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Linking Gut Microbiota and Irritable Bowel Syndrome (Ibs): A Review Cover

Linking Gut Microbiota and Irritable Bowel Syndrome (Ibs): A Review

Open Access
|Sep 2025

Figures & Tables

Differences in gut microbiota qualitative-quantitative composition in depending on subtype of irritable bowel syndrome_

SubtypeChanges in gut microbiotaRef.
increasedecrease
IBS-DEnterobacteriaceae, Proteobacteria, Firmicutes,Clostridiales, Bacteroides, Lactobacillus,Prevotella,Escherichia coli,Pseudomonas aeruginosa, DoreaActinobacteria, Bacteroidetes, Ruminococcaceae,Methanobacteriaceae, Parasuterella,Lactobacillus, Bifidobacterium, Prevotella,Enterococcus, Faecalibacterium, Lachnospira,Turicibacter, Weisella,Oxolobacter, Oceanobacillus,Collinsella aerofaciensCheng et al. 2024; Chong et al. 2019; Surdea-Blaga et al. 2024
IBS-CBacteroides,Clostridiales, Christensenellaceae,Veilonella,Akkermansia, Methanobrevibacter, Pseudomonas aeruginosa, Methanobrevibacter smithiiBacteroides, Methanobrevibacter,Bifidobacterium catenulatum,PrevotellaCheng et al. 2024; Chong et al. 2019; Surdea-Blaga et al. 2024
IBS-M-Faecalibacterium prausnitziiCheng et al. 2024
IBS-UPseudomonas aeruginosa-

Examples of gut microbiota phyla and taxa, along with an analysis of their role in the functioning of the human organism based on (Almonajjed et al_ 2025; Mamieva et al_ 2022)

PhylumTaxaRole
FirmicutesEnterococcus, Ruminococcus, Clostridium, Lactobacillus, Faecalibacterium, Roseburia, Eubacteriummetabolism of amino acids, carbohydrates and lipids, the transformation of BAs and the biosynthesis of cholesterol, the synthesis of vitamins (K2, B1, B2, B6, B7, B9 and B12) support the integrity of the intestinal epithelial barrier and protection against enteric infections
BacteroidetesBacteroides, Prevotellaimmunomodulation, appetite regulation
ActinobacteriaBifidobacterium, Corynebacteriumvitamin synthesis, BAs metabolism, protection against infections
ProteobacteriaShigella, Escherichia, Desulfovibrioamino-acids metabolism

Prebiotics, probiotics, synbiotics and postbiotics used in alleviating symptoms of irritable bowel syndrome

Biotics in prophilaxis or therapeutic approachPotential use for the prevention and treatmentTherapeutic activityRef.
ProbioticsBeneficial bacteria strains that can be administered orally as a dietary supplementThe reduction on gut inflammation, increase the level of beneficial bacteria (Lactobacillus spp., Bifidobacterium spp.), inhibition of growth of pathogenic bacteria, modulation of both anti- and pro-inflammatory cytokines, participation in production of SCFAs, production of neurotransmitters, improve symptoms in IBS (e.g. abdominal pain, bloating), tighten gut barrier, regulation of GBA, improve gut barrier integrity and mucus production, reduction of intestinal permeability, improve patient’s quality of life and mood, influence on the both innate and adaptive immunity, with interaction occurring with epithelial cells, dendritic cells, macrophages and lymphocytes through pattern-recognition receptors, helping regulate Tcell balance (especially boosting Treg. to reduce inflammation), prevention antibioticassociated diarrhea, necrotizing enterocolitis, pouchitis, and traveler’s diarrhea, in vitro and animal studies indicate improved burn wound healing with Saccharomyces cerevisiae, and prevention or reduction of eczema through mechanisms involving the GBACheng et al. 2024; Aggeletopoulou and Triantos 2024; Almonajjed et al. 2025; Shaikh et al. 2023; Martyniak et al. 2021; Luzzi et al. 2024; Qiao et al. 2025; Maftei et al. 2023; Campaniello et al. 2023; Rijkers et al. 2011; Ranjha et al. 2021; Fuochi and Furneri 2023
Prebiotics
  • Dietary fibers that are non-digestible food components by human enzymes and not absorbed by the human small intestine. They reach the colon where they are fermented by bacteria present in the GM

  • Present naturally in multitude of plant foods, including artichokes, asparagus, chicory, garlic, onions, wheat, and bananas

  • It can be synthesised and incorporated into food products

Promotion of growth of beneficial bacteria, improve symptoms in irritable bowel syndrome, production of SCFAs (including byturate, propionate and acetate), regulation of gut motility, improve intestinal barrier function, reduction of inflammatory processess, anti-oxidative activity, regulation of cholesterol and lipids synthesisAggeletopoulou and Triantos 2024; Almonajjed et al. 2025; Shaikh et al. 2023; Chong et al. 2019; Martyniak et al. 2021; Luzzi et al. 2024
Synbiotics
  • Products that contain both prebiotics and probiotics

  • It is possible to formulate such products in two different ways: the first approach, known as the complementary approach, the prebiotic and probiotic substances work independently; in the second approach, known as the synergistic approach, the prebiotic and probiotic substances work together

Improve probiotics survival in gastrointestinal tract, reduction of symptoms in IBS (bloating, abdominal pain), increase a bowel movement frequency, reduction of levels of pro-inflammatory cytokine (IL-8, TNF-α) and increase of levels of anti-inflammatory cytokines (IL-10), improve intestinal barrier integrity and gut motilityAlmonajjed et al. 2025; Shaikh et al. 2023; Chong et al. 2019; Martyniak et al. 2021; Luzzi et al. 2024
Postbiotics
  • Classified as either (a) products resulting from bacterial metabolism, or (b) synthetic products that possess the capability to modulate inflammation and the immune response

It is assumed that improve symptoms in IBS (particularly in IBS-D) and reduce inflammatory activityAlmonajjed et al. 2025; Martyniak et al. 2021
DOI: https://doi.org/10.2478/am-2025-0012 | Journal eISSN: 2545-3149 | Journal ISSN: 0079-4252
Language: English, Polish
Page range: 147 - 159
Submitted on: Apr 14, 2025
Accepted on: Aug 25, 2025
Published on: Sep 30, 2025
Published by: Polish Society of Microbiologists
In partnership with: Paradigm Publishing Services
Publication frequency: 4 times per year

© 2025 Michał Karasek, Michał Szyszko, Krzysztof Polański, Sylwia Andrzejczuk, Martyna Kasela, Urszula Kosikowska, published by Polish Society of Microbiologists
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.