References
- Abraham T.J., Paul P., Adikesavalu H., Patra A., Banerjee S.: Stenotrophomonas maltophilia as an opportunistic pathogen in cultured African catfish Clarias gariepinus (Burchell, 1822). Aquaculture 2016, 450, 168-172, doi: 10.1016/j.aquaculture.2015.07.015.
- Altinok I., Balta F., Capkin E., Kayis S.: Disease of rainbow trout caused by Pseudomonas luteola. Aquaculture 2007, 273, 393397, doi: 10.1016/j.aquaculture.2007.10.025.
- Altinok I., Kayis S., Capkin E.: Pseudomonas putida infection in rainbow trout. Aquaculture 2006, 261, 850-855, doi:10.1016/j.aquaculture.2006.09.009.
- Austin B.: The effects of pollution on fish health. J Appl Microbiol 1998, 85, 234S-242S, doi: 10.1111/j.1365-2672.1998.tb05303.x.
- Austin B.: The bacterial microflora of fish, revised. Sci World J 2006, 6, 931-934, doi: 10.1100/tsw.2006.181.
- Bagge J., Bagge O.: Vibrio anguillarum som årsag til sygdom hos torsk (Gadus callarias, Linne) (Vibrio anguillarum as cause of the ulcer disease in cod (Gadus callarias, Linne)-in Danish). Nord Vet Med 1956, 8, 481-492.
- Bagge O., Thurow F.: The Baltic cod stock: fluctuations and possible causes. ICES Mar Sci Symp 1994, 198, 254-268.
- Berner A.F., Mattheis T.: Ulcer cod among the landings of the fishing fleet from Sassnitz. Fischzeitung Zeitung Radebeul 1959, 6, 224-229.
- Berthe F.C., Michel C., Bernardet J.F.: Identification of Pseudomonas anguilliseptica isolated from several fish species in France. Dis Aquat Org 1995, 21, 151-155, doi:10.3354/dao021151.
- Brettar I., Christen R., Hofle M.G.: Shewanella denitrificans sp. nov., a vigorously denitrifying bacterium isolated from the oxic-anoxic interface of the Gotland Deep in the central Baltic Sea. Int J Syst Evol Microbiol 2002, 52, 2211-2217, doi: 10.1099/ijs.0.02255-0.
- Brooke J.S.: Stenotrophomonas maltophilia: an emerging global opportunistic pathogen. Clin Microbiol 2012, 25, 2-41, doi: 10.1128/CMR.00019-11.
- Bucker D., Vethaak A.D., Lang T., Mellergaard S.: Common diseases and parasites of fish in the North Atlantic: Training guide for identification. ICES Tech Mar Environ Sci 1996, 19, 27, doi: 10.25607/OBP-255.
- Buller N.B.: Bacteria and fungi from fish and other aquatic animals: a practical identification manual. CABI Publishing, Wallingford, 2014, 168-176, doi: 10.1079/9781845938055.0001.
- Chen Y.S., Liu Y.C., Yen M.Y., Wang J.H., Wang J.H., Wann S.R., Cheng D.L.: Skin and soft-tissue manifestations of Shewanella putrefaciens infection. Clin Infect Dis 1997, 25, 225229, doi: 10.1086/514537.
- Cipriano R.C., Bullock G.L., Pyle S.W.: Aeromonas hydrophila and motile aeromonad septicemias offish. US Fish Wildlife Service Publications, Washington, D.C., 1984, 134,https://digitalcommons.unl.edu/usfwspubs/134.
- Clinical and Laboratory Standards Institute: VET04-A2 Methods for broth dilution susceptibility testing of bacteria isolated from aquatic animals. Approved guideline — Second Edition, C LSI, Wayne, PA, 2014.
- Dyner E., Waluga D., Swiatecki A.: A preliminary evaluation of some diseases found in certain species of the Baltic Sea fishes. Committee Meeting C.M. 1984/E:34, International Council for the Exploration of the Sea, Copenhagen, 1984.
- Eissa N.M.E., El-Ghiet E.A., Shaheen A.A., Abbass A.: Characterization of Pseudomonas species isolated from tilapia Oreochromis niloticus in Qaroun and Wadi-El-Rayan lakes, Egypt. Glob Vet 2010, 5, 116-121, doi: 10.13140/2.1.5002.4961.
- Esteve C., Amaro C., Garay E., Santos Y., Toranzo A.E.: Pathogenicity of live bacteria and extracellular products of motile Aeromonas isolated from eels. J App Bacteriol 1995, 78, 555-562, doi: 10.1111/j.1365-2672.1995.tb03099.x.
- European Medicines Agency: Categorisation of antibiotics used in animals promotes responsible use to protect public and animal health. EMA/688114/2020, EMA, Amsterdam, 2020,
- https://www.ema.europa.eu/en/news/categorisation-antibiotics-used-animals-promotes-responsible-use-protect-public-animal-health.
- Food and Agriculture Organization of the United Nations: The state of world fisheries and aquaculture 2018-Meeting the sustainable development goals. FAO, Rome, 2018.
- Geng Y., Kaiyu W., Chen D., Huang X., He M., Yin Z.: Stenotrophomonas maltophilia, an emerging opportunist pathogen for cultured channel catfish, Ictalurus punctatus, in China. Aquaculture 2010, 308, 132-135, doi:10.1016/j.aquaculture.2010.08.032.
- Grawiński E., Kozińska A., Paździor E.: Badania nad patologią ryb południego Bałtyku-przegląd (Studies on the pathology of South Baltic Sea fish-a review-in Polish). Życie Wet 2013, 88, 851-860.
- Grawiński E., Podolska M., Kozińska A., Pękala A.: Bakterie chorobotwórcze dla ryb i człowieka od dorszy bałtyckich (Bacteria pathogenic for fish and humans isolated from Baltic cod-in Polish). Życie Wet 2009, 84, 409-416.
- Grilo M.L., Sousa-Santos C., Robalo J., Oliveira M.: The potential of Aeromonas spp. from wildlife as antimicrobial resistance indicators in aquatic environments. Ecol Indic 2020, 115, 106396, doi: 10.1016/j.ecolind.2020.106396.
- Gusev A.: Baltic Sea Environment Fact Sheet-Atmospheric deposition of heavy metals to the Baltic Sea. Baltic Marine Environment Protection Commission/Helsinki Commission-HELCOM, Helsinki, 2019.
- Helsinki Commission-HELCOM: Report on chemical munitions dumped in the Baltic Sea. Report to the 16th Meeting of Helsinki Commission 8-11 March 1994 from the Ad Hoc Working Group on Dumped Chemical Munition (HELCOM CHEMU). Danish Environmental Protection Agency, Odense, 1994, https://helcom.fi/wp-content/uploads/2019/10/Report-on-chemical-munitions-dumped-in-the-Baltic-Sea.pdf.
- Helsinki Commission-HELCOM: Third periodic assessment of the state of the marine environment of the Baltic Sea, 1989-1993. Executive Summary. Balt Sea Environ Proc No. 64A. HELCOM, Helsinki, 1996, https://helcom.fi/wp-content/uploads/2019/10/BSEP64a.pdf
- Helsinki Commission-HELCOM: Hazardous substances in the Baltic Sea. An integrated thematic assessment of hazardous substances in the Baltic Sea. Executive Summary. Balt Sea Environ Proc No. 120B. HELCOM, Helsinki, 2010, https://helcom.fi/media/publications/BSEP120B.pdf.
- International Council for the Exploration of the Sea: Report of the ICES/BSRP Sea-going Workshop on Fish Disease Monitoring in the Baltic Sea (WKFDM), 5-12 December 2005, ICES Committee Meeting CM 2006/BCC:02. ICES, Copenhagen, 2006, https://www.ices.dk/sites/pub/CM%20Doccuments/2006/BCC/w kfdm06.pdf.
- International Council for the Exploration of the Sea: ICES Advice on fishing opportunities, catch, and effort-Baltic Sea ecoregion. Cod (Gadus morhua) in subdivisions 24-32, eastern Baltic stock (eastern Baltic Sea) 2019. ICES, Copenhagen, 2019, doi: 10.17895/ices.advice.4747.
- International Council for the Exploration of the Sea: ICES Fisheries overviews-Baltic Sea Ecoregion-Fisheries overview. ICES, Copenhagen, 2019, doi: 10.17895/ices.advice.5566.
- Jensen N.J., Larsen J.L.: The ulcus-syndrome in cod (Gadus morhua) I. A pathological and histopathological study. Nord Vet Med 1979, 31, 222-228.
- Jorgensen B.R., Huss H.H.: Growth and activity of Shewanella putrefaciens isolated from spoiling fish. Int J Food Microbiol 1989, 9, 51-62, doi: 10.1016/0168-1605(89)90037-8.
- Jung-Schroers V., Jung A., Ryll M., Bauer J., Teitge F., Steinhagen D.: Methods for identification and differentiation of different Shewanella spp. isolates for diagnostic use. J Fish Dis 2018, 41, 689-714, doi: 10.1111/jfd.12772.
- Kosior M., Grygiel W., Kuczynski J., Radtke K., Wyszynski M.: Assessment of the health state of fish of the southern Baltic; observations of externally visible symptoms of diseases. Bull Sea Fish Inst 1997, 3, 3-25.
- Kozińska A.: Dominant pathogenic species of mesophilic aeromonads isolated from diseased and healthy fish cultured in Poland. J Fish Dis 2007, 30, 293-301, doi: 10.1111/j.1365-2761.2007.00813.x.
- Kozińska A., Paździor E., Pękala A., Niemczuk W.: Acinetobacter johnsonii and Acinetobacter lwoffii-the emerging fish pathogens.Bull Vet Inst Pulawy 2014, 58, 193-199, doi: 10.2478/bvip-2014-0029.
- Kozińska A., Pękala A.: Characteristics of disease spectrum in relation to species, serogroups, and adhesion ability of motile aeromonads in fish. Sci World J 2012, 2012, 949358, doi: 10.1100/2012/949358.
- Lang T.: Fish disease survey in environmental monitoring: the role of ICES. ICES Mar Sci Symposia 2002, 215, 202-210.
- Lang T., Straumer K.: Decision aid for marine munitions (DAIMON) Ecotox Toolbox Fact Sheet 3.16: Externally visible fish diseases (EVFD). Interreg Project DAIMON, Interreg Baltic Sea Region, Rostock, 2019,https://www.thuenen.de/media/institute/fi/Meeresumwelt/DAIM ON_Ecotox_Toolbox/DAIMON_Toolbox_Fact_Sheet_3.16_EV FD_TIFI_NEW_TL.pdf.
- Mellergaard S., Bagge O.: Fishing gear-induced skin ulcerations in Baltic cod, Gadus morhua L. J Fish Dis 1998, 21, 205-213, doi: 10.1046/j.1365-2761.1998.00095.x.
- Odeyemi O.A., Alegbeleye O.O., Strateva M., Strate D.: Understanding spoilage microbial community and spoilage mechanisms in foods of animal origin. Compr Rev Food Sci Food Saf 2020, 19, 311-331, doi.: 10.1111/1541-4337.12526.
- Oh W.T., Kim J.H., Jun J.W., Giri S.S., Yun S., Kim H.J., Kim S.G., Kim S.W., Han S.J., Kwon J., Park S.C.: Genetic characterization and pathological analysis of a novel bacterial pathogen, Pseudomonas tructae, in rainbow trout (Oncorhynchus mykiss). Microorganisms 2019, 7, 432, doi: 10.3390/microorganisms7100432.
- Paździor E., Bomba A., Tluścik K., Nadolna-Ałtyn K., Podolska M., Reichert M., Wasyl D., Pękala-Safińska A.: Phylogenetic analysis of Shewanella spp. isolated from fish. J Fish Dis 2023, 46, 1163-1171, doi: 10.1111/jfd.13834.
- Paździor E., Pękala-Safińska A., Wasyl D.: Genotypic diversity among Shewanella spp. collected from freshwater fish. J Fish Dis 2019, 42, 677-684, doi: 10.1111/jfd.12971.
- Paździor E., Pękala-Safińska A., Wasyl D.: Phenotypic diversity and potential virulence factors of the Shewanella putrefaciens group isolated from freshwater fish. J Vet Res 2019, 63, 321-332, doi: 10.2478/jvetres-2019-0046.
- Pękala A., Kozinska A., Pazdzior E., Głowacka H.: Phenotypical and genotypical characterization of Shewanella putrefaciens strains isolated from diseased freshwater fish. J Fish Dis 2015, 38, 283-293, doi: 10.1111/jfd.12231.
- Pękala-Safińska A.: Contemporary threats of bacterial infections in freshwater fish. J Vet Res 2018, 62, 261-267, doi: 10.2478/jvetres-2018-0037.
- Sakai M., Atsuta S., Kobayashi M.: Pseudomonas fluorescens isolated from the diseased rainbow trout, Oncorhynchus mykiss. Kistato Arch Exp Med 1989, 62, 157-162.
- Salinas I., Díaz-Rosales P., Alberot C., Meseguer J., Chabrillón M., Moriñigo M.A., Esteban M.A.: Effect of heat-inactivated fish and non-fish derived probiotics on the innate immune parameters of a teleost fish (Sparus aurata L.). Vet Immunol Immunopathol 2006, 111, 279-286, doi: 10.1016/j.vetimm.2006.01.020.
- Satomi M., Vogel B.F., Gram L., Venkateswaran K.: Shewanella hafniensis sp. nov. and Shewanella morhuae sp. nov., isolated from marine fish of the Baltic Sea. Int J Syst Evol Microbiol 2006, 56, 243-249, doi: 10.1099/ijs.0.63931-0.
- Silley P.: Susceptibility testing methods, resistance and breakpoints: what do these terms really mean? Rev Sci Tech 2012, 31, 33-41, doi: 10.20506/rst.31.1.2097.
- Smith P.: Eight rules for improving the quality of papers on the antimicrobial susceptibility of bacteria isolated from aquatic animals. Dis Aquat Org 2020, 139, 87-92, doi:10.3354/doa03476.
- Tamura K., Nei M.: Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol Biol Evol 1993, 10, 512-526, doi: 10.1093/oxfordjournals.molbev.a040023.
- Vogel B.F., Venkateswaran K., Satomi M., Gram L.: Identification of Shewanella baltica as the most important H2S-producing species during iced storage of Danish marine fish. Appl Environ Microbiol 2005, 71, 6689-6697, doi:10.1128/AEM.71.11.6689-6697.2005.
- Wahli T., Burr S.E., Pugovkin D., Mueller O., Frey J.: Aeromonas sobria, a causative agent of disease in farmed perch, Perca fluviatilis L. J Fish Dis 2005, 28, 141-150, doi: 10.1111/j.1365-2761.2005.00608.x.
- Wiklund T., Bylund G. : Skin ulcer disease of flounder Platichthys flesus in the northern Baltic Sea. Dis Aquat Org 1993, 17, 165-174, doi: 10.3354/dao017165.