Genetic diversity of the Carpathian capercaillie in space and time Cover

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Genetic diversity of the Carpathian capercaillie in space and time

Folia Forestalia Polonica

Volume 66 (2024): Issue 1 (March 2024)

By: Anna Santorek, Paweł Armatys, Barbara Pregler, Tomasz Zwijacz-Kozica, Zbigniew Żurek, Paweł Hotała, Wojciech Brozik and Robert Rutkowski

Open Access

|Mar 2024

Figures & Tables

Map of the distribution of the capercaillie in Poland, with particular emphasis on the Carpathian subpopulations covered by this study. The estimated number of individuals was based on data from the work of Zawadzka et al. (2019)

Results of analysis in STRUCTURE. In bar plots each individual is represented by a vertical bar partitioned into segments. The length of each segment describes the estimated membership proportions to each of the genetic clusters. Although ΔK suggested division into two clusters, the bar plot for K = 3 (corresponding to the number of geographical groups) was also presented. Abbreviations of groups (subpopulations) as in Table 1. A – results of analysis in STRUCTURE based on total (cumulative for both periods) number of unique genotypes in each subpopulation; B - results of analysis in STRUCTURE based on unique genotypes from both periods independently in 3 subpopulations; C – results of analysis in STRUCTURE based on unique genotypes identified independently for each period in each subpopulation

Results of DAPC analysis. DAPCs are shown for the first (x-axis) and the second (y-axis) discriminant function. Abbreviations of groups (subpopulations) as in Table 1. A – results of DAPC analysis based on unique genotypes in each subpopulation in each period; B – results of DAPC analysis based on unique genotypes identified in 2010–2013; C – results of DAPC analysis based on unique genotypes identified in 2021–2022

Information about the collected biological material and basic measures of genetic diversity, determined on the basis of polymorphism of 9 microsatellite loci_

	GOR		TAT		BAB		GORT	TATT	BABT	Total
	GOld	GNew	TOld	TNew	BOld	BNew	Both periods			Total
Ncol	346	156	221	179	204	200	520	400	404	1324
Nsuc	227	102	117	99	127	117	329	216	244	789
Nind	44	21	28	39	35	29	64	66	64	194
Na	3.89	3.78	5.56	5.22	4.78	5.33	4.33	5.67	5.78	6.55
R	3.77	3.78	5.55	4.91	4.66	5.05	3.73	5.14	4.76	–
Pa	0.111	0.111	1.111	0.444	0.333	0.333	0.111	0.565	0.565	–
Ho	0.593	0.608	0.671	0.641	0.578	0.617	0.598	0.653	0.595	0.616
He	0.583	0.591	0.669	0.629	0.616	0.660	0.590	0.653	0.649	0.654
HWE	0.009	0.052	0.445	0.068	0.132	0.303	<0.001	0.003	<0.001	<0.001
Fis	−0.007	−0.005	0.015	−0.006	0.077	0.083	−0.005	0.007	0.090	0.060*

Among-population genetic differentiation based on pairwise Fst sensu Weir and Cockerham [1984]_ All Fst values are significant after Bonferroni correction, except of values shown in dark grey_ Abbreviation of comparing groups of samples as in Table 1

	GOld	TNew	TOld	BNew	BOld
GNew	0.0013	0.0435	0.0557	0.0794	0.0843
GOld		0.0372	0.0515	0.0631	0.0672
TNew			0.0083	0.0415	0.0383
TOld				0.0258	0.0211
BNew					0.0229
		GORT	TATT
	TATT	0.0426
	BABT	0.0647	0.0251

DOI: https://doi.org/10.2478/ffp-2024-0005 | Journal eISSN: 2199-5907 | Journal ISSN: 0071-6677

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Language: English

Page range: 46 - 60

Submitted on: Oct 29, 2023

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Accepted on: Nov 30, 2023

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Published on: Mar 8, 2024

Published by: Forest Research Institute

In partnership with: Paradigm Publishing Services

Publication frequency: 4 issues per year

Keywords:

microsatellites,

non-invasive genetic sampling,

population structure,

the Carpathians

Related subjects:

Veterinary medicine

© 2024 Anna Santorek, Paweł Armatys, Barbara Pregler, Tomasz Zwijacz-Kozica, Zbigniew Żurek, Paweł Hotała, Wojciech Brozik, Robert Rutkowski, published by Forest Research Institute
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.

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