Have a personal or library account? Click to login
Principal component analysis for functional data on grain yield of winter wheat cultivars Cover

Principal component analysis for functional data on grain yield of winter wheat cultivars

Open Access
|Dec 2013

References

  1. Abramowitz M., Stegun I.A. (1965): Handbook of Mathematical Functions with Formulas, Graphs, and Mathematical Tables. Dover Publications.10.1063/1.3047921
  2. Allard R.W., Bradshaw A.D. (1964): Implications of genotype-environmental in­teractions in applied plant breeding. Crop Sci. 4: 503-508.10.2135/cropsci1964.0011183X000400050021x
  3. Anderson W.K. (2010): Closing the gap between actual and potential yield of rainfed wheat. The impacts of environment, management and cultivar. Field Crops Research 116: 14-22.10.1016/j.fcr.2009.11.016
  4. Annicchiarico P. (2002a): Defining adaptation strategies and yield stability tar­gets in breeding programmes. In: Kang M.S. (Ed.). Quantitative genetics, genomics and plant breeding. CABI, Wallingford, UK: 165-183.10.1079/9780851996011.0365
  5. Annicchiarico P. (2002b): Genotype-environment interactions: challenges and op­portunities for plant breeding and cultivar recommendations. FAO Plant Pro­duction and Protection Paper No. 174. Food and Agriculture Organization, Rome.
  6. Annicchiarico P., Bellah F., Chiari T. (2006a): Repeatable genotype-location in­teraction and its exploitation by conventional and GIS-based cultivar recom­mendation for durum wheat in Algeria. Eur. J. Agron. 24: 70-81.10.1016/j.eja.2005.05.003
  7. Annicchiarico P., Russi L., Piano E., Veronesi F. (2006b): Cultivar adaptation across Italian locations in four turfgrass species. Crop Sci. 46: 264-272.10.2135/cropsci2005.0047
  8. Annicchiarico P., Iannucci A. (2008): Adaptation strategy, germplasm type and adaptive traits for field pea improvement in Italy based on variety responses across climatically contrasting environments. Field Crops Res. 108: 133-142.10.1016/j.fcr.2008.04.004
  9. Annicchiarico P., Chiapparino E., Perenzin M. (2010): Response of common wheat varieties to organic and conventional production systems across Italian loca­tions, and implications for selection. Field Crops Res. 116: 230-238.10.1016/j.fcr.2009.12.012
  10. Basford K.E., Cooper M. (1998): Genotype x environment interactions and some considerations of their implications for wheat breeding in Australia. Austr. J. Agric. Res. 49: 153-174.
  11. Braun H.J., Rajaram S., van Ginkel M. (1996): CIMMYT’s approach to breeding for wide adaptation. Euphytica 92: 175-183. 10.1007/BF00022843
  12. de la Vega A.J., Chapman S.C. (2006): Defining sunflower selection strategies for a highly heterogeneous target population of environments. Crop Sci. 46: 136-144.10.2135/cropsci2005.0170
  13. Dencic S., Mladenov N., Kobiljski B. (2011): Effects of genotype and environment on breadmaking quality in wheat. Int. J. Plant Prod. 5: 71-82.
  14. Gauch H.G. (1992): Statistical analysis of regional yield trials. AMMI analysis of factorial designs. Elsevier Science, New York.
  15. Gauch H.G. (2006): Statistical analysis of yield trials by AMMI and GGE. Crop Sci. 46: 1488-1500.10.2135/cropsci2005.07-0193
  16. Gauch H.G., Piepho H.P., Annicchiarico P. (2008): Statistical analysis of yield trials by AMMI and GGE: Further considerations. Crop Sci. 48: 866-889.10.2135/cropsci2007.09.0513
  17. Gauch H.G., Zobel R.W. (1997): Identifying mega-environments and targeting genotypes. Crop Sci. 37: 311-326.10.2135/cropsci1997.0011183X003700020002x
  18. Ghaderi A., Adams M.W., Saettler A.W. (1982): Environmental response patterns in commercial classes of common bean (Phaseolus vulgaris L.). Theor. Appl. Genet. 63: 17-22.
  19. Górecki T., Krzysko M. (2012): A kernel version of functional principal compo­nents analysis, Statistics in Transition, 13(3): 559-568.
  20. Karonski M. (1973): On a definition of cluster and pseudocluster for multivariate normal populations. In: Proceedings of the 39th Session of the International Statistical Institute. Vienna: 523-528.
  21. Kozak M. (2010a): Use of parallel coordinate plots in multi-response selection of interesting genotypes. Commun. Biometry Crop Sci. 5: 83-95.
  22. Kozak M. (2010b): Comparison of three types of G x E performance plot for showing and interpreting genotypes’ stability and adaptability. Int. J. Plant Prod. 5: 71-82.
  23. Kruskal J.B. (1956): On the shortest spanning subtree of a graph and the traveling salesman problem. In: Proceedings of American Mathematical Society 7: 48­50.10.1090/S0002-9939-1956-0078686-7
  24. Lillemo M., van Ginkel M., Trethowan R.M., Hernandez E., Crossa J. (2005): Differential adaptation of CIMMYT bread wheat to global high temperature environments. Crop Sci. 45: 2443-2453.10.2135/cropsci2004.0663
  25. Prim R.C. (1957) Shortest connection networks and some generalizations. Bell System Technical Journal 36: 1389-1401.10.1002/j.1538-7305.1957.tb01515.x
  26. R Core Team (2013): R: A language and environment for statistical comput­ing. R Foundation for Statistical Computing, Vienna, Austria. http://www. <http://www.R-project.org>R-project.org <http://www.R-project.org>.
  27. Ramsay J.O., Wickham H., Graves S., Hooker G. (2012): fda: Functional Data Analysis. R package version 2.3.2. http://CRAN.R-project.org/package= <http://CRAN.R-project.org/package=fda>fda <http://CRAN.R-project.org/package=fda>.
  28. Ramsay J.O., Silverman B.W. (2005): Functional Data Analysis, Second Edition, Springer.10.1007/b98888
  29. Rane J., Pannu R.K., Sohu V.S., Saini R.S., Mishra B., Shoran J., Crossa J., Vargas M., Joshi A.K. (2007): Performance of yield and stability of advanced wheat genotypes under heat stress environments of the Indo-Gangetic Plains. Crop Sci. 47: 1561-1573.10.2135/cropsci2006.07.0479
  30. Rodriguez M., Rau D., Papa R., Attene G. (2008): Genotype by environment interactions in barley (Hordeum vulgare L.): different responses of lan- draces, recombinant inbred lines and varieties to Mediterranean environment. Euphytica 163: 231-247.10.1007/s10681-007-9635-8
  31. Singh R.P., Huerta-Espino J., Sharma R., Joshi A.K.,Trethowan R. (2007): High yielding spring bread wheat germplasm for global irrigated and rainfed pro­duction systems. Euphytica 157: 351-363.10.1007/s10681-006-9346-6
  32. Sivapalan S., O’Brien L., Ortiz-Ferrera G., Hollamby G.J., Barclay I., Martin P.J. (2000): An adaptation analysis of Australian and CIMMYT/ICARDA wheat germplasm in Australian production environments. Aust. J. Agric. Res. 51: 903-915.
  33. Trethowan R., Crossa J. (2007): Lessons learnt from forty years of international spring bread wheat trials. Euphytica 157: 385-390.10.1007/s10681-006-9330-1
  34. Trethowan R.M., van Ginkel M., Rajaram S. (2002): Progress in breeding wheat for yield and adaptation in global drought affected environments. Crop Sci. 42: 1441-1446.10.2135/cropsci2002.1441
  35. Ulukan H. 2008. Agronomic adaptation of some field crops: a general approach. J. Agron. Crop Sci. 194: 169-179.10.1111/j.1439-037X.2008.00306.x
  36. Yan W., Hunt L.A. (1998): Genotype by environment interaction and crop yield. Plant Breed. Rev. 16: 135-179.
  37. Yan W., Kang M.S., Ma B., Woods S., Cornelius P.L. (2007): GGE biplot vs. AMMI analysis of genotype-by-environment data. Crop Sci. 47: 643-655.10.2135/cropsci2006.06.0374
  38. Yang R.C., Crossa J., Cornelius P.L., Burgueno J. (2009): Biplot analysis of genotype x environment interaction: Proceed with caution. Crop Sci. 49: 1564-1576.10.2135/cropsci2008.11.0665
  39. Zhang Y., He Z., Zhang A., van Ginkel M., Ye G. (2006): Pattern analysis on grain yield of Chinese and CIMMYT spring wheat cultivars grown in China and CIMMYT. Euphytica 147: 409-420. 10.1007/s10681-005-9038-7
DOI: https://doi.org/10.2478/bile-2013-0019 | Journal eISSN: 2199-577X | Journal ISSN: 1896-3811
Language: English
Page range: 81 - 94
Published on: Dec 10, 2013
Published by: Polish Biometric Society
In partnership with: Paradigm Publishing Services
Publication frequency: 2 issues per year

© 2013 Mirosław Krzyśko, Adriana Derejko, Tomasz Górecki, Edward Gacek, published by Polish Biometric Society
This work is licensed under the Creative Commons License.

Volume 50 (2013): Issue 2 (December 2013)