References
- Alemneh AA, Zhou Y, Ryder MH, Denton MD. Mechanisms in plant growth-promoting rhizobacteria that enhance legume-rhizobial symbioses. J Appl Microbiol. 2020 Nov;129(5):1133–1156. https://doi.org/10.1111/jam.14754
- Alibrandi P, Schnell S, Perotto S, Cardinale M. Diversity and structure of the endophytic bacterial communities associated with three terrestrial orchid species as revealed by 16S rRNA gene metabarcoding. Front Microbiol. 2020 Dec;11:604964. https://doi.org/10.3389/fmicb.2020.604964
- Alori ET, Glick BR, Babalola OO. Microbial phosphorus solubilization and its potential for use in sustainable agriculture. Front Microbiol. 2017 Jun;8:971. https://doi.org/10.3389/fmicb.2017.00971
- Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. J Mol Biol. 1990 Oct;215(3):403–410. https://doi.org/10.1016/S0022-2836(05)80360-2
- Ambrosini A, Passaglia LMP. Plant growth-promoting bacteria (PGPB): Isolation and screening of PGP activities. Curr Protoc Plant Biol. 2017 Sep;2(3):190–209. https://doi.org/10.1002/pb.20054
- Antoun H, Beauchamp CJ, Goussard N, Chabot R, Lalande R. Potential of Rhizobium and Bradyrhizobium species as plant growth promoting rhizobacteria on non-legumes: Effect on radishes (Raphanus sativus L.). In: Hardarson G, Broughton WJ., editors. Molecular Microbial Ecology of the Soil. Developments in Plant and Soil Sciences, vol 83. Dordrecht (The Netherlands): Springer; 1998. p. 57–67. https://doi.org/10.1007/978-94-017-2321-3_5
- Araya MA, Valenzuela T, Inostroza NG, Maruyama F, Jorquera MA, Acuña JJ. Isolation and characterization of cold-tolerant hyper-ACC-degrading bacteria from the rhizosphere, endosphere, and phyllosphere of Antarctic vascular plants. Microorganisms. 2020 Nov;8(11):1788. https://doi.org/10.3390/microorganisms8111788
- ATSDR. Draft toxicological profile for manganese. U.S. Department of Health and Human Services, Public Health Service. Atlanta (USA): Agency for Toxic Substances and Disease Registry; 2008.
- Barriuso J, Pereyra MT, Lucas García JA, Megías M, Gutierrez Mañero FJ, Ramos B. Screening for putative PGPR to improve establishment of the symbiosis Lactarius deliciosus-Pinus sp. Microb Ecol. 2005 Jul;50(1):82–9. https://doi.org/10.1007/s00248-004-0112-9
- Benesperi R, Giuliani C, Zanetti S, Gennai M, Mariotti Lippi M, Guidi T, Nascimbene J, Foggi B. Forest plant diversity is threatened by Robinia pseudoacacia (black-locust) invasion. Biodivers Conserv. 2012;21:3555–3568. https://doi.org/10.1007/s10531-012-0380-5
- Berendsen RL, Pieterse CM, Bakker PA. The rhizosphere microbiome and plant health. Trends Plant Sci. 2012 Aug;17(8):478–86. https://doi.org/10.1016/j.tplants.2012.04.001
- Braud A, Jézéquel K, Bazot S, Lebeau T. Enhanced phytoextraction of an agricultural Cr-and Pb-contaminated soil by bioaugmentation with siderophore-producing bacteria. Chemosphere. 2009 Jan; 74(2):280–286. https://doi.org/10.1016/j.chemosphere.2008.09.013
- Brígido C, Menéndez E, Paço A, Glick BR, Belo A, Félix MR, Oliveira S, Carvalho M. Mediterranean native leguminous plants: A reservoir of endophytic bacteria with potential to enhance chickpea growth under stress conditions. Microorganisms. 2019 Sep; 7(10):392. https://doi.org/10.3390/microorganisms7100392
- Brooks RR. Serpentine and its vegetation: A multidisciplinary approach. Portland (USA): Dioscorides Press; 1987.
- Bulgarelli D, Schlaeppi K, Spaepen S, Ver Loren van Themaat E, Schulze-Lefert P. Structure and functions of the bacterial microbiota of plants. Annu Rev Plant Biol. 2013;64:807–838. https://doi.org/10.1146/annurev-arplant-050312-120106
- Chytrý M, Maskell LC, Pino J, Pyšek P, Vilà M, Font X, Smart SM. Habitat invasions by alien plants: A quantitative comparison among Mediterranean, subcontinental and oceanic regions of Europe. J Appl Ecol. 2008;45(2):448–458. https://doi.org/10.1111/j.1365-2664.2007.01398.x
- Denneman CAJ, Robberse JG. Ecotoxicological risk assessment as a base for development of soil quality criteria. In: Arendt F, Hinsenveld M, Van Den Brink WJ, editors. Contaminated soil ‘90. Dordrecht (The Netherlands): Springer; 1990. p. 157–164. https://doi.org/10.1007/978-94-011-3270-1_28
- Duca D, Lorv J, Patten CL, Rose D, Glick BR. Indole-3-acetic acid in plant-microbe interactions. Antonie Van Leeuwenhoek. 2014 Jul; 106(1):85–125. https://doi.org/10.1007/s10482-013-0095-y
- Eddy NO, Odoemelam SA, Mbaba A. Elemental composition of soil in some dumpsites. Electron J Environ Agric Food Chem. 2006; 5(2):1036–1042.
- Fan M, Liu Z, Nan L, Wang E, Chen W, Lin Y, Wei G. Isolation, characterization, and selection of heavy metal-resistant and plant growth-promoting endophytic bacteria from root nodules of Robinia pseudoacacia in a Pb/Zn mining area. Microbiol Res. 2018 Dec; 217:51–59. https://doi.org/10.1016/j.micres.2018.09.002
- Gamalero E, Glick BR. Mechanisms used by plant growth promoting bacteria. In: Maheshwari D, editor. Bacteria in agrobiology: Plant nutrient management. Berlin, Heidelberg (Germany): Springer; 2011. p. 17–46. https://doi.org/10.1007/978-3-642-21061-7_2
- Gamalero E, Lingua G, Glick BR. Ethylene, ACC, and the plant growth-promoting enzyme ACC deaminase. Biology. 2023 Jul; 12(8):1043. https://doi.org/10.3390/biology12081043
- Glick BR. Bacteria with ACC deaminase can promote plant growth and help to feed the world. Microbiol Res. 2014 Jan;169(1):30–39. https://doi.org/10.1016/j.micres.2013.09.009
- Goswami D, Thakker JN, Dhandhukia PC. Simultaneous detection and quantification of indole-3-acetic acid (IAA) and indole-3-butyric acid (IBA) produced by rhizobacteria from l-tryptophan (Trp) using HPTLC. J Microbiol Methods. 2015 Mar;110:7–14. https://doi.org/10.1016/j.mimet.2015.01.001
- Goswami M, Deka S. Plant growth-promoting rhizobacteria – alleviators of abiotic stresses in soil: A review. Pedosphere. 2020 Feb; 30(1):40–61. https://doi.org/10.1016/S1002-0160(19)60839-8
- Haahtela K, Kari K, Sundman V. Nitrogenase activity (acetylene reduction) of root-associated, cold-climate Azospirillum, Enterobacter, Klebsiella, and Pseudomonas species during growth on various carbon sources and at various partial pressures of oxygen. Appl Environ Microbiol. 1983 Feb;45(2):563–570. https://doi.org/10.1128/aem.45.2.563-570.1983
- Hammer Ø, Harper DAT, Ryan PD. PAST: Paleontological statistics software package for education and data analysis [Internet]. Palaeontologia Electronica. 2001;4(1):9pp. [cited 2024 Jun 14]. Available from http://palaeo-electronica.org/2001_1/past/issue1_01.htm
- Herrera-Quiterio A, Toledo-Hernández E, Aguirre-Noyola JL, Romero Y, Ramos J, Palemón-Alberto F, Toribio-Jiménez J. Antagonic and plant growth-promoting effects of bacteria isolated from mine tailings at El Fraile, Mexico. Rev Argent Microbiol. 2020 Jul-Sep;52(3):231–239. https://doi.org/10.1016/j.ram.2019.08.003
- Hu L, Robert CAM, Cadot S, Zhang X, Ye M, Li B, Manzo D, Chervet N, Steinger T, van der Heijden MGA, et al. Root exudate metabolites drive plant-soil feedbacks on growth and defense by shaping the rhizosphere microbiota. Nat Commun. 2018 Jul; 9(1):2738. https://doi.org/10.1038/s41467-018-05122-7
- Hu S, Jiao J, Kou M, Wang N, García-Fayos P, Liu S. Quantifying the effects of Robinia pseudoacacia afforestation on plant community structure from a functional perspective: New prospects for management practices on the hilly and gullied Loess Plateau, China. Sci Total Environ. 2021 Jun;773:144878. https://doi.org/10.1016/j.scitotenv.2020.144878
- Huu HH, Rudy S, Van Damme A. Distribution and contamination status of heavy metals in estuarine sediments near CauOng Harbor, Ha Long Bay, Vietnam. Geol Belg. 2010;13(1–2):37–47.
- Iqbal Z, Iqbal MS, Hashem A, Abd Allah EF, Ansari MI. Plant defense responses to biotic stress and its interplay with fluctuating dark/light conditions. Front Plant Sci. 2021 Mar;12:631810. https://doi.org/10.3389/fpls.2021.631810
- ISO 11047:1998. Soil quality – Determination of cadmium, chromium, cobalt, copper, lead, manganese, nickel and zinc – Flame and electrothermal atomic absorption spectrometric methods. Geneva (Switzerland): International Organization for Standardization; 1998.
- ISO 11466:1995. Soil quality – Extraction of trace elements soluble in aqua regia. Geneva (Switzerland): International Organization for Standardization; 1995.
- Kierczak J, Pietranik A, Pędziwiatr A. Ultramafic geoecosystems as a natural source of Ni, Cr, and Co to the environment: A review. Sci Total Environ. 2021 Feb;755(1):142620. https://doi.org/10.1016/j.scitotenv.2020.142620
- King EO, Ward MK, Raney DE. Two simple media for the demonstration of pyocyanin and fluorescin. J Lab Clin Med. 1954 Aug; 44(2):301–307.
- Kolbek J, Vítková M, Větvička V. [From history of Central European Robinia growths and its communities] (in Czech). Zpr Čes Bot Společ. 2004;39(2):287–298.
- Kruckeberg AR. III. Plant species in relation to serpentine soils. In: Whittaker R,H. The Ecology of Serpentine Soils. Ecology. 1954; 35(2):267–274. https://doi.org/10.2307/1931126
- Kumar A, Ramanathan AL, Prabha S, Ranjan RK, Ranjan S, Singh G. Metal speciation studies in the aquifer sediments of Semria Ojhapatti, Bhojpur District, Bihar. Environ Monit Assess. 2012 May;184(5):3027–3042. https://doi.org/10.1007/s10661-011-2168-6
- Kumar A, Verma JP. Does plant-microbe interaction confer stress tolerance in plants: A review? Microbiol Res. 2018 Mar;207:41–52. https://doi.org/10.1016/j.micres.2017.11.004
- Kumar VS, Menon S, Agarwal H, Gopalakrishnan D. Characterization and optimization of bacterium isolated from soil samples for the production of siderophores. Resour Effic Technol. 2017 Dec; 3(4):434–439. https://doi.org/10.1016/j.reffit.2017.04.004
- Latt ZK, Yu SS, Kyaw EP, Lynn TM, Nwe MT, Mon WW. Isolation, evaluation and characterization of free living nitrogen fixing bacteria from agricultural soils in Myanmar for biofertilizer formulation. Int J Plant Biol. 2018;6(3):1092.
- Lee W, van Baalen M, Jansen VA. An evolutionary mechanism for diversity in siderophore-producing bacteria. Ecol Lett. 2012 Feb; 15(2):119–125. https://doi.org/10.1111/j.1461-0248.2011.01717.x
- Lizarraga Mendiola L, Duran Dominguez MC, Gonzalez Sandoval MR. Environmental assessment of an active tailings pile in the State of Mexico (Central Mexico). Res J Environ Sci. 2008; 2(3):197–208. https://doi.org/10.3923/rjes.2008.197.208
- Loew O, May DW. The relation of lime and magnesia to plant growth. I. Liming of soils from a physiological standpoint. II. Experimental study of the relation of lime and magnesia to plant growth. Washington (Usa): Government Printing Office; 1901.
- Loska K, Wiechuła D, Korus I. Metal contamination of farming soils affected by industry. Environ Int. 2004 Apr;30(2):159–165. https://doi.org/10.1016/S0160-4120(03)00157-0
- Ma Y, Rajkumar M, Freitas H. Improvement of plant growth and nickel uptake by nickel resistant-plant-growth promoting bacteria. J Hazard Mater. 2009 Jul;166(2–3):1154–1161. https://doi.org/10.1016/j.jhazmat.2008.12.018
- Masson-Boivin C, Giraud E, Perret X, Batut J. Establishing nitrogen-fixing symbiosis with legumes: how many rhizobium recipes? Trends Microbiol. 2009 Oct;17(10):458–466. https://doi.org/10.1016/j.tim.2009.07.004
- Misra S, Chauhan PS. ACC deaminase-producing rhizosphere competent Bacillus spp. mitigate salt stress and promote Zea mays growth by modulating ethylene metabolism. 3 Biotech. 2020 Mar; 10(3):119. https://doi.org/10.1007/s13205-020-2104-y
- Morillo J, Usero J, Gracia I. Partitioning of metals in sediments from the Odiel River (Spain). Environ Int. 2002 Sep;28(4):263–271. https://doi.org/10.1016/s0160-4120(02)00033-8
- Mucha AP, Almeida CMR, Bordalo AA, Vasconcelos MTSD. Exudation of organic acids by a marsh plant and implications on trace metal availability in the rhizosphere of estuarine sediments. Estuarine Coastal Shelf Sci. 2005 Aug;65(1–2):191–198. https://doi.org/10.1016/j.ecss.2005.06.007
- Müller G. [Schwermetallen in den Sedimenten des Rheins] (in German). Umsch Wiss Tech. 1979;79:778–783.
- Nye JV, Guerin WF, Boyd SA. Heterotrophic activity of microorganisms in soils treated with quaternary ammonium compounds. Environ Sci Technol. 1994 May;28(5):944–951. https://doi.org/10.1021/es00054a029
- Okedeyi OO, Dube S, Awofolu OR, Nindi MM. Assessing the enrichment of heavy metals in surface soil and plant (Digitaria eriantha) around coal-fired power plants in South Africa. Environ Sci Pollut Res Int. 2014 Mar;21(6):4686–4696. https://doi.org/10.1007/s11356-013-2432-0
- Peloquin RL, Hiebert RD. The effects of black locust (Robinia pseudoacacia L.) on species diversity and composition of black oak savanna/woodland communities. Nat Areas J. 1999;19:121–131.
- Pérez-Miranda S, Cabirol N, George-Téllez R, Zamudio-Rivera LS, Fernández FJ. O-CAS, a fast and universal method for siderophore detection. J Microbiol Methods. 2007 Jul;70(1):127–131. https://doi.org/10.1016/j.mimet.2007.03.023
- Pii Y, Mimmo T, Tomasi N, Terzano R, Cesco S, Crecchio C. Microbial interactions in the rhizosphere: beneficial influences of plant growth-promoting rhizobacteria on nutrient acquisition processes. A review. Biol Fertil Soils. 2015;51:403–415. https://doi.org/10.1007/s00374-015-0996-1
- Rajkumar M, Ae N, Prasad MN, Freitas H. Potential of siderophore-producing bacteria for improving heavy metal phytoextraction. Trends Biotechnol. 2010 Mar;28(3):142–149. https://doi.org/10.1016/j.tibtech.2009.12.002
- Rajkumar M, Vara Prasad MN, Freitas H, Ae N. Biotechnological applications of serpentine soil bacteria for phytoremediation of trace metals. Crit Rev Biotechnol. 2009;29(2):120–130. https://doi.org/10.1080/07388550902913772
- Saha M, Sarkar S, Sarkar B, Sharma BK, Bhattacharjee S, Tribedi P. Microbial siderophores and their potential applications: A review. Environ Sci Pollut Res Int. 2016 Mar;23(5):3984–3999. https://doi.org/10.1007/s11356-015-4294-0
- Sayers EW, Beck J, Brister JR, Bolton EE, Canese K, Comeau DC, Funk K, Ketter A, Kim S, Kimchi A, et al. Database resources of the National Center for Biotechnology Information. Nucleic Acids Res. 2020 Jan 8;48(D1):D9–D16. https://doi.org/10.1093/nar/gkz899
- Sazykin I, Khemelevtsova L, Azhogina T, Sazykina M. Heavy metals influence on the bacterial community of soils: A review. Agriculture. 2023;13(3):653. https://doi.org/10.3390/agriculture13030653
- Schwyn B, Neilands JB. Universal chemical assay for the detection and determination of siderophores. Anal Biochem. 1987 Jan;160(1): 47–56. https://doi.org/10.1016/0003-2697(87)90612-9
- Senthilkumar M, Amaresan N, Sankaranarayanan A. Quantitative estimation of siderophore production by microorganisms. In: Plant-microbe interactions. Springer Protocols Handbooks. New York (USA): Humana; 2021, p. 183–186. https://doi.org/10.1007/978-1-0716-1080-0_48
- Shaharoona B, Arshad M, Zahir ZA, Khalid A. Performance of Pseudomonas spp. containing ACC-deaminase for improving growth and yield of maize (Zea mays L.) in the presence of nitrogenous fertilizer. Soil Biol Biochem. 2006 Sep;38(9):2971–2975. https://doi.org/10.1016/j.soilbio.2006.03.024
- Sinex SA, Wright DA. Distribution of trace metals in the sediments and biota of Chesapeake Bay. Mar Pollut Bull. 1988 Jun;19(9): 425–431. https://doi.org/10.1016/0025-326X(88)90397-9
- Sitzia T, Campagnaro T, Dainese M, Cierjacks A. Plant species diversity in alien black locust stands: a paired comparison with native stands across a north-Mediterranean range expansion. For Ecol Manage. 2012 Dec;285:85–91. https://doi.org/10.1016/j.foreco.2012.08.016
- Sun C, Wu P, Wang G, Kong X. Heavy metal pollution decreases the stability of microbial co-occurrence networks in the rhizosphere of native plants. Front Environ Sci. 2022;10:979922. https://doi.org/10.3389/fenvs.2022.979922
- Sutherland RA, Tolosa CA, Tack FM, Verloo MG. Characterization of selected element concentrations and enrichment ratios in background and anthropogenically impacted roadside areas. Arch Environ Contam Toxicol. 2000 May;38(4):428–438. https://doi.org/10.1007/s002449910057
- Trivedi P, Leach JE, Tringe SG, Sa T, Singh BK. Plant-microbiome interactions: From community assembly to plant health. Nat Rev Microbiol. 2020 Nov;18(11):607–621. https://doi.org/10.1038/s41579-020-0412-1
- Vítková M, Müllerová J, Sádlo J, Pergl J, Pyšek P. Black locust (Robinia pseudoacacia) beloved and despised: A story of an invasive tree in Central Europe. For Ecol Manage. 2017 Jan;384:287–302. https://doi.org/10.1016/j.foreco.2016.10.057
- Vlachodimos K, Papatheodorou EM, Diamantopoulos J, Monokrousos N. Assessment of Robinia pseudoacacia cultivations as a restoration strategy for reclaimed mine spoil heaps. Environ Monit Assess. 2013 Aug;185(8):6921–6932. https://doi.org/10.1007/s10661-013-3075-9
- Vlamis J. Growth of lettuce and barley as influenced by degree of calcium saturation of soil. Soil Sci. 1949;67(6):453–466.
- Von Holle B, Joseph KA, Largay EF, Lohnes RG. Facilitations between the introduced nitrogen-fixing tree, Robinia pseudoacacia, and nonnative plant species in the glacial outwash upland ecosystem of Cape Cod, MA. Biodivers Conserv. 2006;15:2197–2215. https://doi.org/10.1007/s10531-004-6906-8
- VROM 93561/b//4-94 1221/027. The Netherlands’ National Environmental Policy Plan 2, VROM 93561/b//4–94 1221/027. The Hague (The Netherlands): Ministry of Housing, Spatial Planning and the Environment; 1994.
- Walker RB, Walker HM, Ashworth PR. Calcium-magnesium nutrition with special reference to serpentine soils. Plant Physiol. 1955 May;30(3):214–221. https://doi.org/10.1104/pp.30.3.214
- Wang X, Xie H, Ku Y, Yang X, Chen Y, Yang N, Mei X, Cao C. Chemotaxis of Bacillus cereus YL6 and its colonization of Chinese cabbage seedlings. Plant Soil. 2020;447:413–430. https://doi.org/10.1007/s11104-019-04344-y
- Woese CR. Bacterial evolution. Microbiol Rev. 1987 Jun;51(2): 221–271. https://doi.org/10.1128/mr.51.2.221-271.1987
- Xu W, Wang F, Zhang M, Ou T, Wang R, Strobel G, Xiang Z, Zhou Z, Xie J. Diversity of cultivable endophytic bacteria in mulberry and their potential for antimicrobial and plant growth-promoting activities. Microbiol Res. 2019 Dec;229:126328. https://doi.org/10.1016/j.micres.2019.126328
- Yahaghi Z, Shirvani M, Nourbakhsh F, de la Peña TC, Pueyo JJ, Talebi M. Isolation and characterization of Pb-solubilizing bacteria and their effects on Pb uptake by Brassica juncea: Implications for microbe-assisted phytoremediation. J Microbiol Biotechnol. 2018 Jul;28(7):1156–1167. https://doi.org/10.4014/jmb.1712.12038
- Yüksek T, Yüksek F. The effects of restoration on soil properties in degraded land in the semi-arid region of Turkey. Catena. 2011 Jan; 84(1):47–53. https://doi.org/10.1016/j.catena.2010.09.002
- Zhang S, Deng Z, Borham A, Ma Y, Wang Y, Hu J, Wang J, Bohu T. Significance of soil siderophore-producing bacteria in evaluation and elevation of crop yield. Horticulturae. 2023 Mar 12; 9(3): 370. https://doi.org/10.3390/horticulturae9030370