References
-
Claerbout
J
REPRODUCIBLE COMPUTATIONAL RESEARCH: A history of hurdles, mostly overcome
Available at:
http://sepwww.stanford.edu/data/media/public/sep/jon/reproducible.html [Last accessed 21 April 2014]. - Fomel S Claerbout J F Guest Editors’ Introduction: Reproducible Research Computing in Science and Engineering 2009 11 1 5 7 10.1109/MCSE.2009.14
-
Buckheit
J B
Donoho
D L
Wavelab and reproducible research 1995 Springer - Donoho D L Maleki A Rahman I U Shahram M Stodden V Reproducible Research in Computational Harmonic Analysis Computing in Science and Engineering 2009 11 1 8 18 10.1109/MCSE.2009.15
- Robert G Reproducible Research: A Bioinformatics Case Study Statistical Applications in Genetics and Molecular Biology 2005 4 1 1 25
- Peng R D Reproducible Research In Computational Science Science 2011 334 6060 1226 1227 10.1126/science.1213847
- LeVeque R J Python Tools for Reproducible Research on Hyperbolic Problems Computing in Science and Engineering 2009 11 1 19 27 10.1109/MCSE.2009.13
- Stodden V The Legal Framework for Reproducible Scientific Research: Licensing and Copyright Computing in Science and Engineering 2009 11 1 35 40 10.1109/MCSE.2009.19
-
Flemisch
B
Online Survey: Reproducibility in Computational Science and
Engineering
2013
Available at:
SIAM-CSE@siam.org -
Choi
S C T
Ding
Y
Hickernell
F J
Jiang
L
Zhang
Y
GAIL: Guaranteed Automatic Integration Library (Version 1.3)
MATLAB Software
2014
Available at:
http://code.google.com/p/gail/ -
Choi
S C T
Ding
Y
Hickernell
F J
Jiang
L
Zhang
Y
GAIL: Guaranteed Automatic Integration Library (Version 1.0)
MATLAB Software
2013
Available at:
http://code.google.com/p/gail/ - Clancy N Ding Y Hamilton C Hickernell F J Zhang Y The Cost of Deterministic, Adaptive, Automatic Algorithms: Cones, Not Balls Journal of Complexity 2014 30 1 21 45 10.1016/j.jco.2013.09.002
-
Hickernell
F J
Jiang
L
Liu
Y
Owen
A B
Guaranteed Conservative Fixed Width Confidence Intervals via Monte Carlo
Sampling
2014
Available at:
http://arxiv.org/abs/1208.4318 -
Choi
S C T
Munson
T S
OSCEF 1.1 APIs
2014
Available at:
http://code.google.com/p/oscef/ -
Choi
S C T
Munson
T S
OSCEF (Open-Source CIM-EARTH Framework) Version 1.1
2014
Available at:
http://code.google.com/p/oscef/ - Elliott J Foster I Judd K Moyer E Munson T CIM-EARTH: Community Integrated Model of Economic and Resource Trajectories for Humankind 2010 Argonne, Illinois Argonne National Laboratory. ANL/MCS-TM-307
- Choi S C T Munson T S OSCEF: The Open-Source CIM-EARTH Framework User Manual for Version 1.0 2013 IL Computation Institute, University of Chicago. ANL/MCS-TM-339
- Choi S C T A Complementarity Approach to Solving Computable General Equilibrium Models Computational Economics 2014 (in review)
- Choi S C T Iterative Methods for Singular Linear Equations and Least-Squares Problems 2006 ICME, Stanford University
- Choi S C T Paige C C Saunders M A MINRES-QLP: A Krylov subspace method for indefinite or singular symmetric systems SIAM Journal on Scientific Computing 2011 33 4 1810 1836 10.1137/100787921
- Choi S C T Saunders M A Algorithm 937: MINRES-QLP for symmetric and Hermitian linear equations and least-squares problems ACM Transactions on Mathematical Software 2014 40 2
- Choi S C T Minimal Residual Methods for Complex Symmetric, Skew Symmetric, and Skew Hermitian Systems 2013 Chicago, IL CI, University of Chicago. ANL/MCS-P3028–0812
- Choi S C T Generalized Minimal Residual Methods for Singular Linear Systems or Linear Least-Squares Problems 2014 (working)
-
MINRES-QLP
MINRES-QLP Project and Community Website
2013
Available at:
http://code.google.com/p/minres-qlp/ -
PETSc: Portable, Extensible Toolkit for Scientific Computation
Available at:
http://www.mcs.anl.gov/petsc/ [Last accessed 21 April 2014]. -
Claerbout
J
Karrenbach
M
Electronic Documents Give Reproducible Research a New Meaning
1992
Available at:
http://sepwww.stanford.edu/doku.php?id=sep:research:reproducible:seg92 - Chen S S Donoho D L Saunders M A Atomic decomposition by basis pursuit SIAM Journal on Scientific Computing 1998 20 1 33 61 10.1137/S1064827596304010
- Starck J L Candès E J Donoho D L The curvelet transform for image denoising Image Processing, IEEE Transactions on 2002 11 6 670 684
-
Choi
S C T
Hickernell
F J
IIT MATH-573 Reliable Mathematical Software [Seminal Course]
2013
Available at:
http://mypages.iit.edu/~schoi32/MATH573Slides.pdf -
MATLAB Unit Testing Framework
2013
Available at:
http://www.mathworks.com/help/ -
Doctest
2010
Available at:
http://www.mathworks.com/matlabcentral/ -
Purdue Online Writing Lab
2013
Available at:
http://owl.english.purdue.edu/owl/resource/560/10/ -
ACM Algorithms Policy
Available at:
http://toms.acm.org/AlgPolicy.html [Last accessed 21 April 2014]. -
NSF 13–525
Software Infrastructure for Sustained Innovation - SSE and SSI
2013
Available at:
http://www.nsf.gov/pubs/2013/nsf13525/nsf13525.htm -
Workshop on Sustainable Software for Science: Practice and Experiences
2013
Available at:
http://wssspe.researchcomputing.org.uk/ - Katz D S Choi S C T Lapp H Maheshwari K Löffler F Turk M Summary of the First Workshop on Sustainable Software for Science: Practice and Experiences (WSSSPE1) Journal of Open Research Software 2014 2 1 e6 10.5334/jors.an
-
Choi
S C
Donoho
D L
Flesia
A G
Huo
X
Levi
O
Shi
D
About BeamLab—a Toolbox for New Multiscale Methodologies
2002
Available at:
http://www-stat.stanford.edu/~beamlab/
