Critical Review of Fish Domestication in Aquaculture: Determinants, Processes, and Impacts
References
- Ahammad A. K. S., Asaduzzaman M., Ferdusy T., Islam M. M., Wong L. L., Rahman M. M., Haque M. M. and Hassan J., 2022 ‒ Morphogenetic diversity of the selected hatchery populations of an Indian major carp (Labeo rohita Hamilton 1822) in the Mymensingh region of Bangladesh, Animal Gene, 25,1, 1-11, DOI: 10.1016/j.angen.2022.200131.
- Alit A., Salam M. A., Alam M. S., Mazumder S. K. and Rahman M .L., 2023 – Domestication process influencing the growth, gonadal development and haematology of the endangered spiny eel (Mastacembelus armatus), Egyptian Journal of Aquatic Biology and Fisheries, 27, 319-343, DOI: 10.21608/ejabf.2023.301232.
- Álvarez D. and Nicieza A. G., 2003 – Predator avoidance behaviour in wild and hatchery-reared brown trout: the role of experience and domestication, Journal of Fish Biology, 63, 1565-1577, DOI: 10.1111/j.1095-8649.2003.00267.x.
- Anastasiadi D., Piferrer F. and Wittkopp P., 2019 – Epimutations in developmental genes underlie the onset of domestication in farmed European sea bass, Molecular Biology and Evolution, 36, 2256-2264, DOI: 10.1093/molbev/msz153.
- Baesjou J. P. and Wellenreuther M., 2021 – Genomic signatures of domestication selection in the Australasian snapper (Chrysophrys auratus), Genes, 12, 11, 1737, DOI: 10.3390/genes12111737.
- Chen D., Zhang Q., Tang W., Huang Z., Wang G., Wang Y., Shi J., Xu H., Lin L., Li Z., Chi W., Huang L., Xia J., Zhang X., Guo L., Wang Y., Ma P., Tang J., Zhou G., Liu M., Liu F., Hua X., Wang B., Shen Q., Jiang Q., Lin J., Chen X., Wang H., Dou M., Liu L., Pan H., Qi Y., Wu B., Fang J., Zhou Y., Cen W., He W., Zhang Q., Xue T., Lin G., Zhang W., Liu Z., Qu L., Wang A., Ye Q., Chen J., Zhang Y., Ming R., Van Montagu M., Tang H., Van De Peero Y., Chena Y. and Zhang J., 2020 – The evolutionary origin and domestication history of goldfish (Carassius auratus), Proceedings of the National Academy of Sciences of the United States of America, 117, 29775-29785, DOI: 10.1073/pnas.2005545117.
- Cheng Q. Q., Lu D. R. and Ma L., 2005 – Morphological differences between close populations discernible by multivariate analysis: a case study of genus coilia (Teleostei: Clupeiforms), Aquatic Living Resources, 18, 187-192, DOI: 10.1051/alr:2005020.
- Cheng X., Li F., Lu J., Wen Y., Li Z., Liao J., Cao J., He X., Sun J. and Liu Q., 2023 – Transcriptome analysis in gill reveals the adaptive mechanism of domesticated common carp to the high temperature in shallow rice paddies, Aquaculture, 578, 7, 740107, DOI: 10.1016/j.aquaculture.2023.740107.
- Christensen K. A., Brunelli J. P., Wheeler P. A. and Thorgaard G. H., 2014 – Antipredator behavior QTL: differences in rainbow trout clonal lines derived from wild and hatchery populations, Behavior Genetics, 44, 535-546, DOI: 10.1007/s10519-014-9663-9.
- Kucharczyk D., Jaczewski J., Nowosad J., Łuczyński M. K., Piech P., Dietrich G., Kucharczyk D. J., Kotsyumbas J. D. I. Y. W. P., Brezvyn M. O. M., Kucharczyk V. S. D and Jac J., 2023 – Artificial reproduction of the indoor-cultured brackish form of maraena whitefish (Coregonus maraena) under recirculated aquaculture system (RAS) conditions, Animal Reproduction Science, 257, 3, 107329, DOI: 10.1016/j.anireprosci.2023.107329.
- De Almeida T. R., Alix M., Cam A., Le K. C., Montfort J., Toomey L., Ledoré Y., Bobe J., Chardard D., Schaerlinger B. and Fontaine P., 2019 – Domestication may affect the maternal mRNA profile in unfertilized eggs, potentially impacting the embryonic development of Eurasian perch (Perca fluviatilis), PLoS ONE, 14, 1-25, DOI: 10.1371/journal.pone.0226878.
- Devlin R. H., Leggatt R. A. and Benfey T. J., 2020 – Genetic modification of growth in fish species used in aquaculture: Phenotypic and physiological responses, Fish Physiology, 38, 2037-272, DOI: 10.1016/bs.fp.2020.09.004.
- Diamond J., 1997 – Guns, germs and steel: the fate of human societies, guns, germs and steel: the fate of human societies, W. W. Norton and Company, New York, 480.
- Digard J.-P., 2009 – L’homme et les animaux domestiques, Anthropologie d’une passion, Collection, Le temps des sciences, Fayard, Paris, 326. (in French)
- Douxfils J., Lambert S., Mathieu C., Milla S., Mandiki S. N. M., Henrotte E., Wang N., Dieu M., Raes M., Rougeot C. and Kestemont P., 2014 – Influence of domestication process on immune response to repeated emersion stressors in Eurasian perch (Perca fluviatilis, L.), Comparative Biochemistry and Physiology Part A: Molecular and Integrative Physiology, 173, 52-60, DOI: 10.1016/j.cbpa.2014.03.012.
- Douxfils J., Mathieu C., Mandiki S. N. M., Milla S., Henrotte E., Wang N., Vandecan M., Dieu M., Dauchot N., Pigneur L. M., Li X., Rougeot C., Mélard C., Silvestre F., van Doninck K., Raes M. and Kestemont P., 2011 – Physiological and proteomic evidences that domestication process differentially modulates the immune status of juvenile Eurasian perch (Perca fluviatilis) under chronic confinement stress, Fish Shellfish Immunol, 31, 1113-1121, DOI: 10.1016/j.fsi.2011.10.00.
- Eriksson L. O., Alanara A., Nilsson J. and Brannas E., 2010 – The Arctic charr story: development of subarctic freshwater fish farming in Sweden, Hydrobiologia, 650, 265-274, DOI: 10.1007/s10750-010-0248-1.
- Etchegaray E., Baas D., Naville M., Haftek-Terreau Z., Volff J. N. and Volff J. N., 2022 – The neurodevelopmental gene msantd2 belongs to a gene family formed by recurrent molecular domestication of harbinger transposons at the base of vertebrates, Molecular biology and evolution, 39, 1-18, DOI: 10.1093/molbev/msac173.
- Gelli V. C., de Souza M. R., Plastino E. M. and Yokoya N. S., 2024 – Temperature as determinant factor on the generation of new strains of Kappaphycus alvarezii (Rhodophyta) cultivated in subtropical waters, Journal of Applied Phycologyl, 36, 537-544, DOI: 10.1007/s10811-023-03108-7.
- Gjedrem T., Robinson N. and Rye M., 2012 – The importance of selective breeding in aquaculture to meet future demands for animal protein: A review, Aquaculture, 350-353, 117-129, DOI: 10.1016/j.aquaculture.2012.04.008.
- Harlan J. R., 1992 – Views on agricultural origins, in Harlan J. R., Crops and man, American Society of Agronomy; Crop Science Society of America, 29-60, DOI: 10.2135/1992.cropsandman.c2.
- He S., You J. J., Liang X. F., Zhang Z. L. and Zhang Y. P., 2021 – Transcriptome sequencing and metabolome analysis of food habits domestication from live prey fish to artificial diets in mandarin fish (Siniperca chuatsi), BMC Genomics, 22, 129, 1-12, DOI: 10.1186/s12864-021-07403-w.
- Horreo J. L., Valiente A. G., Ardura A., Blanco A., Garcia-Gonzalez C. and Garcia-Vazquez E., 2017 – Nature versus nurture? Consequences of short captivity in early stages, Ecology and Evolution, 8, 1, 521-529, DOI: 10.1002/ece3.3555.
- Huntingford F. A., Adams C., Braithwaite V. A., Kadri S., Pottinger T. G., Sandøe P. and Turnbull J. F., 2006 – Current issues in fish welfare, Journal of Fish Biology, 68, 332-372, DOI: 10.1111/j.0022-1112.2006.001046.x.
- Jiang Y., Zhang S., Xu J., Feng J., Mahboob S., Al-Ghanim K. A., Sun X. and Xu P., 2014 – Comparative transcriptome analysis reveals the genetic basis of skin color variation in common carp, PloS One, DOI: 10.1371/journal.pone.0108200.
- Khendek A., Alix M., Viot S., Ledoré Y., Rousseau C., Mandiki R., Kestemont P., Policar T., Fontaine P. and Milla S., 2017 – How does a domestication process modulate oogenesis and reproduction performance in Eurasian perch? Aquaculture, 473, 206-214, DOI: 10.1016/j.aquaculture.2017.02.003.
- Khendek A., Chakraborty A., Roche J., Ledoré Y., Personne A., Policar T., Zarski D., Mandiki R., Kestemont P., Milla S. and Fontaine P., 2018 – Rearing conditions and life history influence the progress of gametogenesis and reproduction performances in pikeperch males and females, Animal, 12, 11, 2335-2346, DOI: 10.1017/S1751731118000010.
- Klinger D. and Naylor R., 2012 – Searching for solutions in aquaculture : charting a sustainable course, Annual Review of Environment and Resources, 37, 247-276 DOI: 10.1146/annurev-environ-021111-161531.
- Konstantinidis I., Sætrom P., Mjelle R., Nedoluzhko A. V, Robledo, D. and Fernandes, J. M. O., 2020 – Major gene expression changes and epigenetic remodelling in Nile tilapia muscle after just one generation of domestication, Epigenetics, 15, 10, 1052-1067, DOI: 10.1080/15592294.2020.1748914.
- Larson G., Piperno D. R., Allaby R. G., Purugganan M. D., Andersson L., Arroyo-Kalin M., Barton L., Vigueira C. C., Denham T., Dobney K., Doust A. N., Gepts P., Gilbert M. T. P., Gremillion K. J., Lucas L., Lukens L., Marshall F. B., Olsen K. M., Pires J. C., Richerson P. J., De Casas R. R., Sanjur O. I., Thomas M. G. and Fuller D. Q., 2014 – Current perspectives and the future of domestication studies, Proceedings of the National Academy of Sciences of the United States of America, 111, 6139-6146, DOI: 10.1073/pnas.1323964111.
- Liao I. C. and Huang, Y. S., 2000 – Methodological approach used for the domestication of potential candidates for aquaculture, Recent advances in Mediterranean aquaculture finfish species diversification, Cahiers Options Méditerranéennes, 47, 97-107.
- Lorenzen E. D., Heller R. and Siegismund H. R., 2012 – Comparative phylogeography of African Savannah ungulates, Molecular Ecology, 21, 3656-3670, DOI: 10.1111/j.1365-294X.2012.05650.x.
- Maroso F., Gkagkavouzis K., de Innocentiis S., Hillen J., do Prado F., Karaiskou N., Taggart J.. B., Carr A., Nielsen E., Triantafyllidis A., Bargelloni L., Bekkevold D., Frank-Gopolos T., Franch R., Ferraresso S., Babbucci M., Greco C., Crosetti D., Simionati B., Malacrida G., Martinez P., Vera M., Hermida M., do Prado F. D., Cabaleiro S., Castro I. V., Volckaert F., Maes G., Hellemans B., Hofherr J., Martinsohn J., Ferretti M., Ogden R., Taylor M., Beckaert M., Webster L., Bylesjo M., Turan C., Haffrey P., Genestout L. and Pagelson G., 2021 – Genome-wide analysis clarifies the population genetic structure of wild gilthead sea bream (Sparus aurata), PLoS ONE, 16, 1-16. DOI: 10.1371/journal.pone.0236230.
- Marsden G., Richardson N., Mather P. and Knibb W., 2013 ‒ Reproductive behavioural differences between wild-caught and pond-reared Penaeus monodon prawn broodstock, Aquaculture, 402-404, 141-145, DOI: 10.1016/j.aquaculture.2013.03.019.
- McDermid J. L., Sloan W. N., Wilson C. C. and Shuter B. J., 2010 – Early life history variation among hatchery and wild‐origin lake trout reared in a hatchery environment, Transactions of the American Fisheries Society, 139, 21-28, DOI: https://doi.org/10.1577/t08-130.1
- Milla S., Pasquet A., El Mohajer L. and Fontaine P., 2020 ‒ How domestication alters fish phenotypes, Review in Aquaculture, 13, 12, 388-405, DOI: 10.1111/raq.12480.
- Palińska-Żarska K., Woźny M., Kamaszewski M., Szudrowicz H., Brzuzan P. and Żarski D., 2020 – Domestication process modifies digestion ability in larvae of Eurasian perch (Perca fluviatilis), a freshwater Teleostei, Scientific Reports, 10, 1-12, DOI: 10.1038/s41598-020-59145-6.
- Priyadi A., Permana A., Kusrini E., Hayuningtyas E. P., Nur B., Lukman, South J., Cindelaras S., Rohmy S., Ginanjar R., Yamin M., Said D. S., Kadarini T. and Budi D. S., 2024 – Captive breeding of endangered betta fish, Betta rubra, under laboratory conditions, Fisheries and Aquatic Sciences, 27, 213-224, DOI: 10.47853/FAS.2024.e21.
- Shen Y., Li H., Zhao J., Tang S., Zhao Y., Bi Y. and Chen X., 2021 –The digestive system of mandarin fish (Siniperca chuatsi) can adapt to domestication by feeding with artificial diet, Aquaculture, 538, 736546, DOI: 10.1016/j.aquaculture.2021.736546.
- Smith J. A., 2011 – Evaluating the contribution of interpretative phenomenological analysis, Health Psychology Review, 5, 9-27, DOI: 10.1080/17437199.2010.510659.
- Teletchea F. and Fontaine P., 2014 – Levels of domestication in fish: Implications for the sustainable future of aquaculture, Fisheries, 15, 181-195, DOI: 10.1111/faf.12006.
- Toth B., Khosravi R., Bagi Z., Feher M., Barsony P., Kovacs G., Kusza S. and Ashrafzadeh M. R., 2022 – Insights into mitochondrial DNA variation of common carp Cyprinus carpio strains in the Centre of Carpathian Basin, Aquaculture, 554, 11, 738116, DOI: 10.1016/j.aquaculture.2022.738116.
- Triplet P., 2015 – Dictionnaire de la diversité biologique et de la conservation de la nature, 4ᵉ éd., Initiative méditerranéenne pour les zones humides et Organisation pour la gestion des oiseaux migrateurs et de leurs habitats, 722. (in French)
- Vandeputte M. and Prunet P., 2002 – Génétique et adaptation chez les poissons: Domestication, résistance au stress et adaptation aux conditions de milieu, Productions Animales, 15, 365-371, DOI: 10.20870/productions-animales.2002.15.5.3716.
- Vigne J. D., 2015 –Early domestication and farming : what should we know or do for a better understanding ? Anthropogenica, 50, 2, 123-150, DOI: 10.5252/az2015n2a5.
- Weber G. M. and Lee C. S., 2013 ‒ Current and future assisted reproductive technologies for fish species, in Lamb G. and Dilorenzo N. (eds), Current and future reproductive technologies and world food production, Advances in experimental medicine and biology, Springer, New York, 752, DOI: 10.1007/978-1-4614-8887-3_3.
- Wilson C. A., High S. K., McCluskey B. M., Amores A., Yan Y. L., Titus T. A., Anderson J. L., Batzel P., Carvan M. J., Schartl M. and Postlethwait J. H., 2014 – Wild sex in zebrafish: Loss of the natural sex determinant in domesticated strains, Genetics, 198, 1291-1308, DOI: 10.1534/genetics.114.169284.
- Wringe B. F., Devlin R. H., Ferguson M. M., Moghadam H. K., Sakhrani D. and Danzmann R. G., 2010 – Growth-related quantitative trait loci in domestic and wild rainbow trout (Oncorhynchus mykiss), BMC Genetics, 11, 63, 1-14, DOI: 10.1186/1471-2156-11-63.
- Xu L. H., Wang C. H., Wang J., Dong Z. J., Ma Y. Q. and Yang X. X., 2012 – Selection pressures have driven population differentiation of domesticated and wild common carp (Cyprinus carpio L.), Genetics and Molecular Research, 11, 3, 3222-3235, DOI: 10.4238/2012.
- Żarski D., Le Cam A., Nynca J., Klopp C., Ciesielski S., Sarosiek B., Montfort J., Król J., Fontaine P., Ciereszko A. and Bobe J., 2020 ‒ Domestication modulates the expression of genes involved in neurogenesis in high-quality eggs of Sander lucioperca, Molecular Reproduction and Development, 87, 934-951, DOI: 10.1002/mrd.23414
- Zeder M. A., 2012 – The domestication of animals, Reviews in Anthropology, 68, 161-171, DOI: 10.1080/00988157.1982.9977605.
- Zhang F., Wang S., Peng Y., Miao L., Cao T. and Wang Z., 2016 – Start-up and characterization of nitrogen and COD removal from mature landfill leachate via CANON process, Journal of the Chemical Industry and Engineering Society of China, 67, 9, 3910-3918, DOI: 10.11949/j.issn.0438-1157.20160144.
- Zulfadhli Fadhillah R., Jusadi D. and Fujaya Y., 2023 – Domestication of Bileh Fish Rasbora sp. origin of aceh waters dhrough different feed therapy, IOP Conference Series: Earth and Environmental Science 1147, DOI: 10.1088/1755-1315/1147/1/012016.
Language: English
Page range: 91 - 106
Published on: May 15, 2026
Published by: Lucian Blaga University of Sibiu
In partnership with: Paradigm Publishing Services
Publication frequency: 3 issues per year
Keywords:
Related subjects:
© 2026 Sébastien Kpossou, Simon Ahouansou Montcho, Idossou Ayodédji Clovis Hountcheme, Hyppolite Agadjihouede, published by Lucian Blaga University of Sibiu
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.