References
- Abbaraju NV, Cai Y, Rees BB (2011) Protein recovery and identification from the gulf killifish, Fundulus grandis: comparing snap-frozen and RNAlater® preserved tissues. Proteomics11: 4257–4261
- Almoguera C, Personat JM, Prieto-Dapena P, Jordano J (2015) Heat shock transcription factors involved in seed desiccation tolerance and longevity retard vegetative senescence in transgenic tobacco. Planta242: 461–475
- Botling J, Edlund K, Segersten U, Tahmasebpoor S, Engström M, Sundström M, Malmström PU, Micke P (2009) Impact of thawing on RNA integrity and gene expression analysis in fresh frozen tissue. Diagnostic Molecular Pathology18: 44–52
- Cha J-Y, Ahn G, Kim JY, Kang SB, Kim MR, Su'udi M, Kim W-Y, Son D (2013) Structural and functional differences of cytosolic 90-kDa heat-shock proteins (Hsp90s) in Arabidopsis thaliana. Plant Physiology and Biochemistry70: 368–373
- Cheng J, Cheng X, Wang L, He Y, An C, Wang Z, Zhang H (2015) Physiological characteristics of seed reserve utilization during the early seedling growth in rice. Brazilian Journal of Botany38: 751–759
- Choudhary MK, Nomura Y, Shi H, Nakagami H, Somers DE (2016) Circadian profiling of the Arabidopsis proteome using 2D-DIGE. Frontiers in Plant Science7: 1007
- D'Alessandro S, Golin S, Hardtke CS, Lo Schiavo F, Zottini M (2015) The co-chaperone p23 controls root development through the modulation of auxin distribution in the Arabidopsis root meristem. Journal of Experimental Botany66: 5113–5122
- Dantán-González E, Rosenstein Y, Quinto C, Sánchez F (2001) Actin monoubiquitylation is induced in plants in response to pathogens and symbionts. Molecular Plant-Microbe Interactions14: 1267–1273
- Dunaeva M, Adamska I (2001) Identification of genes expressed in response to light stress in leaves of Arabidopsis thaliana using RNA differential display. European Journal of Biochemistry268: 5521–5529
- Dunmire V, Wu C, Symmans WF, Zhang W (2002) Increased yield of total RNA from fine-needle aspirates for use in expression microarray analysis. BioTechniques33: 890–896
- Fajardy I, Moitrot E, Vambergue A, Vandersippe-Millot M, Deruelle P, Rousseaux J (2009) Time course analysis of RNA stability in human placenta. BioMed Central (BMC) Molecular Biology10: 21
- Fengler S, Spirer I, Neef M, Ecke M, Nieselt K, Hampp R (2015) A whole-genome microarray study of Arabidopsis thaliana semisolid callus cultures exposed to microgravity and nonmicrogravity related spaceflight conditions for 5 days on board of Shenzhou 8. BioMed Research International547495
- Ferl RJ, Koh J, Denison F, Paul A-L (2015) Spaceflight induces specific alterations in the proteomes of Arabidopsis. Astrobiology15: 32–56
- Ferl RJ, Zupanska A, Spinale A, Reed D, Manning-Roach S, Guerra G, Cox DR, Paul A-L (2011) The performance of KSC Fixation Tubes with RNALater for orbital experiments: a case study in ISS operations for molecular biology. Advances in Space Research48: 199–206
- Garcia L, Welchen E, Gey U, Arce AL, Steinebrunner I, Gonzalez DH (2016) The cytochrome c oxidase biogenesis factor AtCOX17 modulates stress responses in Arabidopsis. Plant Cell and Environment39: 628–644
- Gilliland LU, Pawloski LC, Kandasamy MK, Meagher RB (2003) Arabidopsis actin gene ACT7 plays an essential role in germination and root growth. Plant Journal33: 319–328
- González-Verdejo CI, Die JV, Nadal S, Jiménez-Marín A, Moreno MT, Román B (2008) Selection of housekeeping genes for normalization by real-time RT-PCR: analysis of Or-MYB1 gene expression in Orobanche ramosa development. Analytical Biochemistry379: 176–181
- Grotzer MA, Patti R, Geoerger B, Eggert A, Chou TT, Phillips PC (2000) Biological stability of RNA isolated from RNAlater-treated brain tumor and neuroblastoma xenografts. Medical and Pediatric Oncology34: 438–442
- Gupta V, Holets-Bondar L, Roby KF, Enders G, Tash JS (2015) A tissue retrieval and postharvest processing regimen for rodent reproductive tissues compatible with long-term storage on the International Space Station (ISS) and post-flight biospecimen sharing program. BioMed Research International475935
- Jiang SY, Chi YH, Wang JZ, Zhou JX, Cheng YS, Zhang BL, Ma A, Vanitha J, Ramachandran S (2015) Sucrose metabolism gene families and their biological functions. Scientific Reports5: 17583
- Kittang A-I, Kvaløy B, Winge P, Iversen T-H (2010) Ground testing of Arabidopsis preservation protocol for the microarray analysis to be used in the International Space Station (ISS) European Modular Cultivation System (EMCS) Multigen-2 experiment. Advances in Space Research46: 1249–1256
- Kwon T, Sparks JA, Nakashima J, Allen SN, Tang Y, Blancaflor EB (2015) Transcriptional response of Arabidopsis seedlings during spaceflight reveals peroxidase and cell wall remodeling genes associated with root hair development. American Journal of Botany102: 21–35
- Lafarga V, Cuadrado A, Lopez de Silanes I, Bengoechea R, Fernandez-Capetillo O, Nebreda AR (2009) p38 mitogen-activated protein kinase- and HuR-dependent stabilization of p21(Cip1) mRNA mediates the G(1)/S checkpoint. Molecular and Cellular Biology29: 4341–4351
- Liu A, Chen S, Wang M, Wang Z, Zheng C, Zhao P, Guo D, Ahammed GJ (2015) Silencing of mitochondrial uncoupling protein gene aggravates chilling stress by altering mitochondrial respiration and electron transport in tomato. Acta Physiologiae Plantarum37: 223
- Mehdi Khanlou K, Van Bockstaele E (2012) A critique of widely used normalization software tools and an alternative method to identify reliable reference genes in red clover (Trifolium pratense L.). Planta236: 1381–1393
- Millar KD, Johnson CM, Edelmann RE, Kiss JZ (2011) An endogenous growth pattern of roots is revealed in seedlings grown in microgravity. Astrobiology11: 787–797
- Ndimba B, Rafudeen S, Gehring C, Meyer Z, Simon W, Chivasa S, Slabas A (2005) Proteomic identification of an hsp70.1 protein induced in Arabidopsis cells following hyperosmotic stress trea®ents. South African Journal of Science101: 449–453
- Nsubuga AM, Robbins MM, Roeder AD, Morin PA, Boesch C, Vigilant L (2004) Factors affecting the amount of genomic DNA extracted from ape faeces and the identification of an improved sample storage method. Molecular Ecology13: 2089–2094
- Ohama N, Kusakabe K, Mizoi J, Zhao H, Kidokoro S, Koizumi S, Takahashi F, Ishida T, Yanagisawa S, Shinozaki K, Yamaguchi-Shinozaki K (2016) The transcriptional cascade in the heat stress response of Arabidopsis is strictly regulated at the level of transcription factor expression. Plant Cell28: 181–201
- Páska C, Bögi K, Szilák L, Tokés A, Szabó E, Sziller I, Rigó Jr J, Sobel G, Szabó I, Kaposi-Novák P, Kiss A, Schaff Z (2004) Effect of formalin, acetone, and RNAlater fixatives on tissue preservation and different size amplicons by real-time PCR from paraffin-embedded tissue. Diagnostic Molecular Pathology13: 234–240
- Paul A-L, Levine HG, McLamb W, Norwood KL, Reed D, Stutte GW, Wells HW, Ferl RJ (2005b) Plant molecular biology in the space station era: utilization of KSC fixation tubes with RNAlater. Acta Astronautica56: 623–628
- Paul A-L, Popp MP, Gurley WB, Guy C, Norwood KL, Ferl RJ (2005a) Arabidopsis gene expression patterns are altered during spaceflight. Advances in Space Research36: 1175–1181
- Pfaffl MW (2001) A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Research29: e45
- Pietsch J, Ma X, Wehland M, Aleshcheva G, Schwarzwälder A, Segerer J, Birlem M, Horn A, Bauer J, Infanger M, Grimm D (2013) Spheroid formation of human thyroid cancer cells in an automated culturing system during the Shenzhou-8 space mission. Biomaterials34: 7694–7705
- Riesgo A, Pérez-Porro AR, Carmona S, Leys SP, Giribet G (2012) Optimization of preservation and storage time of sponge tissues to obtain quality mRNA for next-generation sequencing. Molecular Ecology Resources12: 312–322
- Stoll B, Stoll K, Steinhilber J, Jonietz C, Binder S (2013) Mitochondrial transcript length polymorphisms are a widespread phenomenon in Arabidopsis thaliana. Plant Molecular Biology81: 221–233
- Sun YG, Wang B, Jin SH, Qu XX, Li YJ, Hou BK (2013) Ectopic expression of Arabidopsis hlycosyltransferase UGT85A5 enhances salt stress tolerance in tobacco. PLoS One8: e59924
- Wang SS, Sherman ME, Rader JS, Carreon J, Schiffman M, Baker CC (2006) Cervical tissue collection methods for RNA preservation: comparison of snap-frozen, ethanol-fixed, and RNAlater-fixation. Diagnostic Molecular Pathology15: 144–148
- Wang X, Yan B, Shi M, Zhou W, Zekria D, Wang HZ, Kai G (2016) Overexpression of a Brassica campestris HSP70 in tobacco confers enhanced tolerance to heat stress. Protoplasma253: 637–645
- Wang Z, Chen Y, Fang H, Shi H, Chen K, Zhang Z, Tan X (2014) Selection of reference genes for quantitative reverse-transcription polymerase chain reaction normalization in Brassica napus under various stress conditions. Molecular Genetics and Genomics289: 1023–1035
- Wu X, Brewer G (2012) The regulation of mRNA stability in mammalian cells: 2.0. Gene500: 10–21
- Xiao D, Zhang N-W, Zhao J-J, Bonnema G, Hou X-L (2012) Validation of reference genes for real-time quantitative PCR normalization in non-heading Chinese cabbage. Functional Plant Biology39: 342–350
- Zupanska AK, Denison FC, Ferl RJ, Paul A-L (2013) Spaceflight engages heat shock protein and other molecular chaperone genes in tissue culture cells of Arabidopsis thaliana. American Journal of Botany100: 235–248