Skip to main content
Have a personal or library account? Click to login
Bioinformatic Analysis of Evolutional Conservatism and Functional Significance of Microsatellite Alleles of Human 14Q13.2 Region Associated with Type 2 Diabetes Mellitus Cover

Bioinformatic Analysis of Evolutional Conservatism and Functional Significance of Microsatellite Alleles of Human 14Q13.2 Region Associated with Type 2 Diabetes Mellitus

Proceedings of the Latvian Academy of Sciences. Section B. Natural, Exact, and Applied Sciences.
Volume 62 (2008): Issue 3 (June 2008)
By: ,  ,  ,   and    
Open Access
|Jul 2008
References

References

  1. Coux, O., Nothwang, H. G., Silva Pereira, I., Recillas Targa, F., Bey, F., Scherrer, K. (1994). Phylogenic relationships of the amino acid sequences of prosome (proteasome, MCP) subunits., 245, 769-780.
    Open DOISearch in Google Scholar
  2. Epplen, C., Santos, E. J., Maueler, W., van Helden, P., Epplen, J. T. (1997). On simple repetitive DNA sequences and complex diseases., 18, 1577-1585.
    Open DOISearch in Google Scholar
  3. Excoffier, L., Laval, G., Schneider, S. (2005). Arlequin ver. 3.0: An integrated software package for population genetics data analysis., 1, 47-50.
    Search in Google Scholar
  4. Gabellini, N. (2001). A polymorphic GT repeat from the human cardiac NaCaexchanger intron 2 activates splicing., 268, 1076-1083.
    Open DOISearch in Google Scholar
  5. Galande, S. (2002) Chromatic (dis)organization and cancer: BUR-binding proteins as biomarkers for cancer., 2, 157-190.
    Open DOISearch in Google Scholar
  6. Gebhard, F., Zänker, K. S., Brandt, B. (1999). Modulation of epidermal growth factor receptor gene transcription by a polymorphic dinucleotide repeat in intron 1., 274, 13176-13180.
    Open DOISearch in Google Scholar
  7. Grant, S. F., Thorleifsson, G., Reynisdottir, I., Benediktsson, R., Manolescu, A., Sainz, J., Helgason, A., Stefansson, H., Emilsson, V., Helgadottir, A., Styrkarsdottir, U., Magnusson, K. P., Walters, G. B., Palsdottir, E., Jonsdottir, T., Gudmundsdottir, T., Gylfason, A., Saemundsdottir, J., Wilensky, R. L., Reilly, M. P., Rader, D. J., Bagger, Y., Christiansen, C., Gudnason, V., Sigurdsson, G., Thorsteinsdottir, U., Gulcher, J. R., Kong, A., Stefansson, K. (2006). Variant of transcription factor 7 - like 2 () gene confers risk of type 2 diabetes., 38, 320-323.
    Open DOISearch in Google Scholar
  8. Grossi de Sa, M.-F., Martins de Sa, C., Harper, F., Olink-Coux, M., Huesca, M., Scherrer K. (1988). The association of prosomes with some of the intermediate filament networks of the animal cell., 107, 1517-1530.
    Open DOISearch in Google Scholar
  9. Horikawa, Y., Oda, N., Cox, N. J. (2000). Genetic variation in the gene encoding calpain-10 is associated with type 2 diabetes mellitus., 26, 135-137.
    Open DOISearch in Google Scholar
  10. Hui. J., Hung, L. H., Heiner, M., Schreiner, S., Neumuller, N., Reither, G., Haas S. A., Bindereif, A. (2005). Intronic CA-repeat and CA-rich elements: Anew class of regulators of mammalian alternative splicing.(European Molecular Biology Organisation), 24, 1988-1998.
    Search in Google Scholar
  11. Hui, J., Reither, G., Bindereif, A. (2003). Novel functional role of CA repeats and hnRNP L in RNA stability., 9, 931-936.
    Open DOISearch in Google Scholar
  12. Kashi, Y., King, D. G. (2006). Simple sequence repeats as advantageous mutators in evolution., 22, 253-259.
    Open DOISearch in Google Scholar
  13. Larsen, A., Weintraub, H. (1982). An altered DNA conformation detected by S1 nuclease occurs at specific regions in active chick globin chromatin., 29, 609-622.
    Open DOISearch in Google Scholar
  14. Majewski, J., Ott, J. (2000). GT repeats are associated with recombination on human chromosome 22., 10, 1108-1114.
    Open DOISearch in Google Scholar
  15. Ozaki, K., Sato, H., Iida, A., Mizuno, H., Nakamura, T., Miyamoto, Y., Takahashi, A., Tsunoda, T., Ikegawa, S., Kamatani, N., Hori, M., Nakamura, Y., Tanaka, T. (2006). A functional SNP inconfers risk of myocardial infarction in the Japanese population., 38, 921-925.
    Open DOISearch in Google Scholar
  16. Rana, N. A., Ebenezer, N. D., Webster A. R., Linares A. R., Whitehouse D. B., Povey S., Hardcastle A. J. (2004). Recombination hotspots and block structure of linkage disequilibrium in the human genome exemplified by detailed analysis of PGM1 on 1p31., 13, 3089-3102.
    Open DOISearch in Google Scholar
  17. Recillas-Targa, F., Razin, S. V., de Moura Gallo, C. V., Scherrer, K. (1994). Excision close to matrix attachment regions of the whole domain of the chicken alpha-globin gene domain by nuclease S1 and characterisation of the framing structures., 91, 4422-4426.
    Open DOISearch in Google Scholar
  18. Rome, S., Meugnier, E., Vidal, H., (2004). The ubiquitin-proteasome pathway is a new partner for the control of insulin signaling., 7, 249-254.
    Open DOISearch in Google Scholar
  19. Sharma, V. K., B-Rao, C., Sharma, A., Brahmachari, S. K., Ramachandran, S. (2003). (TG:CA)(n) repeats in human housekeeping genes., 21, 303-310.
    Open DOISearch in Google Scholar
  20. Sharma, V. K., Brahmachari, S. K., Ramachandar, S. (2005a) (TG/CA)repeats in human gene families: Abundance and selective patters of distribution according to function and gene length., 6, 83.
    Open DOISearch in Google Scholar
  21. Sharma, S., Rajan, U. M., Kumar, A., Soni, A., Ghosh, B. (2005b). A novel (TG)n(GA)m repeat polymorphism 254 bp downstream of the mast cell chymase (CMA1) gene is associated with atopic asthma and total serum IgE levels., 50, 276-282.
    Open DOISearch in Google Scholar
  22. Sjakste, N. I., Sjakste, T. G. (2002). Structure of globin gene domains in mammals and birds., 38(12), 1342-1358.
    Open DOISearch in Google Scholar
  23. Sjakste, N. I., Sjakste, T. G. (2007a). Possible involvement of DNA breaks in epigenetic regulation of cell differentiation., 43(5), 467-484.
    Open DOISearch in Google Scholar
  24. Sjakste, N., Sjakste, T. (2007b). Possible involvement of DNA strand breaks in regulation of cell differentiation., 51, 81-94.
    Search in Google Scholar
  25. Sjakste, T., Eglite, J., Sochnevs, A., Marga, M., Pirags, V., Collan, Y., Sjakste N. (2004). Microsatellite genotyping of chromosome 14q13.2-14q13 in the vicinity of proteasomal geneand association with Graves' disease in the Latvian population., 56, 238-243.
    Open DOISearch in Google Scholar
  26. Sjakste, T., Kalis, M., Poudziuas, I., Pirags, V., Lazdins, M., Groop, L., Sjakste, N. (2007a). Association of microsatellite polymorphisms of the human 14q13.2 region with type 2 diabetes mellitus in Latvian and Finnish populations., 71, 772-776.
    Open DOISearch in Google Scholar
  27. Sjakste, T., Poudziunas, I., Ninio, E., Perret, C., Pirags, V., Nicaud, V., Lazdins, M., Evans, A., Morrison, C., Cambien, F., Sjakste N. (2007b). SNPs ofgene—investigation of possible association with myocardial infarction and type 2 diabetes mellitus., 43, 442-448.
    Open DOISearch in Google Scholar
  28. Stallings, R. L., Ford, A. F., Nelson, D., Torney, D. C., Hildebrand, C. E., Moyzis, R. K. (1991). Evolution and distribution of (GT)n repetitive sequences in mammalian genomes., 10, 807-815.
    Open DOISearch in Google Scholar
  29. Tolstonog, G. V., Mothes, E., Shoeman, R. L., Traub, P. (2001). Isolation of SDS-stable complexes of the intermediate filament protein vimentin with repetitive, mobile, nuclear matrix attachment region, and mitochondrial DNA sequence elements from cultured mouse and human fibroblasts., 20, 531-554.
    Open DOISearch in Google Scholar
  30. Tolstonog, G. V., Li, G., Shoeman, R. L., Traub, P. (2005). Interactionof type III intermediate filament proteins with higher order structures of single-stranded DNA, particularly with G-quadruplex DNA., 24, 85-110.
    Open DOISearch in Google Scholar
  31. Tsunoda, T., Lathrop, G. M., Sekine, A., Yamada, R., Takahashi, A., Ohnishi, Y., Tanaka, T., Nakamura, Y. (2004). Variation of gene-based SNPs and linkage disequilibrium patterns in the human genome., 13, 1623-1632.
    Open DOISearch in Google Scholar
DOI: https://doi.org/10.2478/v10046-008-0001-6 | Journal eISSN: 2255-890X (formerly 1407-009X) | Journal ISSN: 1407-009X
Journal RSS Feed
Language: English
Page range: 91 - 102
Published on: Jul 9, 2008
Published by: Latvian Academy of Sciences
In partnership with: Paradigm Publishing Services
Keywords:
type 2 diabetes mellitus,
microsatellites,
Chromosome 14,
proteasomes,
PSMA6,
polymorphism,
evolution,
bioinformatics
Related subjects:
Mathematics,
General mathematics

© 2008 Tatjana Sjakste, Ilva Poudžiunas, Valdis Pīrāgs, Māris Lazdiñš, Nikolajs Sjakste, published by Latvian Academy of Sciences
This work is licensed under the Creative Commons License.

Volume 62 (2008): Issue 3 (June 2008)
Previous article
Next article