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Bacterial Diversity in Roots, Stems, and Leaves of Chinese Medicinal Plant Paris polyphylla var. yunnanensis Cover

Bacterial Diversity in Roots, Stems, and Leaves of Chinese Medicinal Plant Paris polyphylla var. yunnanensis

Polish Journal of Microbiology
Volume 69 (2020): Issue 1 (March 2020)
By: TIAN-HAO LIU,  YIN ZHOU,  WEN-CONG TAO,  YANG LIU,  XIAO-MEI ZHANG and  SHOU-ZHENG TIAN  
Open Access
|Mar 2020

Figures & Tables

Fig. 1.

OTU relative abundances of roots, stems, and leaves (n = 6). S represents stems, R represents root, and L represents leaf.

Fig. 2.

Chao index of OTU level of roots, stems, and leaves (mean ± SD) (n = 6). S represents stems, R represents root, and L represents leaf. (0.01 < p ≤ 0.05 marked as *, 0.001 < p ≤ 0.01 marked as **, p ≤ 0.001 marked as ***).

Fig. 3.

Shannon index of OTU level of roots, stems, and leaves (mean ± SD) (n = 6). S represents stems, R represents root, and L represents leaf. (0.01 < p ≤ 0.05 marked as *, 0.001 < p ≤ 0.01 marked as **, p ≤ 0.001 marked as ***).

Fig. 4.

PCA of roots, stems, and leaves (n = 6). S represents stems, R represents root, and L represents leaf.

Fig. 5.

Percent of community abundance on the phylum level of roots, stems, and leaves (n = 6). S represents stems, R represents root, and L represents leaf.

Fig. 6.

Percent of community abundance on Genus level of roots, stems, and leaves (n = 6). S represents stems, R represents root, and L represents leaf.

Fig. 7.

Functional relative abundance of roots, stems, and leaves (n = 6). S represents stems, R represents root, and L represents leaf.

Fig. 8.

Significantly relative abundance of roots, stems, and leaves (mean ± SD) (n = 6). A: enriched in extracellular structures. B: enriched in the cytoskeleton. S represents stems, R represents root, and L represents leaf. (0.01 < p ≤ 0.05 marked as *, 0.001 < p ≤ 0.01 marked as **).

Microbial diversity indices in roots, stems, and leaves (mean ± SD) (n = 6)_

IndexMean ± SD (R)Mean ± SD (S)Mean ± SD (L) p-value (R-S) p-value (L-S) p-value (L-R)
Shannon2.66 ± 0.721.55 ± 0.580.72 ± 0.281.51E-021.07E-021.10E-04
Chao1614.36 ± 44.24467.46 ± 111.12386.30 ± 66.161.32E-021.55E-013.63E-05
DOI: https://doi.org/10.33073/pjm-2020-012 | Journal eISSN: 2544-4646 | Journal ISSN: 1733-1331
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Language: English
Page range: 91 - 97
Submitted on: Oct 9, 2019
|
Accepted on: Feb 13, 2020
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Published on: Mar 11, 2020
Published by: Polish Society of Microbiologists
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year
Keywords:
var.,
roots,
stems,
leaves,
endophytic microbiota
Related subjects:
Life sciences,
Microbiology and virology

© 2020 TIAN-HAO LIU, YIN ZHOU, WEN-CONG TAO, YANG LIU, XIAO-MEI ZHANG, SHOU-ZHENG TIAN, published by Polish Society of Microbiologists
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.

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