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KadiStudio use-case workflow: Automation of data-processing for in situ micropillar compression tests Cover

KadiStudio use-case workflow: Automation of data-processing for in situ micropillar compression tests

Open Access
|Jul 2023

References

  1. Afgan, E, Baker, D, Batut, B, Van den Beek, M, Bouvier, D, Čech, M, Chilton, J, Clements, D, Coraor, N, Grüning, BA, et al. 2018. The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update. Nucleic acids research, 46(W1): W537W544. DOI: 10.1093/nar/gky379
  2. Deelman, E, Gannon, D, Shields, M and Taylor, I. 2009. Workflows and e-Science: An overview of workflow system features and capabilities. Future Generation Computer Systems, 25(5): 528540. DOI: 10.1016/j.future.2008.06.012
  3. Dehm, G, Jaya, BN, Raghavan, R and Kirchlechner, C. 2018. Overview on micro-and nanomechanical testing: New insights in interface plasticity and fracture at small length scales. Acta Materialia, 142: 248282. DOI: 10.1016/j.actamat.2017.06.019
  4. Draxl, C and Scheffler, M. 2020. Big data-driven materials science and its FAIR data infrastructure. In: Handbook of Materials Modeling: Methods: Theory and Modeling, pp. 4973. DOI: 10.1007/978-3-319-44677-6_104
  5. Griem, L, Zschumme, P, Laqua, M, Brandt, N, Schoof, E, Altschuh, P and Selzer, M. 2022. KadiStudio: FAIR Modelling of Scientific Research Processes. Data Science Journal, 21(1): 117. DOI: 10.5334/dsj-2022-016
  6. Jain, A, Ong, SP, Chen, W, Medasani, B, Qu, X, Kocher, M, Brafman, M, Petretto, G, Rignanese, G, Hautier, G, et al. 2015. FireWorks: A dynamic workflow system designed for high-throughput applications. Concurrency and Computation: Practice and Experience, 27(17): 50375059. DOI: 10.1002/cpe.3505
  7. Kadi4Mat Team and Contributors. 2022a. IAM-CMS/kadi-apy: Kadi4Mat API Library. Version 0.20.0. DOI: 10.5281/zenodo.5971821
  8. Kadi4Mat Team and Contributors. 2022b. IAM-CMS/workflow-nodes. Version 0.13.0. DOI: 10.5281/zenodo.5971840
  9. Kadi4Mat Team and Contributors. 2022c. IAM-CMS/xmlhelpy. Version 0.9.2. DOI: 10.5281/zenodo.5971732
  10. Kluyver, T, Ragan-Kelley, B, Pérez, F, Granger, B, Bussonnier, M, Frederic, J, Kelley, K, Hamrick, J, Grout, J, Corlay, S, Ivanov, P, Avila, D, Abdalla, S, Willing, C and Jupyter Development Team. 2016. Jupyter Notebooks? a publishing format for reproducible computational workflows. In: Loizides, F and Schmidt, B (eds.), Positioning and Power in Academic Publishing: Players, Agents and Agendas. IOS Press. pp. 8790. DOI: 10.3233/978-1-61499-649-1-87
  11. Liu, J, Pacitti, E, Valduriez, P and Mattoso, M. 2015. A survey of data-intensive scientific workflow management. Journal of Grid Computing, 13: 457493. DOI: 10.1007/s10723-015-9329-8
  12. Ludäscher, B, Altintas, I, Bowers, S, Cummings, J, Critchlow, T, Deelman, E, De Roure, D, Freire, J, Goble, CA and Jones, MB, et al. 2009. Scientific Process Automation and Workflow Management. Scientific Data Management, 10(3): 476508. DOI: 10.1201/9781420069815-c13
  13. Malyar, NV, Springer, H, Wichert, J, Dehm, G, Kirchlechner, C. 2019. Synthesis and mechanical testing of grain boundaries at the micro and sub-micro scale. Materials Testing, 61(1): 518. DOI: 10.3139/120.111286
  14. Pinaev, et al. 2017. QtNodes. Node Editor. https://github.com/paceholder/nodeeditor.
  15. Pizzi, G, Cepellotti, A, Sabatini, R, Marzari, N and Kozinsky, B. 2016. “AiiDA: automated interactive infrastructure and database for computational science”. Computational Materials Science, 111: 218230. DOI: 10.1016/j.commatsci.2015.09.013
  16. Uchic, MD, Dimiduk, DM, Florando, JN and Nix, WD. 2004. Sample dimensions influence strength and crystal plasticity. In: Science, 305(5686): pp. 986989. DOI: 10.1126/science.1098993
Language: English
Submitted on: Mar 30, 2023
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Accepted on: May 25, 2023
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Published on: Jul 10, 2023
Published by: Ubiquity Press
In partnership with: Paradigm Publishing Services
Publication frequency: 1 issue per year

© 2023 Rihab Al-Salman, Camila Aguiar Teixeira, Philipp Zschumme, Subin Lee, Lars Griem, Jasmin Aghassi-Hagmann, Christoph Kirchlechner, Michael Selzer, published by Ubiquity Press
This work is licensed under the Creative Commons Attribution 4.0 License.