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Open Practices in Phytolith Research: A Community Survey Cover

Open Practices in Phytolith Research: A Community Survey

Open Access
|Apr 2024

Figures & Tables

oq-10-125-g1.png
Figure 1

FAIR Phytoliths Project work packages. The Community Survey box shows the workflow for this paper, the results of which will be combined with the FAIR Assessment results to produce the Community FAIR Guidelines in collaboration with the International Committee on Open Phytolith Science (ICOPS) of the International Phytolith Society (IPS).

Table 1

List of variables included in the multiple correspondence analysis (MCA) and their respective codes used for graphing.

VARIABLEMCA CODEDESCRIPTION
GenderMaleMale gender
FemaleFemale gender
OtherNon-binary gender or not expressed
BasedAfricaResearch activities conducted in an African institution/company
AmericasResearch activities conducted in an American institution/company
AsiaResearch activities conducted in an Asian institution/company
EuropeResearch activities conducted in a European institution/company
OceaniaResearch activities conducted in an Oceanian institution/company
FieldPastExpertise in disciplines related to reconstructions of past phenomena (e.g., archaeology, palaeoecology)
ModernExpertise in disciplines focused on currently observable phenomena (e.g., plant physiology, agronomy)
BothExpertise in both types of disciplines
PositionJuniorEarly-stage researcher (undergraduate students to early postdocs)
SeniorConsolidated researcher (advanced postdocs to professors)
ProfessionalIndependent researcher
OpenSoftwareOpenSoftware_YesUser of open access (e.g., Google Docs) and/or open source software (e.g., R) for writing, data analysis and data visualisation
OpenSoftware_NoNon-user of open access and/or open source software for writing, data analysis and data visualisation
PublicationsPublications_YesAuthorship (not necessarily as first author) in scientific publications
Publications_NoNo authorship in scientific publications
PreprintGreenPreprintGreen_YesExperience in and/or predisposition to publish preprints and as green open access
PreprintGreen_NoNo experience in and/or predisposition to publish preprints and as green open access
Table 2

Summary results of the survey.

NUMBER OF PARTICIPANTS81
Demographic/academic data
GenderFemale54 (66.7%)
Male25 (30.9%)
Other (non-binary; prefer not to answer)2 (2.5%)
BasedAfrica2 (2.5%)
Americas35 (43.2%)
Asia10 (12.3%)
Europe30 (37%)
Oceania4 (4.9%)
Research location(s)*Africa12 (12.2%)
Americas34 (34.7%)
Asia30 (30.6%)
Europe17 (17.4%)
Oceania5 (5.1%)
Main research field(s)*Agronomy3 (2.5%)
Archaeology61 (50%)
Bioinformatics1 (0.8%)
Botany21 (17.2%)
Geochemistry5 (4.1%)
Palaeoenvironment27 (22.1%)
Palaeontology4 (3.3%)
PositionBA/MA student/graduate2 (2.5%)
PhD candidate19 (23.5%)
Junior postdoc24 (29.6%)
Senior postdoc5 (6.2%)
Senior untenured4 (4.9%)
Senior tenured23 (28.4%)
Professional4 (4.9%)
Open research practices
Pre-publicationNoYes
Open access/source writing software41 (50.6%)40 (49.4%)
Open access/source analysis software29 (35.8%)52 (64.2%)
Open access/source visualisation software20 (24.7%)61 (75.3%)
Knowledge/use of open access repository48 (59.3%)33 (40.7%)
At publication**Never published: 10 (12.3%)Published: 71 (87.7%)
Gold open accessNo: 4 (40%)Yes: 6 (60%)No: 47 (66.2%)Yes: 24 (33.8%)
Preprint/green open accessNo: 3 (30%)Yes: 7 (70%)No: 29 (40.8%)Yes: 42 (59.2%)
Replicability of published results
Methods (level of description)*Complete description (in publication or repository)49 (50%)
Description of modified protocol25 (25.5%)
Reference to published methods24 (24.5%)
Methods (perception of replicability)Yes70 (98.6%)
No1 (1.4%)
Percentage of publications including raw dataZero15 (21.1%)
Twenty7 (9.9%)
Forty11 (15.5%)
Sixty10 (14.1%)
Eighty14 (19.7%)
Hundred14 (19.7%)
Raw data published (where and how)*Table in main text32 (32%)
Supplementary file49 (49%)
DOI-based repository13 (13%)
Personal repository6 (6%)
Attitude towards open/FAIR research
Interest in recognitionYes26 (32%)
No14 (17%)
Maybe41 (51%)
Interest in receiving more informationYes71 (88%)
No1 (1%)
Maybe9 (11%)
Interest in collaboratingYes65 (80%)
No16 (20%)

[i] *These categories represent multiple choice questions where respondents were allowed to check multiple answers. **The categories in the subsection express predisposition in the case of participants without publications, experience in the case of participants with gold open access publications, and a combination of predisposition and/or experience in the case of preprints/green open access in participants with publications.

oq-10-125-g2.png
Figure 2

Multiple correspondence analysis biplot displaying results of the first part of the survey. First two dimensions are shown including groups of participants (coloured ellipses of confidence intervals at 95%) according to A) their academic/professional position, B) their field of expertise, C) their tendency to use open source/access software and D) their experience in/predisposition to publish preprints and/or provide green open access. Participants are represented by dots and variables (i.e., descriptions and answers of the participants) by triangles. Each number associated with a dot corresponds to a unique ID of the participant (see File S6 in Ruiz-Pérez et al. 2024). Black text represents each category of the variables under analysis.

DOI: https://doi.org/10.5334/oq.125 | Journal eISSN: 2055-298X
Language: English
Submitted on: Jul 8, 2023
Accepted on: Apr 8, 2024
Published on: Apr 22, 2024
Published by: Ubiquity Press
In partnership with: Paradigm Publishing Services
Publication frequency: 1 issue per year

© 2024 Javier Ruiz-Pérez, Emma Karoune, Céline Kerfant, Juan José García-Granero, Marco Madella, Carla Lancelotti, published by Ubiquity Press
This work is licensed under the Creative Commons Attribution 4.0 License.