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Modeling and Analysis of Root Branching Plasticity Based on Parrondo's Game Cover

Modeling and Analysis of Root Branching Plasticity Based on Parrondo's Game

By: Songyang Li,  Miao Wang and  Haipeng Yu  
Open Access
|Oct 2022

References

  1. Barczi J. F., Rey H., Griffon S., Jourdan C. 2018. DigR: a generic model and its open source simulation software to mimic three-dimensional root-system architecture diversity. Annals of Botany 121(5): 1089–1104. DOI: 10.1093/aob/mcy018.
  2. Cabal C., Martínez-García R., de Castro Aguilar A., Valladares F., Pacala S.W. 2020. The exploitative segregation of plant roots. Science 370(6521): 1197–1199. DOI: 10.1126/science.aba9877.
  3. Diggle A.J. 1988. ROOTMAP – a model in three-dimensional coordinates of the growth and structure of fibrous root systems. Plant and Soil 105(2): 169–178. DOI: 10.1007/bf02376780.
  4. Dener E., Kacelnik A., Shemesh H. 2016. Pea plants show risk sensitivity. Current Biology 26(13): 1763–1767. DOI: 10.1016/j.cub.2016.05.008.
  5. Dubrovsky J.G., Gambetta G.A., Hernández-Barrera A., Shishkova S., González I. 2006. Lateral root initiation in Arabidopsis: developmental window, spatial patterning, density and predictability. Annals of Botany 97(5): 903–915. DOI: 10.1093/aob/mcj604.
  6. Giehl R.F.H., Lima J.E., von Wirén N. 2012. Localized iron supply triggers lateral root elongation in Arabidopsis by altering the AUX1-mediated auxin distribution. Plant Cell 24(1): 33–49. DOI: 10.1105/tpc.111.092973.
  7. Gifford M.L., Dean A., Gutierrez R.A., Coruzzi G.M., Birnbaum K.D. 2008. Cell-specific nitrogen responses mediate developmental plasticity. Proceedings of the National Academy of Sciences 105(2): 803–808. DOI: 10.1073/pnas.0709559105.
  8. Harmer G.P., Abbott D. 1999. Losing strategies can win by Parrondo's paradox. Nature 402(6764): 864. DOI: 10.1038/47220.
  9. Jing H., Strader L.C. 2019. Interplay of auxin and cytokinin in lateral root development. International Journal of Molecular Sciences 20(3); 486; 12 p. DOI: 10.3390/ijms20030486.
  10. Li S., Liu X., Wang M., Yu W. 2016. Exploring root plasticity to resource patches based on swarm behavior. Acta Physiologiae Plantarum 38(8); 192; 10 p. DOI: 10.1007/s11738-016-2227-2.
  11. McCleery W.T., Mohd-Radzman N.A., Grieneisen V.A. 2017. Root branching plasticity: collective decision-making results from local and global signalling. Current Opinion in Cell Biology 44: 51–58. DOI: 10.1016/j.ceb.2017.03.001.
  12. Muller B., Guédon Y., Passot S., Lobet G., Nacry P., Pagès L. et al. 2019. Lateral roots: Random diversity in adversity. Trends in Plant Science 24(9): 810–825. DOI: 10.1016/j.tplants.2019.05.011.
  13. Ötvös K., Marconi M., Vega A., O’ Brien J., Johnson A., Abualia R. et al. 2020 Modulation of plant root growth by nitrogen source-defined regulation of polar auxin transport. EMBO Journal 40(3); 106862; 21 p. DOI: 10.15252/embj.2020106862.
  14. Pagès L. 2019. Analysis and modeling of the variations of root branching density within individual plants and among species. Frontiers in Plant Science 10; 1020; 10 p. DOI: 10.3389/fpls.2019.01020.
  15. Pagès L., Picon-Cochard C. 2014. Modelling the root system architecture of Poaceae. Can we simulate integrated traits from morphological parameters of growth and branching? New Phytologist 204: 149–158. DOI: 10.1111/nph.12904.
  16. Pagès L., Bécel C., Boukcim H., Moreau D., Nguyen C., Voisin A.-S. 2014. Calibration and evaluation of ArchiSimple, a simple model of root system architecture. Ecological Modelling 290: 76–84. DOI: 10.1016/j.ecolmodel.2013.11.014.
  17. Ye Y., Wang L., Xie N. 2013. Parrondo's games based on complex networks and the paradoxical effect. PLoS One 8(7); e67924; 11 p. DOI: 10.1371/journal.pone.0067924.
  18. Zhang H., Forde B.G. 1998. An arabidopsis MADS box gene that controls nutrient-induced changes in root architecture. Science 279(5349): 407–409. DOI: 10.1126/science.279.5349.407.
DOI: https://doi.org/10.2478/johr-2022-0013 | Journal eISSN: 2353-3978 | Journal ISSN: 2300-5009
Language: English
Page range: 23 - 32
Submitted on: Dec 1, 2021
Accepted on: Jul 1, 2022
Published on: Oct 1, 2022
Published by: National Institute of Horticultural Research
In partnership with: Paradigm Publishing Services
Publication frequency: 2 issues per year

© 2022 Songyang Li, Miao Wang, Haipeng Yu, published by National Institute of Horticultural Research
This work is licensed under the Creative Commons Attribution 4.0 License.