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BayesTwin: An R Package for Bayesian Inference of Item-Level Twin Data Cover

BayesTwin: An R Package for Bayesian Inference of Item-Level Twin Data

By: Inga Schwabe  
Open Access
|Nov 2017

Abstract

BayesTwin is an open-source R package that serves as a pipeline to the MCMC program JAGS to perform Bayesian inference on genetically-informative hierarchical twin data. Simultaneously to the biometric model, an item response theory (IRT) measurement model is estimated, allowing analysis of the raw phenotypic (item-level) data. The integration of such a measurement model is important since earlier research has shown that an analysis based on an aggregated measure (e.g., a sum-score based analysis) can lead to an underestimation of heritability and the spurious finding of genotype-environment interactions. The package includes all common biometric and IRT models as well as functions that help plot relevant information or determine whether the analysis was performed well.

 

Funding statement: Partly funded by the PROO grant 411-12-623 from the Netherlands Organisation for Scientific Research (NWO).

DOI: https://doi.org/10.5334/jors.185 | Journal eISSN: 2049-9647
Language: English
Submitted on: Jul 11, 2017
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Accepted on: Oct 9, 2017
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Published on: Nov 14, 2017
Published by: Ubiquity Press
In partnership with: Paradigm Publishing Services
Publication frequency: 1 issue per year

© 2017 Inga Schwabe, published by Ubiquity Press
This work is licensed under the Creative Commons Attribution 4.0 License.