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Study of the genetic diversity of Korean, Chinese and Japanese landraces of barley (Hordeum vulgare L.) using microsatellites Cover

Study of the genetic diversity of Korean, Chinese and Japanese landraces of barley (Hordeum vulgare L.) using microsatellites

Open Access
|Feb 2012

References

  1. Anderson J. A., Churchill G. A., Autrique J. E., Sorrell M. E. & Tanksley S. D. 1993. Optimizing parental selection for genetic linkage maps. Genome 36: 181-186.10.1139/g93-02418469981
  2. Becker J. & Heum M. 1995. Barley microsatellite: allele variation and mapping. Plant Mol. Biol. 27: 835-845.10.1007/BF000202387727762
  3. Clark H. B. 1967. The origin and early history of the cultivated barleys. Agric. Hist. Rev. 15: 1-18.
  4. Cregan P. B., Bhagwat A. A., Akkaya M. S. & Rongwen J. 1994. Microsatellite fingerprinting and mapping of soybean. Methods in Molec. Cell Biol. 5: 49-61.
  5. Dawson I. K., Chalmers K. J., Waugh R. & Powell W. 1993. Detection and analysis of genetic variation in Hordeum sponteneum populations from Israel using RAPD markers. Molec. Ecol. 2: 151-159.10.1111/j.1365-294X.1993.tb00104.x
  6. Dice L. R. 1945. Measures of the amount of ecologic association between species. Ecol. 26: 297-302.10.2307/1932409
  7. Diwan N. & Cregan P. B. 1997. Automated sizing of fluorescent labeled simple sequence repeat (SSR) markers to assay genetic variation in soybean. Theor. Appl. Genetics 95: 723-733.10.1007/s001220050618
  8. Fregeau C. J. & Fourney R. N. 1993. DNA typing with fluorescently tagged short tandem repeats: a sensitive and accurate approach to human identification. BioTechn. 15: 100-119.
  9. Harlan J. R. 1979. On the origin of barley, Hordeum vulgare (Graminea-triticinae). In: N. W. Simmonds (ed.). Evolution of Crop Plants, pp. 93-98. Longman Group, London.
  10. Huang X. Q., Borner A., Roder M. S. & Ganal M. W. 2002. Assessing genetic diversity of wheat (Triticum aestivum L.) germplasm using microsatellite markers. Theor. Appl. Genetics 105: 699-707.10.1007/s00122-002-0959-412582483
  11. IBGS 1996. The 7th International Barley Genetics Symposium. University of Saskatchewan, Saskatoon, Canada.
  12. Keim P., Olson T. C. & Shoemarker R. C. 1992. Evaluation of soybean RFLP marker diversity in adapted germplasm. Theor. Appl. Genetics 85: 205-212.10.1007/BF0022286124197306
  13. Li J. L., Deng H., Lai D. B., Xu F., Chen J., Gao G., Recker R. R., & Deng H. W. 2001. Toward high- throughput genotyping: dynamic and automatic software for manipulating large-scale genotype data using fluorescently labeled dinucleotide markers. Genome Res. 11: 1304-1314.10.1101/gr.15970131108411435414
  14. Lin J., Jonathan K. J. M.; James A. S., Hunter S. B., Margaret H. M., William K. G., Ude N. & Benjamin F. M. 1996. Identification of molecular markers in soybean comparing RFLP, RAPD and AFLP DNA mapping techniques. Plant Molec. Biol. Repor. 14: 156-169.
  15. Morgante M. & Olivieri A. M. 1993. PCR-amplified microsatellites as markers in plant genetics. Plant J. 3: 175-182.10.1046/j.1365-313X.1993.t01-9-00999.x
  16. Nei M. 1973. Analysis of gene diversity in subdivided populations. Proceed. National Acad. Sci. 70: 3321-3323.10.1073/pnas.70.12.33214272284519626
  17. Nei M. 1978. Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89: 583-590.10.1093/genetics/89.3.583121385517248844
  18. Nevo E., Beiles A. & Zohary D. 1986. Genetic resources of wild barley in the Near East: structure, evoluation and application in breeding. Biol. J. Linnean Soc. 27: 355-380.
  19. Nevo E., Zohary D., Brown A. D. & Haber M. 1979. Genetic diversity and environmental associations of wild barley, Hordeum spontaneum, in Israel. Evolution 33: 815-833.
  20. Pakniyat H., Powell W., Baird E., Handley L. L., Robinson D., Scrimgeour C. M., Hackett C. A., Forster B. P., Nevo E. & Caligari P. D. 1997. AFLP variation in wild barley (Hordeum spontaneum C. Koch) with reference to salt tolerance and associated ecogeography. Genome 40: 332-341.10.1139/g97-04618464832
  21. Plucknett D. L., Smith N. H., Willams J. T. & Anishetty N. M. 1987. Genebanks and the world's food. Princeton University Press, Princeton, NJ, USA.
  22. Poehlman J. M. 1985. Adaptation and Distribution. In: D. C. Rusmusson (ed.). Barley, Agronomy series, 26, pp. 1-17. American Society of Agronomy Inc. CSSA. SSSA.10.2134/agronmonogr26.c1
  23. Röder M. S., Korzun V., Wendehake K., Plachke J., Tixier M. H., Leroy P. & Ganal M. W. 1998. A microsatellite map of wheat. Genetics 149: 2007-2023.10.1093/genetics/149.4.200714602569691054
  24. Rohlf N. J. 1997. NTSYS-PC: numerical taxonomy and multivariate analysis system. v 2.1. Applied Biostatistics. Exeter Software, New York.
  25. Saghai Maroof M. A., Biyashev R. M., Yang G. P., Zhang Q. & Allard R. W. 1994. Extraordinarily polymorphic microsatellite DNA in barley: species diversity, chromosomal location, and population dynamics. Proceed. National Acad. Sci. 91: 5466-5470.
  26. Smith R. N. 1995. Ccurate size comparison of short tandem repeatalleles amplified by PCR. BioTechn. 18: 112-128.
  27. Strelchenko P. P., Gumbareva N. K., Kovalyova O. N. & Graner A. 1996. Geographical and breeding trends within Eurasian cultivated barley germplasm revealed by molecular markers. In: S. H. Vaughan, D. A. Kazutoshi, O. Kazuto, S. Kaworu & M. Shoji (eds.). Plant Genetic Resources: Characterization and Evaluation, pp. 115-132. Japan Tsukuba, Research Council Secretariat of MAFF and National Institute of Agrobiological Resources, Kannondai 2-1-2.
  28. Turpeinen T., Tenhola T., Manninen O., Nevo E. & Nissilä E. 2001. Microsatellite diversity associated with ecology factors in Hordeum spontaneum populations in Israel. Molec. Ecol. 10: 1577-1591.10.1046/j.1365-294X.2001.01281.x
  29. Yeh F. C., Yang R. C. & Boyle T. 1999. POPGENE, version 1.31. Microsoft windows based freeware for population genetic analysis. http://www.ualberta.ca/~fyeh/fyeh
DOI: https://doi.org/10.2478/v10119-011-0018-6 | Journal eISSN: 2080-945X | Journal ISSN: 1897-2810
Language: English
Page range: 3 - 13
Published on: Feb 22, 2012
Published by: Adam Mickiewicz University
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year
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© 2012 Sang Park, Dong Lee, Hyung-Jin Baek, Jeongran Lee, Muhammad Farooq, published by Adam Mickiewicz University
This work is licensed under the Creative Commons License.

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