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Molecular detection and COX1-based phylogenetic placement of Dipylidium caninum caninum in stray dogs from Iğdır Province, eastern Türkiye Cover

Molecular detection and COX1-based phylogenetic placement of Dipylidium caninum caninum in stray dogs from Iğdır Province, eastern Türkiye

Open Access
|Sep 2026

Figures & Tables

Supplementary Table S1.

BLASTn comparison and phylogenetic dataset of Dipylidium caninum COX1 sequences

No.AccessionIsolate / descriptionHostCountryIdentity (%)Query coverSequence length (bp)
1PZ299077.1D. caninum isolate Igdir_Dog1Shepherd dog / Canis lupus familiarisTürkiye100100 %396
2PX765914.1D. caninum isolate Hp03DogGhana92.1293 %373
3OR251824.1D. caninum isolate Sv_PS_Amz_22Speothos venaticus / bush dogColombia91.92100 %1602
4OR251823.1D. caninum isolate Sv_PS_Amz_21Speothos venaticus / bush dogColombia91.92100 %1602
5OK523384.1D. caninum isolate Dcan_canine_FL1, complete mitogenomeCanis lupus familiarisUSA91.92100 %14296
6PZ165824.1D. caninum isolate DICAACanis lupus familiarisCroatia91.92100 %396
7PX765913.1D. caninum isolate Hp02DogGhana91.8593 %373
8PX765912.1D. caninum isolate Hp01DogGhana91.8593 %373
10MN099047.1D. caninum complete mitogenomeStray dogChina91.67100 %14226
11PP842203.1D. caninum isolate DogSRTDc2DogTürkiye91.2795 %383
12PP842202.1D. caninum isolate DogSRTDc1DogTürkiye91.2795 %383
13MG587892.1D. caninum isolate R166, complete mitogenomeFelineSouth Africa89.899 %13598
14OQ281679.1D. caninum isolate VCG6Felis catusMexico89.899 %416
15OK523385.1D. caninum isolate Dcan_feline_KS1, complete mitogenomeFelis catusUSA89.899 %13598
16MT806359.1D. caninum voucher 4245P18Vulpes vulpes / red foxItaly89.899 %411
17PX765915.1D. caninum isolate Hp04DogGhana89.6793 %373
18OR511473.1D. caninum isolate Alex-2Stray catEgypt89.5392 %363
19PZ165825.1D. caninum isolate DICAB.1Felis catusCroatia89.3990 %358
20ON506044.1D. caninum isolate Isb1CatPakistan89.3492 %384
21PP054312.1D. caninum haplotype AFelis catus familiarisEthiopia89.2796 %963
22OR511472.1D. caninum isolate Alex-1Stray catEgypt88.7192 %363
23ON954760.1D. caninum isolate dog1DogIraq88.0192 %384
24ON954628.1D. caninum isolate cat1CatIraq88.0192 %384
25ON514129.1D. caninum isolate Isb2CatPakistan88.0192 %384
26ON954763.1D. caninum isolate cat1CatIraq87.9192 %383
27ON954761.1D. caninum isolate dog2DogIraq86.5892 %384
28PP054311.1Dipylidium sp. 01-SA haplotype AProteles cristata / aardwolfSouth Africa85.86100 %1647
29PZ165826.1D. caninum isolate DICAB.2Canis lupus familiarisCroatia358
30ON954762.1D. caninum isolate dog3DogIraq384
31ON954764.1D. caninum isolate cat2CatIraq384
32ON954765.1D. caninum isolate cat3CatIraq384
Supplementary Fig. S1.

Global prevalence of Dipylidium caninum in dogs.

Reported canine D. caninum prevalence data from previously published studies were descriptively summarized by continent and country to provide broad epidemiological context. (A) Prevalence values across continents. Box plots show the median, interquartile range, and individual study points. (B) Country-level prevalence grouped by continent. Colored points represent individual studies according to approximate mid-study year. No molecular sequence data were included in this overview. Because the included studies differed in sampling design, dog population, geographic setting, and diagnostic method, this figure should be interpreted only as descriptive context and not as a formal quantitative comparison among regions.

Fig. 1.

Maximum Likelihood phylogenetic tree based on a 363-bp COX1 alignment of Dipylidium caninum and related Dipylidiidae sequences.

The tree was reconstructed in IQ-TREE v3 using the GTR+I+G substitution model and rooted with Joyeuxiella pasqualei ON981095 as the outgroup. Branch values are shown as SH-aLRT support (%) / ultrafast bootstrap support (%) based on 1,000 replicates. The Turkish isolate generated in this study, PZ299077.1, is highlighted in red.

Fig. 2.

Geographic and temporal distribution of Dipylidium caninum in Türkiye.

The map and accompanying bar plot summarize published prevalence data from 2006 to 2025 across different provinces of Türkiye. Coprological and necropsy-based surveys are shown in light shading, whereas PCR-based studies are shown in dark shading. The figure illustrates the long-term and widespread circulation of D. caninum in both western and eastern regions of the country.

DOI: https://doi.org/10.2478/helm-2026-0011 | Journal eISSN: 1336-9083 | Journal ISSN: 0440-6605
Language: English
Page range: 99 - 108
Submitted on: Jan 3, 2026
Accepted on: Jun 15, 2026
Published on: Sep 7, 2026
Published by: Slovak Academy of Sciences, Institute of Parasitology
In partnership with: Paradigm Publishing Services
Publication frequency: Volume open

© 2026 F. E. Oğuz, A. Ayan, H. Öztürk, A. H. Kirmizigül, published by Slovak Academy of Sciences, Institute of Parasitology
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.