Figure 1
BoolSi output showing an attractor of a 30-node network (model of cambium regulation from [14], used in Section Case study). The activity coefficient of the node CK associated with each of roughly 0.0115 · 230 ≈ 12,348,031 network states sk leading to this attractor is .
Figure 2
Cambium regulation network from [14]. Bigger, green-colored nodes represent hormonal signals produced outside cambium; their states do not change throughout each simulation run. Dashed and solid lines represent activation and inhibition respectively.
Figure 3
BoolSi output showing the results of attractor analysis. Cell in i-th row and j-th column shows ρij, Spearman’s correlation coefficient between activity of the nodes i and j in the attractors. In the lower-right triangle, the values corresponding to p-values ≥ 0.05 are hidden.