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Molecular and ultrastructure characterization of two nematodes (Thelandros scleratus and Physalopteroides dactyluris) based on ribosomal and mitochondrial DNA sequences

Open Access
|Apr 2016

References

  1. Bae, C.H., Szalanski, A.L., Robbins, R.T. (2008): Molecular Analysis of the Lance Nematode, Hoplolaimus spp., Using the First Internal Transcribed Spacer and the D1 - D3 Expansion Segments of 28S Ribosomal DNA. J. Nematol.. 40: 201 - 209
  2. Baylis, H.A. (1930): A third species of the nematode genus Thubunaea. Ann. mag. nat. hist.. 5: 246 - 249. DOI: 10.1080/00222933008673128
  3. Baylis, H.A. (1936): Nematoda. I. Ascaridoidea and Strongyloidea. The Fauna of British India including Ceylon and Burma. London, UK, Taylor and Francis, 408 pp.
  4. Bhadury, P., Austen, M.C. (2010): Barcoding marine nematodes: unimproved set of nematode 18S rRNA primers to overcome eukaryotic co-interference. Hydrobiologia. 641: 245 - 251. DOI: 10.1007/s 10750-009-0088-z
  5. Blouin, M.S. (2002): Molecular prospecting for cryptic species of nematodes: mitochondrial DNA versus internal transcribed spacer. Int. J. Parasitol.. 32: 527 - 531. DOI: 10.1016/s0020-7519(01)00357-5
  6. Blouin, M.S., Yowell, C.A., Courtney, C.H., Dame, J.B. (1997): Haemonchus placei and Haemonchus contortus are distinct species based on mtDNAevidence. Int. J. Parasitol.. 27:1383 – 1387. DOI: 10.1016/s0020-7519(97)00125-2
  7. Bursey, C.R., Goldberg, S.R. (2005): Two new species of Pharyn-godonidae (Nematoda: Oxyuroidea) and other nematodes in Ag-ama caudospina (Squamata: Agamidae) from Kenya, Africa. J. Parasitol.. 91: 591-599
  8. Chabaud, A.G., Brygoo, E.R. (1960): Nématodes parasites de caméléons malgaches. Memoires de I’’ Institut Scientifique de Madagascar, Séries A. 14:125 - 159
  9. Chatterji, R.C. (1933): On a new nematode, Parapharyngodon maplestoni gen. nov. sp. nov. from a Burmese lizards. Ann. Trop. Med. Parasitol.. 27:131-134
  10. Chaudhary, A., Kansal, G., Singh, N., Singh, H.S. (2014): New molecular data for parasites Hammerschmidtiella indicus and Thelandros scleratus (Nematoda: Oxyurida) to infer phylogenetic position. Turk. J. Zool.. 38. DOI: 10.3906/zoo-1311-18
  11. Denver, D.R., Morris, K., Lynch, M., Vassilieva, L., Thomas, W.K. (2000): High direct estimate of the mutation rate in the mitochondrial genome of Caenorhabditis elegans. Science. 289: 2342-2344. DOI: 10.1126/science.289.5488.2342
  12. Deshmukh, P.G. (1969): Physalopteroides versicoloris n. sp. from garden lizard Calotes versicolor. Riv. Parassitol.. 30:125-128
  13. Floyd, R.M., Rogers, A.D., Lambshead, P.J.D., Smith, C.R. (2005): Nematode specific PCR primers for the 18S small subunit rRNA gene. Mol. Ecol. Notes. 5: 611 - 612. DOI: 10.1111/j. 1471-8286.2005.01009.x
  14. Folmer, O., Black, M., Hoeh, W., Lutz, R., Vrijenhoek, R. (1994): DNA primers for amplification of mitochondrial cytochrome c oxi-dase subunit I from diverse metazoan invertebrates. Mol. Marine Biol. Biotechnol.. 3: 294 - 299
  15. Gasser, R.B. (2001): Identification of parasitic nematodes and study of genetic variability using PCR approaches. In: KENEDDY, M.W., HARNETT, W. (Eds) Parasitic nematodes: Molecular biology, biochemistry and immunology. London, UK: CAB International, pp. 53-82
  16. Hebert, P.D.N., Ratnasingham, S., Dewaard, J.R. (2003): Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc. R. Soc. Lond. B. 270: S96 - S99. DOI: 10.1098/rsbl.2003.0025
  17. Hoberg, E.P., Monsen, K.J., Kutz, S., Blouin, M.S. (1999): Structure, biodiversity and historical biogeography of nematode faunas in holarctic ruminants: morphological and molecular diagnoses for Teladorsagia boreoarcticus sp. n. (Nematoda: Ostertagiinae), a dimorphic cryptic species in muskoxen (Ovibos moschatus). J. Parasitol.. 85: 910-934. DOI: 10.2307/3285831
  18. Jones, R., Brown, D.S., Harris, E., Jones, J., Symondson, W.O.C., Bruford, M.W., Cable, J. (2012): First record of Neoxysomatium brevicaudatum through the non-native invasive sampling of Anguis fragilis complementary morphological and molecular detection. J. Helminthol.. 86: 125 - 129. DOI: 10.1017/s0022149x11000174
  19. Karve, J.N. (1938): Some nematode parasites of lizards. Libro Ju-bilar Travassos, Rió de Janeiro. 251 - 258
  20. Keddie, E.M., Higazi, T., Unnasch, T.R. (1998): The mitochondrial genome of Onchocerca volvulus sequence, structure, and phy-logenetic analysis. Mol. Biochem. Parasitol.. 95: 111 - 127. DOI: 10.1016/s0166-6851(98)00102-9
  21. Khera, S. (1951): Thubunaea quadridentata n. sp. (subfamily Phy-salopterinae Railliet, 1893: Family Physalopteridae Leiper, 1908: Nematoda) from wall lizard, Hemidactylus flaviviridis. Indian J. Helminthol.. 3:111 - 116
  22. Kumari, S., Chaudhary, A., Malti, Singh, H.S. (2011): Further observation of Thelandros scleratus Travassos, 1923 based on 28s rDNA. J. Nematode Morphol. System.. 14: 63 - 66
  23. Kumazawa, Y., Nishida, M. (1993): Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics. J. Mol. Evol.. 37: 380-398. DOI: 10.1007/bf00178868
  24. Lavrov, D.V., Brown, W.M. (2001): Trichinella spiralis mtDNA: a nematode mitochondrial genome that encodes a putative ATP8 and normally structured tRNAs and has gene arrangement relat-able to those of coelomate metazoans. Genetics. 157: 621 - 637
  25. Liu, G.H., Shao, R., Li, J.Y., Zhou, D.H., Li, H., Zhu, X.Q. (2013): The complete mitochondrial genomes of three parasitic nematodes of birds: a unique gene order and insights into nematode phylogeny. BMC Genomics. 14: 414.DOI: 10.1186/1471-2164-14-414
  26. MaŠOvÁ, S., BaruŠ, V., HodovÁ, I., MatĚJusovÁ, I., Koubek, P. (2008): Morphometric and molecular characterization of Parapharyngo-don echinatus (Nematoda, Pharyngodonidae) from the Senegal gecko (Tarentola parvicarinata). Acta Parasitol.. 53: 274 - 283. DOI: DOI: 10.2478/s 11686-008-0039-2
  27. Milne, I., Lindner, D., Bayer, M., Husmeier, D., Mcguire, G., Marshall, D.F., Wright, F. (2009): TOPALi v2: a rich graphical interface for evolutionary analyses of multiple alignments on HPC clusters and multi-core desktops. Bioinformatics. 25: 126 - 127. DOI: 10.1093/bioinformatics/btn575
  28. Pekmezci, G.Z. (2014): Occurrence ofAnisakis simplex sensu stric-to in imported Atlantic mackerel (Scomber scombrus) represents a risk for Turkish consumers. Int. J. Food Microbiol.. 185: 64 - 68. DOI: 10.1016/j.ijfoodmicro.2014.05.018
  29. Perera, A., Maia, J.P.M.C., Jorge, F., Harris, D.J. (2013): Molecular screening of nematodes in lacertid lizards from the Iberian Peninsula and Balearic Islands using 18S rRNA sequences. J. Helminthol.. 87: 189-194. DOI: 10.1017/s0022149x12000181
  30. Prosser, S.W.J., Velarde-Aguilar, M.G., LeÓLeÓN-RÈGagnon, V., Hebert, P.D.N. (2013). Advancing nematode barcoding: a primer cocktail for the cytochrome c oxidase subunit I gene from vertebrate parasitic nematodes. Mol. Ecol. Resour.. 13:1108 - 1115
  31. Railliet, A. (1893): Traité de zool. Méd. Et agricole. 2nd ed, (fasc. 1). Paris, 736 pp.
  32. Ramallo, G., Bursey, C.R., Goldberg, S.R. (2002). Parapharyngo-don riojensis n. sp. (Nematoda: Pharyngodonidae) from the lizard Phymaturus punae (Squamata: Iguania: Liolaemidae) from Northwestern Argentina. J. Parasitol.. 88: 979-982
  33. Singh, N., Chaudhary, A., Singh, H.S. (2013): Identification of two species of Binema Travassos, 1925 (Oxyurida: Travassosinematidae) based on morphological and sequence analysis of genomic (18S) and mitochondrial (Cox1) gene markers. J. Nematode Morphol. System.. 16: 173-180
  34. Tamura, K., Stecher, G., Peterson, D., Filipski, A., Kumar, S. (2013): MEGA6: Molecular Evolutionary Genetics Analysis version 6.0. Mol. Biol. Evol.. 30: 2725-9. DOI: 10.1093/molbev/mst197
  35. Thompson, J.D., Higgins, D.G., Gibson, T.J. (1994): Clustal W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res.. 22: 4673 - 4680. DOI: 10.1093/nar/22.22.4673
  36. Travassos, L. (1923): Informações sobre a fauna helminthologica de Mato Grosso. Folha Med.. 4: 29 – 30
  37. Van Megen, H., Van Den Elsen, S., Holterman, M., Karssen, G., Mooyman, P., Bongers, T., Holovachov, O., Bakker, J., Helder, J. (2009): A phylogenetic tree of nematodes based on about 1200 full-length small subunit ribosomal DNA sequences. Nematology. WEDL, K. (1861/62): Zur Helminthenfauna Egyptens. Sitzungs beri-11: 927-950. DOI: 10.1163/156854109x456862
  38. Vicente, J.J., Rodrigues, H.O., Gomes, D.C., Pinto, R.M. (1993). Nematóides do Brasil. Parte III: Nematóides de répteis. Rev. Bras. Zool., 10: 19 – 168
  39. Wedl, K. (1861/62): Zur Helminthenfauna Egyptens. Sitzungs beri-chte Mathematisch Naturwissenschaftliche Akademie der Wissen-schaften, 44: 463 – 482 (In German).
  40. Wu, H.W., Liu, C.K. (1940): Helminthological notes, II (Chinese summary). Sinensia, 11: 397 – 406
DOI: https://doi.org/10.1515/helmin-2016-0013 | Journal eISSN: 1336-9083 | Journal ISSN: 0440-6605
Language: English
Page range: 165 - 171
Submitted on: Feb 24, 2015
Accepted on: Oct 14, 2015
Published on: Apr 22, 2016
Published by: Slovak Academy of Sciences, Mathematical Institute
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year

© 2016 U Goswami, A Chaudhary, C Verma, H.S. Singh, published by Slovak Academy of Sciences, Mathematical Institute
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.