PacBio sequencing and its applications. Genom. Proteom. Bioinf., 2015; 13: 278–289
  39. Shin D., Chang S.Y., Bogere P., Won K., Choi J.Y., Choi Y.J., Lee H.K., Hur J., Park B.Y., Kim Y., Heo J.: Beneficial roles of probiotics on the modulation of gut microbiota and immune response in pigs. PLoS One, 2019; 14: e0220843
  40. Sirisinha S.: The potential impact of gut microbiota on your health: Current status and future challenges. Asian Pac. J. Allergy Immunol., 2016; 34: 249–264
  41. Tan S.C., Chong C.W., Yap I.K., Thong K.L., Teh C.S.: Comparitive assessment of faecal microbial composition and metabonome of swine, farmers and human control. Sci. Rep., 2020; 10: 8997
  42. Tang K.L., Caffrey N.P., Nóbrega D.B., Cork S.C., Ronksley P.E., Barkema H.W., Polachek A.J., Ganshorn H., Sharma N., Kellner J.D., Ghali, W.A.: Restricting the use of antibiotics in food-producing animals and its associations with antibiotic resistance in food-producing animals and human beings: A systematic review and meta-analysis. Lancet Planet. Health, 2017; 1: e316–e327
  43. Trinh P., Zaneveld J.R., Safranek S., Rabinowitz P.M.: One Health relationships between human, animal and environmental microbiomes: A mini review. Front. Public Health, 2018; 6: 235
  44. Truszczyński M., Pejsak Z.: “Jedno zdrowie” – koncepcja łącząca działalność naukową i praktyczną z zakresu ochrony zdrowia i zwierząt. Życie Wet., 2015; 90: 280–283
  45. Truszczyński M., Pejsak Z.: Chorobotwórczość Clostridium difficile u człowieka i zwierząt w ocenie ewentualnych wzajemnych powiązań. Med. Weter., 2012; 68: 451–455
  46. Truszczyński M., Pejsak Z.: Rezerwuar Salmonella Typhimurium u świń i jego znaczenie w wywoływaniu zatruć pokarmowych ludzi. Med Weter., 2009; 65: 439–443
  47. Turner J.L., Dritz S.S., Minton J.E.: Alternatives to conventional antimicrobials in swine diets. Profes. Anim. Scien., 2001; 17: 217–226
  48. Vandeputte D., Falony G., Vieira-Silva S., Tito R.Y., Joossens M., Raes J.: Stool consistency is strongly associated with gut microbiota richness and composition, enterotypes and bacterial growth rates. Gut, 2016; 65: 57–62
  49. Yu D., Zhu W., Hang S.: Effects of long-term dietary protein restriction on intestinal morphology, digestive enzymes, gut hormones, and colonic microbiota in pigs. Animals, 2019; 9: 180
  50. Zeineldin M., Aldridge B., Lowe J.: Antimicrobial effects on swine gastrointestinal microbiota and their accompanying antibiotic resistome. Front. Microbiol., 2019; 10: 1035
  51. Zhao W., Wang Y., Liu S., Huang J., Zhai Z., He C., Ding J., Wang J., Wang H., Fan W., Zhao J., He M.: The dynamic distribution of porcine microbiota across different ages and gastrointestinal tract segments. PLoS One, 2015; 10: e0117441
Language: English
Page range: 297 - 303
Submitted on: Aug 12, 2020
Accepted on: Feb 16, 2021
Published on: May 7, 2021
Published by: Hirszfeld Institute of Immunology and Experimental Therapy
In partnership with: Paradigm Publishing Services
Publication frequency: 1 times per year

© 2021 Marta Satora, Anna Rząsa, Krzysztof Rypuła, Katarzyna Płoneczka-Janeczko, published by Hirszfeld Institute of Immunology and Experimental Therapy
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.