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Simple, inexpensive, and rapid approach to detect changes in the structure of soil free-living nematodes Cover

Simple, inexpensive, and rapid approach to detect changes in the structure of soil free-living nematodes

Open Access
|Apr 2024

References

  1. Andrássy, I. (2005): Free-living nematodes of Hungary Nematoda errantia, Volume I. Budapest, Hungarian Natural History Museum and Systematic Zoology Research Group of the Hungarian Academy of Sciences, 518 pp.
  2. Andrássy, I. (2007): Free-living nematodes of Hungary Nematoda errantia, Volume II. Budapest: Hungarian Natural History Museum and Systematic Zoology Research Group of the Hungarian Academy of Sciences, 496 pp.
  3. Andrássy, I. (2009): Free-living nematodes of Hungary Nematoda errantia, Volume III. Budapest: Hungarian Natural History Museum and Systematic Zoology Research Group of the Hungarian Academy of Sciences, 608 pp.
  4. Beng, K.C., Corlett, R.T. (2020): Applications of environmental DNA (eDNA) in ecology and conservation: Opportunities, challenges and prospects. Biodivers Conserv, 29: 2089 – 2121. DOI: 10.1007/s10531-020-01980-0
  5. Bogale, M., Baniya, A., DiGennaro, P. (2020): Nematode identification techniques and recent advances. Plants, 9(10): 1260. DOI: 10.3390/plants9101260
  6. Bongers, T. (1990): The maturity index: An ecological measure of environmental disturbance based on nematode species composition. Oecologia, 83: 14 – 19. DOI: 10.1007/BF00324627
  7. Čerevková, A. (2006): Nematode communities in three types of grassland in the Slovak Republic. Helminthologia, 43(3): 171 – 176. DOI: 10.2478/s11687-006-0032-y
  8. Čerevková, A., Miklisová, D., Szoboszlay, M., Tebbe, C.C., Cagáň, L. (2018): The responses of soil nematode communities to Bt maize cultivation at four field sites across Europe. Soil Biol Biochem, 119: 194 – 202. DOI: 10.1016/j.soilbio.2018.01.023
  9. Čerevková, A., Renčo, M., Miklisová, D., Gömöryová, E. (2021): Soil nematode communities in managed and natural temperate forest. Diversity, 13: 327. DOI: 10.3390/d130703(27
  10. Clarke, K.R., Gorley, R.N. (2006): PRIMER v6: User Manual/Tutorial (Plymouth Routines in Multivariate Ecological Research). PRIMER-E, Plymouth.
  11. Cocozza di Montanara, A., Baldrighi, E., Franzo, A., Catani, L., Grassi, E., Sandulli, R., Semprucci, F. (2022): Nematodes research: state of the art, prospects, and future directions. A network analysis approach. Ecol Inform, 72: 101891. DOI: 10.1016/j.ecoinf.2022.101891
  12. Colin, S., Coelho, L.P., Sunagawa, S., Bowler, C., Karsenti, E., Bork, P., Pepperkok, R., de Vargas, C. (2017): Quantitative 3D-imaging for cell biology and ecology of environmental microbial eukaryotes. eLife, 6: e26066. DOI: 10.7554/eLife.26066
  13. Dionísio, J.A., Demetrio, W.C., Maceda, A. (2018): Earthworms and nematodes: The Ecological and Functional Interactions. In: Ray S. (Ed) Earthworms – The Ecological Engineers of Soil. London, UK: IntechOpen, pp. 17 – 32
  14. Du Preez, G., Daneel, M., De Goede, R., Du Toit, M. J., Ferris, H., Fourie, H., Geisen, S., Kakouli-Duarte, T., Korthals, G., Sánchez-Moreno, S., Schmidt, J.H. (2022): Nematode-based indices in soil ecology: Application, utility, and future directions. Soil Biol Biochem, 169: 108640. DOI: 10.1016/j.soilbio.2022.108640
  15. Justino, J.T., Demetrio, G.R., Neres, P.F., Meneses, D., Kramer Pinto, T. (2023): A functional perspective of nematode assemblages as proxy of quality in tropical estuarine tidal flats. Mar Environ Res, 186: 105922. DOI: 10.1016/j.marenvres.2023.105922
  16. Ferris, H., Bongers, T., (2009): Indices developed specifically for analysis of nematode assemblages. In: Wilson, M.J., Kakouli-Duarte, T. (Eds) Nematodes as environmental indicators. Wallingford: CABI, pp. 124 – 145
  17. Ferris, H., Bongers, T., De Goede, R.G.M. (2001): A framework for soil food web diagnostics: extension of the nematode faunal analysis concept. Appl Soil Ecol, 18(1): 13 – 29. DOI: 10.1016/S0929-1393(01)00152-4
  18. Gaugler, R., Bilgrami, A.L. (2004): Nematode Behaviour. Wallingford: CABI, 419 pp.
  19. Manachini, B.R.I., Lozzia, G.C. (2002): First investigations into the effects of Bt corn crop on Nematofauna. Boll Zool Agrar Bachic, 34(1): 85 – 96
  20. Neher, D.A., Muthumbi, A.W., Dively, G.P. (2014): Impact of coleopteran-active Bt corn on non-target nematode communities in soil and decomposing corn roots. Soil Biol Biochem, 76: 127 – 135. DOI: 10.1016/j.soilbio.2014.05.019
  21. Pires, D., Orlando, V., Collett, R.L., Moreira, D., Costa, S.R., Inácio, M.L. (2023): Linking Nematode Communities and Soil Health under Climate Change. Sustainability, 15(15): 11747. DOI: 10.3390/su151511747
  22. Platt, H.M. (1981): Pictorial taxonomic keys: their construction and use for the identification of freeliving marine nematodes. Cah Biol Mar, 25: 83 – 91
  23. Schratzberger, M., Warr, K., Rogers, S.I. (2007): Functional diversity of nematode communities in the southwestern North Sea. Mar Environ Res, 63(4): 368 – 389. DOI: 10.1016/j.marenvres.2006.10.006
  24. Semprucci, F., Grassi, E., Balsamo, M. (2022): Simple Is the Best: An Alternative Method for the Analysis of Free-Living Nematode Assemblage Structure. Water, 14(7): 1114. DOI: 10.3390/w14071114
  25. Shabrina, N.H., Lika, R.A., Indarti, S. (2023): Deep learning models for automatic identification of plant-parasitic nematode. Artif Intell Agric, 7: 1 – 12. DOI: 10.1016/j.aiia.2022.12.002
  26. Thevenoux, R., Van Linh, L.E., Villessèche, H., Buisson, A., Beurton-Aimar, M., Grenier, E., Folcher, L., Nicolas, P. (2021): Image based species identification of Globodera quarantine nematodes using computer vision and deep learning. Comput Electron Agric, 186: 106058. DOI: 10.1016/j.compag.2021.106058
  27. Thiele, T.R., Faumont, S., Lockery, S.R. (2009): The neural network for chemotaxis to tastants in Caenorhabditis elegans is specialized for temporal differentiation. J Neurosci, 29(38): 11904 – 11911. DOI: 10.1523/JNEUROSCI.0594-09.2009
  28. Thistle, D., Lambshead, P.J.D., Sherman, K.M. (1995): Nematode tail-shape groups respond to environmental differences in the deep sea. Vie et Milieu / Life & Environment, 45(2): 107 – 115
  29. Usman, Y., Muhammad, A.M. Chiroman, A. (2016): Roles of soil biota and biodiversity in soil environment – A concise communication. Eurasian J Soil Sci, 5(4): 255 – 265. DOI: 10.18393/EJSS.2016.4.255–265
  30. Van Den Hoogen, J., Geisen, S., Routh, D., Ferris, H., Traunspurger, W., Wardle, D.A., de Goede, R.G.M., Adams, B.J., Ahmad, W., Andriuzzi, W.S., et al. (2019): Soil nematode abundance and functional group composition at a global scale. Nature, 572: 194 – 198. DOI: 10.1038/s41586-019-1418-6
  31. Violle, A., Navas, M.L., Vile, D., Kazakou, E., Fortunel, C., Hummel, I., Garnier, E. (2007): Let the concept of trait be functional! Oikos, 116(5): 882 – 892. DOI: 10.1111/j.0030-1299.2007.15559.x
  32. Wieser, W. (1953): Reports of the Lund University Chile expedition 1948 – 1949: 10. Free-living marine nematodes. I. Enoploidea. Acta. Univ. lund. NF, 49(6): 1 – 155
  33. Zhao, J., Neher, D.A. (2014): Soil energy pathways of different ecosystems using nematode trophic group analysis: a meta-analysis. Nematology, 16(4): 379 – 385. DOI: 10.1163/15685411-00002771
  34. Zullini, A., Semprucci, F. (2020): Morphological differences between free-living soil and freshwater nematodes in relation to their environments. Nematology, 22(2): 125 – 132. DOI: 10.1163/15685411-00003330
  35. Zullini, A. (2021): Nematodi dácqua dolce – Manuale di identificazione al genere e metodi di raccolta [Freshwater nematodes / Manual for identification of nematode genera and sampling methods]. Biol Ambient, 35 (2021 – 2° suppl), 250 pp. DOI: 10.30463/ao211.009 (In Italian)
DOI: https://doi.org/10.2478/helm-2024-0001 | Journal eISSN: 1336-9083 | Journal ISSN: 0440-6605
Language: English
Page range: 85 - 98
Submitted on: Jul 24, 2023
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Accepted on: Dec 8, 2023
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Published on: Apr 23, 2024
In partnership with: Paradigm Publishing Services
Publication frequency: Volume open

© 2024 F. Semprucci, L. Catani, E. Grassi, M. Jakubcsiková, A. Čerevková, published by Slovak Academy of Sciences, Institute of Parasitology
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.