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Pratylenchus smoliki, a new nematode species (Pratylenchidae: Tylenchomorpha) from the Great Plains region of North America Cover

Pratylenchus smoliki, a new nematode species (Pratylenchidae: Tylenchomorpha) from the Great Plains region of North America

Open Access
|Dec 2021

Figures & Tables

Figure 1:

Light microscope images of Pratylenchus smoliki n. sp. specimens. (A) NID 8139 female head, (B) NID 8139 female tail, (C) NID 8139 spermatheca, vulva and post-uterine sac, (D) NID 8170 female reproductive system, (E) NID 8170 female entire body, (F) NID 8137 male entire body, (G) NID 8154 spicules and bursa, (H) NID 8154 male head, (I) NID 8137 spicules and bursa, (J) NID 8154 midbody lateral lines in male.
Light microscope images of Pratylenchus smoliki n. sp. specimens. (A) NID 8139 female head, (B) NID 8139 female tail, (C) NID 8139 spermatheca, vulva and post-uterine sac, (D) NID 8170 female reproductive system, (E) NID 8170 female entire body, (F) NID 8137 male entire body, (G) NID 8154 spicules and bursa, (H) NID 8154 male head, (I) NID 8137 spicules and bursa, (J) NID 8154 midbody lateral lines in male.

Figure 2:

P. smoliki n. sp. SEM in en face view, different NID numbers specify different individual specimens. (A) NID 4808 Trapezoidal subdorsal and subventral lips adjoining oral disc with demarcation between sectors, six inner labial sensilla flank oral opening, (B) NID 4801 Lateral lip sectors clearly separated from oral disc and subventral/subdorsal sectors, (C) NID 4805 and (D) NID 4820 Anterior region profiles displaying two lip annuli.
P. smoliki n. sp. SEM in en face view, different NID numbers specify different individual specimens. (A) NID 4808 Trapezoidal subdorsal and subventral lips adjoining oral disc with demarcation between sectors, six inner labial sensilla flank oral opening, (B) NID 4801 Lateral lip sectors clearly separated from oral disc and subventral/subdorsal sectors, (C) NID 4805 and (D) NID 4820 Anterior region profiles displaying two lip annuli.

Figure 3:

P. smoliki n. sp. SEM of anterior region with beginning of lateral field, different NID numbers specify different individual specimens. (A) NID 4815, (B) NID 4812, (C) NID 4816, (D) NID 4817.
P. smoliki n. sp. SEM of anterior region with beginning of lateral field, different NID numbers specify different individual specimens. (A) NID 4815, (B) NID 4812, (C) NID 4816, (D) NID 4817.

Figure 4:

P. smoliki n. sp. SEM of midbody region, different NID numbers specify different individual specimens. (A) NID 4808 and (B) NID 4818 slightly protruding vulval lips, (C) NID 4807 and (D) NID 4803 lateral field with irregularly areolated lines at midbody.
P. smoliki n. sp. SEM of midbody region, different NID numbers specify different individual specimens. (A) NID 4808 and (B) NID 4818 slightly protruding vulval lips, (C) NID 4807 and (D) NID 4803 lateral field with irregularly areolated lines at midbody.

Figure 5:

SEM images of P. smoliki n. sp. tails, different NID numbers specify different individual specimens. A–I exhibit the variation in tail termini, J–L illustrate male tails. (A) NID 4803, (B) NID 4819, (C) NID 4813, (D) NID 4818, (E) NID 4805, (F) NID 4811, (G) NID 4809, (H) NID 4803, (I) NID 4805, (J) NID 4817, (K) NID 4816, (L) NID 4816.
SEM images of P. smoliki n. sp. tails, different NID numbers specify different individual specimens. A–I exhibit the variation in tail termini, J–L illustrate male tails. (A) NID 4803, (B) NID 4819, (C) NID 4813, (D) NID 4818, (E) NID 4805, (F) NID 4811, (G) NID 4809, (H) NID 4803, (I) NID 4805, (J) NID 4817, (K) NID 4816, (L) NID 4816.

Figure 6:

Light microscope images of Pratylenchus alleni specimens from the type locality Saline County, Illinois. (A–E) female NID 7381, (F–H) male NID 7382. (A) Entire body, (B) Head and anterior region, (C) Reproductive region, (D) Midbody lateral lines, (E) Tail, (F) Tail, bursa and spicules, (G) Head and anterior portion, (H) Entire body
Light microscope images of Pratylenchus alleni specimens from the type locality Saline County, Illinois. (A–E) female NID 7381, (F–H) male NID 7382. (A) Entire body, (B) Head and anterior region, (C) Reproductive region, (D) Midbody lateral lines, (E) Tail, (F) Tail, bursa and spicules, (G) Head and anterior portion, (H) Entire body

Figure 7:

A-C, COI DNA Maximum likelihood tree of 372 Pratylenchid sequences GTR + G 200, the tree is split into three sections, 7A, 7B, and 7C. Bootstrap values in red, brackets delimit species and haplotype groups.
A-C, COI DNA Maximum likelihood tree of 372 Pratylenchid sequences GTR + G 200, the tree is split into three sections, 7A, 7B, and 7C. Bootstrap values in red, brackets delimit species and haplotype groups.

Figure 8:

28S DNA Maximum likelihood tree of 41 Pratylenchid sequences K2P + G 500 Bootstrap values in red, brackets delimit species and haplotype groups.
28S DNA Maximum likelihood tree of 41 Pratylenchid sequences K2P + G 500 Bootstrap values in red, brackets delimit species and haplotype groups.

Figure S1:

Maximum likelihood tree of ITS1 sequences from P. smoliki n. sp. and closely related species. Bootstrap values in red.
Maximum likelihood tree of ITS1 sequences from P. smoliki n. sp. and closely related species. Bootstrap values in red.

Figure 9:

Box and whisker plots of the distribution of numbers of Pratylenchus smoliki n. sp. recovered from roots of six eight-week old corn hybrids. The lower bound of the box indicates the first quartile, the central line is the median, and the upper bound is the third quartile. The lower and upper whiskers represent minimum and maximum values. Outliers that are more than 1.5 times the interquartile range (third quartile minus first quartile) from the lower or upper quartile, respectively, are indicated with dots. The mean is indicated by the symbol “×”.
Box and whisker plots of the distribution of numbers of Pratylenchus smoliki n. sp. recovered from roots of six eight-week old corn hybrids. The lower bound of the box indicates the first quartile, the central line is the median, and the upper bound is the third quartile. The lower and upper whiskers represent minimum and maximum values. Outliers that are more than 1.5 times the interquartile range (third quartile minus first quartile) from the lower or upper quartile, respectively, are indicated with dots. The mean is indicated by the symbol “×”.

Figure 10:

Box and whisker plots of the distribution of numbers of Pratylenchus smoliki n. sp. recovered from roots of four eight-week old agronomic crop plants. The lower bound of the box indicates the first quartile, the central line is the median, and the upper bound is the third quartile. The lower and upper whiskers represent minimum and maximum values. Outliers that are more than 1.5 times the interquartile range (third quartile minus first quartile) from the lower or upper quartile, respectively, are indicated with dots. The mean is indicated by the symbol “×”.
Box and whisker plots of the distribution of numbers of Pratylenchus smoliki n. sp. recovered from roots of four eight-week old agronomic crop plants. The lower bound of the box indicates the first quartile, the central line is the median, and the upper bound is the third quartile. The lower and upper whiskers represent minimum and maximum values. Outliers that are more than 1.5 times the interquartile range (third quartile minus first quartile) from the lower or upper quartile, respectively, are indicated with dots. The mean is indicated by the symbol “×”.

Figure 11:

Box and whisker plots of the distribution of numbers of Pratylenchus smoliki n. sp. recovered from roots of 11 eight-week old cover crops. The lower bound of the box indicates the first quartile, the central line is the median, and the upper bound is the third quartile. The lower and upper whiskers represent minimum and maximum values. Outliers that are more than 1.5 times the interquartile range (third quartile minus first quartile) from the lower or upper quartile, respectively, are indicated with dots. The mean is indicated by the symbol “×”.
Box and whisker plots of the distribution of numbers of Pratylenchus smoliki n. sp. recovered from roots of 11 eight-week old cover crops. The lower bound of the box indicates the first quartile, the central line is the median, and the upper bound is the third quartile. The lower and upper whiskers represent minimum and maximum values. Outliers that are more than 1.5 times the interquartile range (third quartile minus first quartile) from the lower or upper quartile, respectively, are indicated with dots. The mean is indicated by the symbol “×”.

Pratylenchus specimens used for phylogenetic analysis in this study_

NID #SpeciesStageLocalityHostMarkerGenBank#
N3873 P. smoliki n. sp.MShawnee Co., KS* CornCOIMK878313
N3873 P. smoliki n. sp.MShawnee Co., KS* CornrDNA LSUOK490313
N3880 P. smoliki n. sp.MShawnee Co., KS* CornCOIMK878314
N3880 P. smoliki n. sp.MShawnee Co., KS* CornITS1OK490336
N8136 P. smoliki n. sp.MShawnee Co., KS* CornCOIMK878315
N8137 P. smoliki n. sp.FShawnee Co., KS* CornCOIMK878316
N8139 P. smoliki n. sp.FShawnee Co., KS* CornCOIMK878317
N8139 P. smoliki n. sp.FShawnee Co., KS* CornrDNA LSUOK490314
N8145 P. smoliki n. sp.FShawnee Co., KS* CornCOIMK878318
N8145 P. smoliki n. sp.FShawnee Co., KS* CornrDNA LSUOK490315
N8146 P. smoliki n. sp.FShawnee Co., KS* CornCOIMK878319
N8148 P. smoliki n. sp.FShawnee Co., KS* CornCOIMK878320
N8154 P. smoliki n. sp.FShawnee Co., KS* CornCOIMK878321
N8156 P. smoliki n. sp.FShawnee Co., KS* CornCOIMK878322
N8170 P. smoliki n. sp.FShawnee Co., KS* CornCOIMK878323
N8170 P. smoliki n. sp.FShawnee Co., KS* CornrDNA LSUOK490316
N9793 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489823
N9793 P. smoliki n. sp.FShawnee Co., KS* CornrDNA LSUOK490317
N9793 P. smoliki n. sp.FShawnee Co., KS* CornrDNA SSUOK490342
N9795 P. smoliki n. sp.MShawnee Co., KS* CornrDNA SSUOK490343
N9809 P. smoliki n. sp.FShawnee Co., KS* CornITS1OK490337
N10037 P. smoliki n. sp.FBuffalo Co., NECornCOIMK878324
N10039 P. smoliki n. sp.FBuffalo Co., NECornCOIMK878325
N10053 P. smoliki n. sp.FBuffalo Co., NECornCOIMK878326
N11506 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489824
N11506 P. smoliki n. sp.FShawnee Co., KS* CornrDNA LSUOK490318
N11507 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489825
N11508 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489826
N11509 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489827
N11509 P. smoliki n. sp.FShawnee Co., KS* CornrDNA LSUOK490319
N11510 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489828
N11592 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489829
N11593 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489830
N11593 P. smoliki n. sp.FShawnee Co., KS* CornrDNA LSUOK490320
N11594 P. smoliki n. sp.FShawnee Co., KS* CornrDNA SSUOK490344
N11595 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489831
N11595 P. smoliki n. sp.FShawnee Co., KS* CornrDNA LSUOK490321
N11600 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489832
N11602 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489833
N11603 P. smoliki n. sp.FShawnee Co., KS* CornrDNA LSUOK490322
N11605 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489834
N11607 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489835
N11612 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489836
N11613 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489837
N11614 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489838
N11614 P. smoliki n. sp.FShawnee Co., KS* CornrDNA LSUOK490323
N11618 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489839
N12448 P. smoliki n. sp.MShawnee Co., KS* CornCOIOK489840
N12451 P. smoliki n. sp.MShawnee Co., KS* CornCOIOK489841
N12451 P. smoliki n. sp.MShawnee Co., KS* CornCOIOK489842
N12453 P. smoliki n. sp.MShawnee Co., KS* CornCOIOK489843
N12453 P. smoliki n. sp.MShawnee Co., KS* CornrDNA LSUOK490324
N12454 P. smoliki n. sp.MShawnee Co., KS* CornITS1OK490338
N12457 P. smoliki n. sp.MShawnee Co., KS* CornCOIOK489844
N12458 P. smoliki n. sp.MShawnee Co., KS* CornCOIOK489845
N12459 P. smoliki n. sp.MShawnee Co., KS* CornCOIOK489846
N12463 P. smoliki n. sp.MShawnee Co., KS* CornCOIOK489847
N12463 P. smoliki n. sp.MShawnee Co., KS* CornrDNA LSUOK490325
N12464 P. smoliki n. sp.MShawnee Co., KS* CornCOIOK489848
N12465 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489849
N12466 P. smoliki n. sp.MShawnee Co., KS* CornCOIOK489850
N12467 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489851
N12468 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489852
N12469 P. smoliki n. sp.MShawnee Co., KS* CornCOIOK489853
N12470 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489854
N12470 P. smoliki n. sp.FShawnee Co., KS* CornrDNA LSUOK490326
N12471 P. smoliki n. sp.FShawnee Co., KS* CornCOIOK489855
N3717 P. alleni MMadison Co., NECornCOIMK877458
N3717 P. alleni MMadison Co., NECornrDNA LSUOK490293
N7381 P. alleni FSaline Co., IL** SoybeanCOIMK877459
N7382 P. alleni MSaline Co., IL** SoybeanCOIMK877460
N10848 P. alleni JSaline Co., IL** SoybeanrDNA LSUOK490294
N10850 P. alleni FSaline Co., IL** SoybeanCOIMK877461
N10850 P. alleni FSaline Co., IL** SoybeanrDNA LSUOK490295
N8539 P. crenatus FCounty Galway, IREPasturerDNA LSUOK490296
N9774 P. crenatus JRwanda-COIOK489810
N6350 P. dakotaensis FAtchison Co., KSCornrDNA LSUOK490297
N6351 P. dakotaensis JAtchison Co., KSCornrDNA LSUOK490298
N6438 P. hexincisus FGraham Co., KSCornrDNA LSUOK490299
N7726 P. hexincisus FBig Horn Co., WYDrybeanrDNA LSUOK490300
N10849 P. hexincisus JSaline Co., ILSoybeanrDNA LSUOK490301
N10756 P. neglectus FSeward Co., KSCornrDNA LSUOK490302
N11481 P. neglectus FGallatin Co., MTCornCOIOK489811
N11483 P. neglectus FGallatin Co., MTCornCOIOK489812
N11485 P. neglectus FBroadwater Co., MTCornCOIOK489813
N11487 P. neglectus FBroadwater Co., MTCornCOIOK489814
N11489 P. neglectus FBroadwater Co., MTCornCOIOK489815
N11491 P. neglectus FTreasure Co., MTCornCOIOK489816
N11499 P. neglectus FYellowstone Co., MTCornCOIOK489817
N6260 P. penetrans MFairbanks Co., AKPeonyrDNA LSUOK490303
N6261 P. penetrans JFairbanks Co., AKPeonyrDNA LSUOK490304
N7091 P. penetrans FFairbanks Co., AKPeonyrDNA LSUOK490305
N11414 P. penetrans FBritish Columbia, CAN Prunus sp.COIOK489818
N11415 P. penetrans FBritish Columbia, CAN Prunus sp.COIOK489819
N11416 P. penetrans FBritish Columbia, CAN Prunus sp.COIOK489820
N11417 P. penetrans FBritish Columbia, CAN Prunus sp.COIOK489821
N11424 P. penetrans FBritish Columbia, CAN Prunus sp.COIOK489822
N6383 P. scribneri FMarshall Co., KSCornrDNA LSUOK490306
N7833 P. scribneri JCuster Co., NECornrDNA LSUOK490307
N7839 P. scribneri JCuster Co., NECornrDNA LSUOK490308
N7845 P. scribneri FCuster Co., NECornrDNA LSUOK490309
N10274 P. scribneri FKearney Co., NECornrDNA LSUOK490310
N10301 P. scribneri FPhelps Co., NECornrDNA LSUOK490311
N10306 P. scribneri FPhelps Co., NECornrDNA LSUOK490312
P130021 P. scribneri -Maryland-ITS1OK490333
P156024 P. scribneri FFlorida-ITS1OK490334
P344041 P. scribneri ---ITS1OK490335
N7566 P. thornei FTreasure Co., MTCornrDNA LSUOK490327
N7567 P. thornei FTreasure Co., MTCornrDNA LSUOK490328
N11495 P. thornei FYellowstone Co., MTCornCOIOK489856
N11497 P. thornei FYellowstone Co., MTCornCOIOK489857
N11422 P. vulnus FBritish Columbia, CAN Prunus sp.COIOK489858
N10764 Pratylenchus sp.FSumner Co., KSCornrDNA LSUOK490329
N12456 Pratylenchus sp.MShawnee Co., KSCornCOIOK489859
N10685 Pratylenchus sp.FSeward Co., KSCornrDNA LSUOK490330
N8930 Pratylenchus sp.FLincoln Co., ARSoybeanrDNA LSUOK490331
N10841 Pratylenchus sp.JCross Co., ARSoybeanrDNA LSUOK490332
P156016 Pratylenchus sp.FLancaster Co., NELeadplantITS1OK490339
P156019 Pratylenchus sp.FGage Co., NEBig BluestemITS1OK490340
P201006 Pratylenchus sp.-Idaho-ITS1OK490341
N84 Nacobbus aberrans MXalatlaco, MEX-COIOK489860
N85 Nacobbus aberrans MXalatlaco, MEX-COIOK489861
N194 Nacobbus aberrans JSioux Co., NESugarbeetCOIOK489862
N452 Nacobbus aberrans -Zacatecas, MEXDrybeanCOIOK489863
N537 Nacobbus aberrans JChacra, ARGTomatoCOIOK489864
N658 Nacobbus aberrans JLisandro Olmos, ARG-COIOK489865

Estimates of evolutionary divergence (p-distances) over sequence pairs within (bold) and between groups_

N. aberransP. alleniP. crenatusP. hexicisusP. neglectusP. penetransP. scribneriP. sp. 3P. sp ClayP. dakotaensisP. smoliki n. sp.P. sp. 9 & 10P. sp. 7P. sp. 5P. thorneiP. vulnusP. zeae
Nacobbus aberrans0.105
P. alleni0.3280.003
P. crenatus0.3580.3160.001
P. hexincisus0.4160.2170.360.029
P. neglectus0.3140.30.360.3810.02
P. penetrans0.3250.3230.320.3790.310.032
P. scribneri0.360.1720.320.1980.3290.3340.007
P. sp. 30.3650.1810.3560.230.3390.3480.1870.004
P._sp_Clay0.3730.1880.3290.1960.3290.3390.1120.1910
P. dakotaensis0.3350.2160.3060.2860.3220.3070.2420.2280.2470.078
P. smoliki n. sp.0.4120.2190.3810.210.3770.3620.2270.190.2210.2980.101
P. sp. 9 & 100.3780.2040.3360.230.3550.350.210.2260.2050.2540.2290.105
P. sp. 70.3510.1710.3030.2150.3110.3210.1420.1880.150.2120.2350.2120.091
P. sp. 50.380.1950.3330.1790.3580.3490.1270.20.0790.260.2060.2040.1610
P. thornei0.3110.340.3720.3860.2980.3110.3550.3520.3480.320.3730.3490.3280.3660.002
P. vulnus0.3350.2410.3210.30.3330.3050.2650.2870.2760.2410.3190.2590.2460.2970.3160.051
P. zeae0.3260.3260.3460.3980.3150.3310.3520.3320.340.3140.3940.360.3310.360.3170.3270.012
P. horti0.3310.260.3310.2960.3170.310.2430.230.2440.2170.3080.2460.2280.2770.2950.2540.299
P. fallax0.2790.3020.2920.3590.2780.1530.3110.3320.3210.2710.390.3420.2970.3460.2720.2960.309
P. pseudocoffeae0.3260.180.3390.220.3260.3260.1930.1810.1730.2430.2290.2220.1840.1970.3450.2770.331
P. coffeae0.3140.2310.280.3020.3240.2930.2290.2490.2370.2240.2910.240.2240.2570.3040.2440.303
P. hippeastri0.3070.2340.3180.30.3250.3070.2470.2460.2550.2010.2780.2560.2280.2670.3260.2460.317
P. loosi0.3010.2230.3110.3020.2810.3020.2420.2360.2460.2150.3010.2480.2350.2630.2980.2710.296
P. convallariae0.3150.3370.3160.3850.3160.1670.3290.3490.3330.2910.3890.3460.3080.3510.310.3050.323
P. sp0.3240.2220.2870.2840.3090.3090.2280.2420.2540.2040.2880.2420.2270.2520.320.250.296
P. speijeri0.3060.2350.290.2740.3070.3120.2160.2530.2330.1980.30.2360.2240.2480.3050.2310.306
P. capsici0.2990.3130.3290.3650.2960.1940.3120.3190.3170.2770.3680.3420.3060.3390.2960.30.326
P. brachyurus0.3160.3230.3390.3960.310.2330.3410.3410.3660.2960.3880.3710.3280.3690.2830.3170.328
P. flakkensis0.3170.3420.3770.3920.3520.3050.3560.3490.3430.3240.3840.3540.3360.3710.2920.3350.332
P. parazeae0.3860.3680.3940.3980.3660.3850.3680.3550.3680.3530.3980.3880.3590.3740.3460.3590.264
P. hortiP. fallaxP. pseudocoffeaeP. coffeaeP. hippeastriP. loosiP. convallariaeP. sp. C1P. speijeriP. capsiciP. brachyurusP. flakkensisP. parazeae
P. horti0.001
P. fallax0.2920.007
P. pseudocoffeae0.2480.3250
P. coffeae0.2290.2910.2520.008
P. hippeastri0.2240.3040.2560.1850.023
P. loosi0.2210.3050.2490.1930.2090.026
P. convallariae0.3050.1450.3310.2790.2970.3060.021
P. sp. C10.2380.2980.270.1430.1970.1930.2960.018
P. speijeri0.2150.2940.2410.1180.1640.1810.2830.1090.005
P. capsici0.2760.1690.3340.2950.2780.2840.1870.2920.280.006
P. brachyurus0.3080.2020.3560.3080.3160.2960.2290.2980.2790.2110.014
P. flakkensis0.3140.2920.3560.2990.2910.2920.3370.3350.3330.2890.3150.04
P. parazeae0.3520.3770.3890.3610.3730.370.3890.3530.3570.3570.3530.3560.049

Measurements of P_ smoliki n_ sp_ specimens_

Holotype N Females N Males N Juveniles
L49122511.4 + 50.6 (407-604)25456.8 + 32.7 (415-560)4320.5 + 38.1 (289-385)
a21.02224.4 + 3.0 (18.8-31.9)2527.1 + 1.7 (23.8-31.7)420.5 + 2.3 (18.0-24.1)
b5.4215.6 + 0.4 (4.8-6.6)255.3 + 0.4 (4.4-5.9)43.7 + 0.5 (3.3-4.5)
b′4.2224.3 + 0.4 (3.5-4.9)254.1 + 0.3 (3.6-4.6)43.0 + 0.3 (2.5-3.4)
c19.52222.1 + 2.8 (17.7-31.5)2522.6 + 3.9 (16.7-34.1)417.7 + 2.2 (15.7-21.5)
c′1.9221.9 + 0.2 (1.6-2.2)241.6 + 0.2 (1.2-2.2)41.8 + 0.1 (1.7-1.9)
V %79.42279.2 + 1.4 (76.8-82.0)
Lip annules2222.0 + 0 (2-2)252.0 + 0 (2-2)42.0 + 0 (2-2)
St162215.1 + 0.6 (14-16)2514.2 + 0.6 (13-15)412.7 + 0.6 (12-14)
M %502248.3 + 1.6 (44.9-51.7)2547.7 + 2.9 (43.1-54.7)444.9 + 2.5 (41.9-48.7)
DGO3222.7 + 0.3 (2-3)252.9 + 0.1 (3-3)42.3 + 0.1 (2-3)
O %17.32217.7 + 1.9 (12.7-20.3)2520.0 + 1.2 (18.3-23.0)418.3 + 1.3 (16.5-20.0)
MB %45.12244.1 + 2.5 (39.4-51.7)2544.6 + 2.6 (39.8-50.1)442.0 + 3.2 (39.2-47.1)
Overlap 2229.1 + 6.5 (16-41)2526.2 + 6.4 (14-39)419.4 + 8.3 (7-27)
Body ann W1.6221.4 + 0.2 (1.0-2.0)241.3 + 0.1 (1.0-1.5)41.2 + 0.1 (1.0-1.3)
LFL4 244.0 + 0.0 (4-4)
PUS/Bw0.6220.9 + 0.2 (1-1)
PUS/V-A %16.12222.5 + 6.4 (13.5-32.8)
Sthc L/W 221.1 + 0.1 (0.9-1.4)
T % 2544.1 + 4.8 (35.0-55.0)
Spicule 2516.8 + 0.8 (15-19)
Gubernaculum 244.3 + 0.6 (3-6)
Bursa: % tail 2596.5 + 9.2 (80.5-136.5)
Tail252223.4 + 2.8 (17-29)2520.7 + 3.2 (13-28)418.2 + 0.4 (18-19)
T/VA0.3220.3 + 0.0 (0.2-0.4)
Ran212219.7 + 3.0 (14-26)618.6 + 3.0 (15-24)418.0 + 1.2 (16-19)

Primers_

MarkerPrimer setAmplicon Size (kb)Primer Sequence (5′→ 3′)DirectionReference
COIa PsmoF40.425′-ATY GCS CCC GCC TTT GG-3’ForwardThis manuscript
COIJB5 5′-AGC ACC TAA ACT TAA AAC ATA ATG AAA ATG-3′Reverse Derycke et al. (2005)
COIJB30.435′-TTTTTTGGGCATCCTGAGGTTTAT-3′Forward Bowles et al., (1992)
COIJB5 5′-AGCACCTAAACTTAAAACATAATGAAAATG-3′Reverse Derycke et al. (2005)
COIF1KF0.955′- CCTACTATGATTGGTGGTTTTGGTAATTG-3′Forward Kanzaki & Futai (2002)
COIJB5 5′-AGCACCTAAACTTAAAACATAATGAAAATG-3′Reverse Derycke et al. (2005)
COIF7bPrat0.785′-GGDTGRACWTTHTAYCCNCC-3′Forward Ozbayrak et al. (2019)
COIJB5 5′-AGCACCTAAACTTAAAACATAATGAAAATG-3′Reverse Derycke et al. (2005)
ITS1b rDNA20.625′-TTGATTACGTCCCTGCCCTTT-3′Forward Vrain et al. (1992)
ITS1rDNA1.58Sa 5′-ACGAGCCGAGTGATCCACC-3′Reverse Cherry et al. (1997)
rDNA LSUc D2A0.755′-ACAAGTACCGTGAGGGAAAGTTG-3′Forward De Ley et al. (1999)
rDNA LSUD3B 5′-TCGGAAGGAACCAGCTACTA-3Reverse De Ley et al. (1999)
rDNA LSU28s-PratF30.485′-TTTGCAAGTGGAGTGCGT-3′ForwardThis manuscript
rDNA LSU28s-PratR1 5′-AATAGTTCACCATCTTTCGGG -3′ReverseThis manuscript
DOI: https://doi.org/10.21307/jofnem-2021-100 | Journal eISSN: 2640-396X | Journal ISSN: 0022-300X
Language: English
Page range: 1 - 23
Submitted on: Jun 17, 2021
Published on: Dec 10, 2021
Published by: Society of Nematologists, Inc.
In partnership with: Paradigm Publishing Services
Publication frequency: 1 issue per year

© 2021 Thomas Powers, Timothy Todd, Tim Harris, Rebecca Higgins, Ann MacGuidwin, Peter Mullin, Mehmet Ozbayrak, Kirsten Powers, Kanan Sakai, published by Society of Nematologists, Inc.
This work is licensed under the Creative Commons Attribution 4.0 License.