Figure 1

Studied single nucleotide polymorphisms (SNPs) of CYP2C9 and VKORC1
| Gene symbol and variants | dbSNP rs No. | MAF in Asians* | Remarks |
|---|---|---|---|
| CYP2C9 | |||
| CYP2C9*2 (c.430 C>T, p.Arg144Cys) | rs1799853 | EAS 0.00 | Variants detected in Indian-Malaysians [11] |
| SAS 0.03 | |||
| CYP2C9*3 (c.1075 A>C, p.Ile359Leu) | rs1057910 | EAS 0.03 | |
| SAS 0.11 | |||
| VKORC1 | |||
| –1639G>A | rs9923231 | EAS 0.88 | |
| SAS 0.15 | |||
| 1173C>T | rs9934438 | EAS 0.88 | Complete linkage disequilibrium with |
| SAS 0.15 | rs9923231 in a recent study from Bangkok [8] |
Association between genetic polymorphisms and other factors and warfarin dose
| Number (cases) | Average warfarin dose (mg/week) | P | |
|---|---|---|---|
| All | 154 | 31 | – |
| Sex | 0.46 | ||
| Male | 59 (38.3%) | 31.9 | |
| Female | 95 (61.7%) | 30.4 | |
| Age | < 0.01 | ||
| <45 years | 81 (52.6%) | 35 | |
| ≥45 years | 73 (47.4%) | 26.5 | |
| Body mass index | 0.31 | ||
| <23.4 kg/m2 | 90 (58.4%) | 30.2 | |
| ≥23.4 kg/m2 | 64 (41.6%) | 32.2 | |
| Body surface area | 0.02 | ||
| <1.7 m2 | 103 (66.8%) | 29.4 | |
| ≥1.7 m2 | 51 (33.1%) | 34.3 | |
| Uric acid food consumption | 0.74 | ||
| Never/seldom | 144 (93.5%) | 30.9 | |
| Usually | 10 (6.5%) | 32.3 | |
| Green vegetable food consumption | 0.77 | ||
| Never/seldom | 57 (37.3%) | 31.5 | |
| Usually | 96 (62.7%) | 30.9 | |
| Medication used | 0.01* (List-1) | ||
| None | 102 (66.2%) | 32.7 | |
| List-1 | 50 (32.5%) | 27.6 | |
| List-2 | 2 (1.3%) | 29.8 | |
| rs9923231 (VKORC1) | <0.01** | ||
| AA | 74 (48.1%) | 23.8 | |
| AG | 64 (41.6%) | 35.3 | |
| GG | 16 (10.4%) | 47.3 | |
| rs1057910 (CYP2C9) | <0.01 | ||
| AA (*1*1) | 144 (93.5%) | 31.7 | |
| AC (*1*3) | 10 (6.5%) | 20.7 |
Median (95% confidence interval) of maintenance warfarin dose (mg/week) according to combined genotypes of CYP2C9 and VKORC1
| VKORC1 | CYP2C9*1*1 | CYP2C9*1*3 |
|---|---|---|
| AA | 21.8 (21.0-24.5) | 15.8 (7.0-24.5) |
| AG | 35.0 (31.6-39.9) | 24.0 (14.7-32.5) |
| GG | 49.0 (35.0-56.0) | (no observation) |