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Isolation and Characterization of Potential Lignin Peroxidase-Producing Bacteria from Compost Samples at Richards Bay (South Africa) Cover

Isolation and Characterization of Potential Lignin Peroxidase-Producing Bacteria from Compost Samples at Richards Bay (South Africa)

Open Access
|Jun 2023

Figures & Tables

Fig. 1.

Graphs of lignin degradation capability, pH variation, and growth of E. coli, P. aeruginosa, E. kobei, and E. xiangfangensis.
Graphs of lignin degradation capability, pH variation, and growth of E. coli, P. aeruginosa, E. kobei, and E. xiangfangensis.

Fig. 2.

Enzyme activity (the recovered supernatant) of E. coli (LR0250096), and P. aeruginosa (CP031449.2) on the lignin enriched medium.
Enzyme activity (the recovered supernatant) of E. coli (LR0250096), and P. aeruginosa (CP031449.2) on the lignin enriched medium.

Fig. 3.

The phylogenetic tree of the bacteria from this study (red) in relation to some other ligninolytic bacteria in the NCBI database.
The phylogenetic tree of the bacteria from this study (red) in relation to some other ligninolytic bacteria in the NCBI database.

Degradation of lignin model compounds; guaiacol and veratryl alcohols by the bacterial isolates from the compost samples_

S/NBacterial codeIsolation sourceGuaiacol alcoholVeratryl alcohol
1Old AOld cow dung++++
2*Old AOld cow dung++++
3OOld AOld cow dung+++++
4Old A1Old cow dung++
5*Old A2Old cow dung+++
6Old A2Old cow dung++++++
7/*New AFresh cow dung++
8New AFresh cow dung++++++
9*New AFresh cow dung++
10New BFresh cow dung++++
11ONew BFresh cow dung
12*New BFresh cow dung
13Saw ASawdust
14Saw A1Sawdust+
15Saw A2Sawdust++++++
16Saw BSawdust
17*Saw BSawdust+++
18Saw B1Sawdust++
19Soil ASoil+
20*Soil ASoil+++
21Soil A1Soil+++
22*Soil BSoil++++
23Soil BSoil+++++
24Soil B1Soil++++++
25Soil 2Soil+++
26Soil 7Soil+++

Quantitative analysis for the lignin peroxidase activity of the bacteria isolates_

S/NBacterial strainsLignin peroxidase activity (U/l)
1Pseudomonas aeruginosa (MF144461.1)1.37 × 10–2a
2Escherichia coli (LR025096.1)1.99 × 10–1b
3Pseudomonas aeruginosa (KR136350.1)8.70 × 10–2c
4Pseudomonas aeruginosa (CP031449.2)1.99 × 10–1b
5Enterobacter xiangfangensis (MH304301.1)1.09 × 10–2d
6Enterobacter kobei (CP032897.1)8.55 × 10–2c

Identification of the isolated bacterial cultures by 16S rDNA_

Bacterial nameAccession number (16S rRNA gene sequence)Bacterial code
Pseudomonas aeruginosaKR136350.1Soil B
Pseudomonas aeruginosaKT799669.1*Old A
Pseudomonas aeruginosaMF144461.1OOld A
Pseudomonas aeruginosaKR136350.1New B
Pseudomonas aeruginosaKR136350.1New A
Pseudomonas aeruginosaCP031449.2Saw A2
Pseudomonas aeruginosaKT799669.1Soil B1
Escherichia coliLR025096.1Old A2
Enterobacter kobeiCP032897.1Soil 7
Enterobacter xiangfangensisMH304301.1Soil 2

Lignin peroxidase and Laccase producing potential of the isolated bacteria_

S/NBacterial codeLignin peroxidase activityLaccase activity
1*Old A+++
2OOld A+++
3Old A2+++
4New A+++
5New B+++
6Saw A2+++
7Soil B+++
8Soil B1+++
9Soil 2++
10Soil 7++

Decolourization of synthetic lignin-like dyes (halo zone measured in mm) by the selected ligninolytic bacterial isolates_

S/NBacterial codeRBBR (mm)AZ (mm)CR (mm)
1Old A15.0 ± 0.10c35.0 ± 0.04b0.00 ± 0.00f
2*Old A26.0 ± 0.00b40.0 ± 0.01d42.0 ± 0.01a
3OOld A24.0 ± 0.06b30.0 ± 0.00c31.0 ± 0.10c
4Old A119.0 ± 0.00d29.0 ± 0.05c0.00 ± 0.00f
5*Old A20.00 ± 0.00f34.0 ± 0.04e10.0 ± 0.20d
6Old A235.0 ± 0.10a42.0 ± 0.11d40.0 ± 0.08a
7New A8.00 ± 0.50e40.0 ± 0.00d20.0 ± 0.01e
8New B30.0 ± 0.00h50.0 ± 0.01a26.0 ± 0.02b
9Saw A215.0 ± 0.04c35.0 ± 0.02b12.0 ± 0.50d
10Soil A10.00 ± 0.00f8.00 ± 0.01g24.0 ± 0.10b
11*Soil B0.00 ± 0.00f25.0 ± 0.02f19.0 ± 0.00e
12Soil B34.0 ± 0.00a50.0 ± 0.02a19.0 ± 0.10e
13Soil B110.0 ± 0.06e37.0 ± 0.01b40.0 ± 0.03a
14Soil 249.0 ± 0.00h25.0 ± 0.08f49.0 ± 0.01h
15Soil 735.0 ± 0.02a16.0 ± 0.04h35.0 ± 0.05i

Characteristics of ligninolytic bacteria from cow dung, sawdust, and soil samples_

Bacterial codeCatalase testOxidase testStarch hydrolysisUrease testIndole testCitrate test
*Old A+++
OOld A++++
Old A2++++
New A++++
New B++++
Saw A2+++
Soil B+++
Soil B1+++
Soil 2++++
Soil 7+++
DOI: https://doi.org/10.33073/pjm-2023-003 | Journal eISSN: 2544-4646 | Journal ISSN: 1733-1331
Language: English
Page range: 117 - 124
Submitted on: Nov 7, 2022
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Accepted on: Feb 27, 2023
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Published on: Jun 14, 2023
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year

© 2023 Sindiswa L. Dube, Foluso O. Osunsanmi, Bongekile P. Ngcobo, Londiwe B. Mkhwanazi, Zanele Z. Jobe, Raphael T. Aruleba, Rebamang A. Mosa, Andrew R. Opoku, published by Polish Society of Microbiologists
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.