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Characterization of Microbial Communities in Acidified, Sulfur Containing Soils Cover

References

  1. Blagodatskaya E. and Y. Kuzyakov. 2013. Active microorganisms in soil: Critical review of estimation criteria and approaches. Soil Biol. Biochem. 67: 192–211.10.1016/j.soilbio.2013.08.024
  2. Cui P., F. Fan Ch. Yin, Z. Li, A. Song, Y. Wan and Y. Liang. 2013. Urea- and nitrapyrin-affected N2O emission is coupled mainly with ammonia oxidizing bacteria growth in microcosms of three typical Chinese arable soils. Soil Biol. Biochem. 66: 214–221.10.1016/j.soilbio.2013.08.001
  3. van Elsas J.D., R. Costa, J. Jansson, S. Sjöling, M. Bailey, R. Nalin, T.M. Vogel and L. van Overbeek. 2008. The metagenomics of disease-suppressive soils – experiences from the METACONTROL project. Trends Biotechnol, 26: 591–601.
  4. Ettema C.H. and D.A. Wardle. 2002. Spatial soil ecology. Trends Ecol. Evol. 17: 177–183.10.1016/S0169-5347(02)02496-5
  5. Fierer N. and R.B. Jackson. 2006. The diversity and biogeography of soil bacterial communities. Proc. Natl. Acad. Sci USA 103: 626–631.10.1073/pnas.0507535103133465016407148
  6. Gąsiewicz A., M. Jasionowski and A. Poberzhskyy. 2012. Influence of sulphur exploitation on features of geochemical surface on Polish-Ukraine border (in Polish). Biuletyn Panstowego Instytutu Geologicznego 449: 5–40.
  7. González, V., I. García, F. del Moral, S. de Haro, J.A. Sánchez and M. Simón. 2011. Impact of unconfined sulphur-mine waste on a semi-arid environment (Almería, SE Spain). J. Environ. Manage. 92: 1509–1519.10.1016/j.jenvman.2011.01.00121277075
  8. Kang C.-H. Soo Ji Oh, Y.J. Shin, S.-H. Han, I.-H. Nam and J.-S. So. 2015. Bioremediation of lead by ureolytic bacteria isolated from soil at abandoned metal mines in South Korea. Ecological Engineering, 74: 402–407.
  9. Krzywy-Gawrońska E. 2012. Enzymatic activity of urease and dehydrogenase in soil fertilized with GWDA compost with or without a PRPSOL addition. Pol. J. Environ. Stud. 21: 949–955.
  10. Kumar S., S. Chaudhuri and S.K. Maiti. 2013. Soil dehydrogenase enzyme activity in natural and mine Soil – A Review. Middle-East J. Sci. Res. 13: 898–906.
  11. Li X.D., H. Masuda, M. Kusakabe, F. Yanagisawa and H.-A. Zeng. 2006. Degradation of groundwater quality due to anthropogenic sulfur and nitrogen contamination in the Sichuan Basin, China. Geochemical Journal, 40: 309–332.
  12. Martyn W., T. Wyłupek, J. Onuch-Amborska and M. Jońca. 2004. The effects of sulphur mining on the soil in the area of the former sulphur mine Basznia near Lubaczow (Poland). Annales UMCS Sectio E, 59: 1407–1414.
  13. Mols M. and T. Abee. 2008. Role of ureolytic activity in Bacillus cereus nitrogen metabolism and acid survival. Appl. Environ. Microbiol. 74: 2370–2378.10.1128/AEM.02737-07229315218296540
  14. Muyzer G., E.C. de Waal. and A G. Uitterlinden. 1993. Profiling of complex microbial populations by denaturing gradient gel electrophoresis analysis of polymerase chain reaction-amplified genes coding for 16S rRNA. Appl. Environ. Microbiol. 59: 695–700.10.1128/aem.59.3.695-700.19932021767683183
  15. Ranjard L., F. Poly, and J. Combrisson. 2000. Heterogeneous cell density and genetic structure of bacterial pools associated with various soil microenvironments as determined by enumeration and DNA fingerprinting approach (RISA). Microb. Ecol. 39: 263–272.
  16. Rousk, J., E. Bååth, P.C. Brookes, C.L. Lauber, C. Lozupone, J.G. Caporaso, R. Knight and N. Fierer. 2010. Soil bacterial and fungal communities across a pH gradient in an arable soil. ISME J. 4: 1340–1351.10.1038/ismej.2010.5820445636
  17. Rousk J., P.C. Brookes and E. Bååth. 2009. Contrasting soil pH effects on fungal and bacterial growth suggest functional redundancy in carbon mineralization. Appl. Environ. Microbiol. 75: 1589–1596.10.1128/AEM.02775-08265547519151179
  18. Schwieger F. and C.C. Tebbe. 1998. A new approach to utilize PCR-single-strand-conformation polymorphism for 16S rRNA genebased microbial community analysis. Appl. Environ. Microbiol. 64: 4870–4876.10.1128/AEM.64.12.4870-4876.1998909369835576
  19. Shirakawa M.A., K.K. Kaminishikawahara, V.M. John, H. Kahn and M.M. Futai. 2011. Sand bioconsolidation through the precipitation of calcium carbonate by two ureolytic bacteria. Mater. Lett. 65: 1730–1733.10.1016/j.matlet.2011.02.032
  20. Sołek-Podwika K. and K. Ciarkowska. 2012. Properties of soils from the places where sulphur was stored. Soil Science Annual. 63: 46–48.10.2478/v10239-012-0024-1
  21. Tsai Y.L. and B.H. Olson. 1991. Rapid method for direct extraction of DNA from soil and sediments. Appl. Environ. Microbiol. 57: 1070–1074.10.1128/aem.57.4.1070-1074.19911828471647749
  22. Wang T., H. Sun, Ch. Jiang, , H. Mao and Y. Zhang. 2014. Immobilization of Cd in soil and changes of soil microbial community by bioaugmentation of UV-mutated Bacillus subtilis 38 assisted by biostimulation. Eur. J. Soil Biol. 65: 62–69.10.1016/j.ejsobi.2014.10.001
  23. Valenzuela L., A. Chi, S. Beard, A. Orell, N. Guiliani, J. Shabanowitz, D.F. Hunt and C.A. Jerez. 2006. Genomics, metagenomics and proteomics in biomining microorganisms. Biotechnol. Adv. 24: 197–211.
  24. Zieliński A. and G. Wałek. 2012. Changes in georafical enviroments in Grzybow region (Niecka Nidzianska) in 1900–2000 based on topopographical maps (in Polish). 19: 103–109.
  25. Xu M., X. Li, X. Cai , J. Gai X. Li, P. Christie and J. Zhang. 2014. Soil microbial community structure and activity along a montane elevational gradient on the Tibetan Plateau. Eur. J. Soil Biol. 64: 6–14.10.1016/j.ejsobi.2014.06.002
DOI: https://doi.org/10.5604/pjm-2017-509 | Journal eISSN: 2544-4646 | Journal ISSN: 1733-1331
Language: English
Page range: 509 - 517
Submitted on: Mar 3, 2017
Accepted on: Jun 13, 2017
Published on: Dec 4, 2017
Published by: Polish Society of Microbiologists
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year

© 2017 GRZEGORZ CZERWONKA, IWONA KONIECZNA, PAULINA ŻARNOWIEC, ARTUR ZIELIŃSKI, AGNIESZKA MALINOWSKA-GNIEWOSZ, AGNIESZKA GAŁUSZKA, ZDZISŁAW MIGASZEWSKI, WIESŁAW KACA, published by Polish Society of Microbiologists
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.

Volume 66 (2017): Issue 4 (December 2017)