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Data Science in a Pandemic Cover
Open Access
|Oct 2023

Figures & Tables

Table 1

COVID-19 public data sources.

SOURCEURL
Johns Hopkins University2018 Novel Coronavirus COVID-19 (2019-nCoV) Data Repository by Johns Hopkins CSSE
World Health Organizationhttps://covid19.who.int/
European Centre for Disease Prevention and Controlhttps://www.ecdc.europa.eu/en/geographical-distribution-2019-ncov-cases
European Centre for Disease Prevention and Controlhttps://www.ecdc.europa.eu/en/publications-data/download-todavs-data-geographic-distribution-covid-19-cases-worldwide
The Covid Tracking Projecthttps://covidtracking.com/
U. S. Centers for Disease Control and Prevention (CDC)https://www.cdc.gov/coronavirus/2019-ncov/covid-data/covidview/index.html
ESRI (Environmental Systems Research Institute) COVID-19 Resourceshttps://coronavirus-disasterresponse.hub.arcgis.com/
COVDATA: a data package for R that collects and bundles datasets related to the COVID-19 pandemic from a variety of sources.https://kjhealy.github.io/covdata/index.html
BeOutBreakPrepared-nCoV2019https://github.com/beoutbreakprepared/nCoV2019/tree/master/latest_data
Kaggle COVID-19 Open Research Dataset Challenge (CORD-19)https://www.kaggle.com/allen-institute-for-ai/CORD-19-research-challenge
Kaggle Novel Corona Virus 2019 Datasethttps://www.kaggle.com/sudalairaikumar/novel-corona-virus-2019-dataset
Towards Data Science: Fighting the Covid-19: All the datasets and data efforts in one placehttps://towardsdatascience.com/fighting-the-covid-19-all-the-datasets-and-data-efforts-in-one-place-4d6aeb0157ab
GitHub Our World in Datahttps://github.com/owid
GitHub New York Times COVID-19 Datahttps://github.com/nytimes/covid-19-data
GitHub CSSE (Center for Systems Science and Engineering at Johns Hopkins) COVID-19 Daily Reportshttps://github.com/CSSEGISandData/COVID-19/tree/master/csse_covid_19_data/csse_covid_19_daily_reports
GitHub MIDAS Network Coordination Centerhttps://github.com/midas-network/COVID-19
University of Oxford Covid-19 Government Response Trackerhttps://www.bsg.ox.ac.uk/research/research-proiects/covid-19-government-response-tracker
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Figure 1

DataExplorer visualization of the underlying data structure (author generated).

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Figure 2

Number of deaths, confirmed cases, and cured cases in China (author generated).

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Figure 3

Total number of cases world-wide except China (author generated).

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Figure 4

Global confirmed cases by country using a wind rose (author generated).

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Figure 5

Global confirmed cases by country using a geographic map (author generated).

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Figure 6

Global confirmed cases for selected countries using a violin plot (author generated).

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Figure 7

Confirmed cases per capita for selected countries using a violin plot (author generated).

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Figure 8

Confirmed deaths per capita for selected countries using a violin plot (author generated).

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Figure 9

Global confirmed cases by country using an interactive density chart (author generated).

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Figure 10

Global confirmed deaths by country using a Shiny app horizontal bar chart (author generated).

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Figure 11

Confirmed COVID-19 cases by country using an interactive line chart web app (author generated).

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Figure 12

Global tracking dashboard (author generated).

Language: English
Submitted on: Mar 2, 2023
Accepted on: Oct 3, 2023
Published on: Oct 30, 2023
Published by: Ubiquity Press
In partnership with: Paradigm Publishing Services
Publication frequency: 1 issue per year

© 2023 Dennis F. X. Mathaisel, published by Ubiquity Press
This work is licensed under the Creative Commons Attribution 4.0 License.