References
- Álvarez I (2003) Ribosomal ITS sequences and plant phylogenetic inference. Molecular Phylogenetics and Evolution 29(3):417–434. https://dx.doi.org/10.1016/S1055-7903(03)00208-210.1016/S1055-7903(03)00208-214615184
- Baldwin BG (1992) Phylogenetic utility of the internal transcribed spacers of nuclear ribosomal DNA in plants: An example from the compositae. Molecular Phylogenetics and Evolution 1(1):3–16. https://dx.doi.org/10.1016/1055-7903(92)90030-K10.1016/1055-7903(92)90030-K1342921
- Baldwin BG (1993) Molecular Phylogenetics of Calycadenia (Compositae) Based on ITS Sequences of Nuclear Ribosomal DNA: Chromosomal and Morphological Evolution Reexamined. American Journal of Botany 80(2):222. https://dx.doi.org/10.2307/244504310.1002/j.1537-2197.1993.tb13792.x
- Barzegari A, Vahed SZ, Atashpaz S, Khani S, Omidi Y (2010) Rapid and simple methodology for isolation of high quality genomic DNA from coniferous tissues (Taxus baccata). Mol Biol Rep 37(2):833–837. https://dx.doi.org/10.1007/s11033-009-9634-z10.1007/s11033-009-9634-z19649730
- Blanc-Jolivet C, Yanbaev Y, Kersten B, Degen B (2018) A set of SNP markers for timber tracking of Larix spp. in Europe and Russia. Forestry (Lond) 91(5):614–628. https://dx.doi.org/10.1093/forestry/cpy02010.1093/forestry/cpy020
- Brenner WG, Mader M, Müller NA, Hoenicka H, Schroeder H, Zorn I, Fladung M, Kersten B (2019) High Level of Conservation of Mitochondrial RNA Editing Sites Among Four Populus Species. G3 (Bethesda, Md.) 9(3):709–717. https://dx.doi.org/10.1534/g3.118.20076310.1534/g3.118.200763640459530617214
- Bruegmann T, Fladung M (2013) Potentials and limitations of the cross-species transfer of nuclear microsatellite marker in six species belonging to three sections of the genus Populus L. Tree Genetics & Genomes 9(6):1413–1421. https://dx.doi.org/10.1007/s11295-013-0647-310.1007/s11295-013-0647-3
- Bruegmann T, Fladung M (2019) Overexpression of both flowering time genes AtSOC1 and SaFUL revealed huge influence onto plant habitus in poplar 15(2):1–13. https://dx.doi.org/10.1007/S11295-019-1326-910.1007/s11295-019-1326-9
- Bruegmann T, Deecke K, Fladung M (2019) Evaluating the Efficiency of gRNAs in CRISPR/Cas9 Mediated Genome Editing in Poplars. International journal of molecular sciences 20(15). https://dx.doi.org/10.3390/ijms2015362310.3390/ijms20153623669623131344908
- Colpaert N, Cavers S, Bandou E, Caron H, Gheysen G, Lowe AJ (2005) Sampling Tissue for DNA Analysis of Trees: Trunk Cambium as an Alternative to Canopy Leaves. Silvae Genetica 541-6:265–269. https://dx.doi.org/10.1515/sg-2005-003810.1515/sg-2005-0038
- Degen B, Yanbaev Y, Mader M, Ianbaev R, Bakhtina S, Schroeder H, Blanc-Jolivet C (2021) Impact of Gene Flow and Introgression on the Range Wide Genetic Structure of Quercus robur (L.) in Europe. Forests 12(10):1425. https://dx.doi.org/10.3390/f1210142510.3390/f12101425
- Doyle JJ, Doyle JL (1990) Isolation of Plant DNA from Fresh Tissue. Focus 12(13):39–40
- Dumolin S, Demesure B, Petit RJ (1995) Inheritance of chloroplast and mitochondrial genomes in pedunculate oak investigated with an efficient PCR method. Theor Appl Genet 91:1253–1256. https://dx.doi.org/10.1007/BF0022093710.1007/BF0022093724170054
- Fladung M, Schroeder H, Wehenkel C, Kersten B (2015) Differentiation of six Eucalyptus trees grown in Mexico by ITS and six chloroplast barcoding markers. Silvae Genetica 641-6:121–130. https://dx.doi.org/10.1515/sg-2015-001210.1515/sg-2015-0012
- Janabi AHD, Kerkhof LJ, McGuinness LR, Biddle AS, McKeever KH (2016) Comparison of a modified phenol/chloroform and commercial-kit methods for extracting DNA from horse fecal material. Journal of Microbiological Methods 129:14–19. https://dx.doi.org/10.1016/j.mimet.2016.07.01910.1016/j.mimet.2016.07.01927460337
- Köchl S, Niederstätter H, Parson W (2005) DNA Extraction and Quantitation of Forensic Samples Using the Phenol–Chloroform Method and Real-Time PCR. In: Carracedo A. (Hrsg) Forensic DNA Typing Protocols. Methods in Molecular Biology. Humana Press, New Jersey, S 13–30. https://dx.doi.org/10.1385/1-59259-867-6:01310.1385/1-59259-867-6:01315570097
- Leple JC, Brasileiro AC, Michel MF, Delmotte F, Jouanin L (1992) Transgenic poplars: expression of chimeric genes using four different constructs. Plant cell reports 11(3):137–141. https://dx.doi.org/10.1007/BF0023216610.1007/BF0023216624213546
- Mader M, Schroeder H, Schott T, Schöning-Stierand K, Leite Montalvão AP, Liesebach H, Liesebach M, Fussi B, Kersten B (2020) Mitochondrial Genome of Fagus sylvatica L. as a Source for Taxonomic Marker Development in the Fagales. Plants 9(10):1274. https://dx.doi.org/10.3390/plants910127410.3390/plants9101274765081432992588
- Müller NA, Kersten B, Leite Montalvão AP, Mähler N, Bernhardsson C, Bräutigam K, Carracedo Lorenzo Z, Hoenicka H, Kumar V, Mader M, Pakull B, Robinson KM, Sabatti M, Vettori C, Ingvarsson PK, Cronk Q, Street NR, Fladung M (2020) A single gene underlies the dynamic evolution of poplar sex determination. Nature plants 6(6):630–637. https://dx.doi.org/10.1038/s41477-020-0672-910.1038/s41477-020-0672-932483326
- Renshaw MA, Olds BP, Jerde CL, McVeigh MM, Lodge DM (2015) The room temperature preservation of filtered environmental DNA samples and assimilation into a phenol-chloroform-isoamyl alcohol DNA extraction. Mol Ecol Re-sour 15(1):168–176. https://dx.doi.org/10.1111/1755-0998.1228110.1111/1755-0998.12281431248224834966
- Sambrook J, Fritsch E, Maniatis T (1989) Molecular cloning; A laboratory manual. Second edition. Cold Spring Harbor, New York
- Schott T, Schroeder H, Schöning-Stierand K, Kersten B (2019) The complete chloroplast genome sequence of Pinus cembra L. (Pinaceae). Mitochondrial DNA. Part B, Resources 4(2):4202–4203. https://dx.doi.org/10.1080/23802359.2019.169329710.1080/23802359.2019.1693297770774733366383
- Schröder H, Yanbaev Y, Kersten B, Degen B (2019) Short note: Development of a new set of SNP markers to measure genetic diversity and genetic differentiation of Mongolian oak (Quercus mongolica Fisch. ex Ledeb.) in the Far East of Russia. Silvae Genetica 68(1):85–91. https://dx.doi.org/10.2478/sg-2019-001610.2478/sg-2019-0016
- Schroeder H, Hoeltken AM, Fladung M (2012) Differentiation of Populus species using chloroplast single nucleotide polymorphism (SNP) markers--essential for comprehensible and reliable poplar breeding. Plant Biology 14(2):374–381. https://dx.doi.org/10.1111/j.1438-8677.2011.00502.x10.1111/j.1438-8677.2011.00502.x21973311
- Schroeder H, Cronn R, Yanbaev Y, Jennings T, Mader M, Degen B, Kersten B (2016) Development of Molecular Markers for Determining Continental Origin of Wood from White Oaks (Quercus L. sect. Quercus). PloS one 11(6). https://dx.doi.org/10.1371/journal.pone.015822110.1371/journal.pone.0158221492482927352242
- Schroeder H, Kersten B, Fladung M (2017) Development of Multiplexed Marker Sets to Identify the Most Relevant Poplar Species for Breeding. Forests 8(12):492. https://dx.doi.org/10.3390/f812049210.3390/f8120492
- Souza HAV, Muller LAC, Brandão RL, Lovato MB (2012) Isolation of high quality and polysaccharide-free DNA from leaves of Dimorphandra mollis (Leguminosae), a tree from the Brazilian Cerrado. Genetics and molecular research : GMR 11(1):756–764. https://dx.doi.org/10.4238/2012.March.22.610.4238/2012.March.22.622576834