References
- Al-Qurainy F, Khan S, Nadeem M, Tarroum M (2015) SCoT marker for the assessment of genetic diversity in Saudi Arabian date palm cultivars. Pakistan Journal of Botany 47(2): 637-643.
- Andersen JR, Lübberstedt T (2003) Functional markers in plant. Trends in Plant Science 8: 554-560. https://doi.org/10.1016/j.tplants.2003.09.010
- Balthazard MG (2013) Hybridization in the genus Phoenix: A review. Emirates Journal of Food and Agriculture 25(11): 831-842. https://doi.org/10.9755/ejfa.v25i11.16660
- Collard BCY, Mackill DJ (2009) Start codon targeted (SCoT) polymorphism: A simple, novel DNA marker technique for generating gene-targeted markers in plants. Plant Molecular Biology Reporter 27: 86-93. https://doi.org/10.1007/s11105-008-0060-5
- Elhoumaizi MA, Saaidi M, Oihabi A, Cilas C (2002) Phenotypic diversity of date-palm cultivars (Phoenix dactylifera L.) from Morocco. Genetic Resources and Crop Evolution 49: 483-490. https://doi.org/10.1023/a:1020968513494
- Evanno G, Regnaut S, Goudet J (2005) Detecting the number of clusters of individuals using the software structure: A simulation study. Molecular Ecology 14: 2611-2620. https://doi.org/10.1111/j.1365-294x.2005.02553.x
- Gajera HP, Bambharolia RP, Domadiya RK, Patel SV, Golakiya BA (2014) Molecular characterization and genetic variability studies associated with fruit quality of indigenous mango (Mangifera indica L.) cultivars. Plant Systematics and Evolution 300 (5): 1011-1020. https://doi.org/10.1007/s00606-013-0939-y
- Ghislain M, Zhang DP, Fajardo D, Huamán Z, Hijmans RJ (1999) Marker-assisted sampling of the cultivated Andean potato Solanum phureja collection using RAPD markers. Genetic Resources and Crop Evolution 46: 547-555. https://doi.org/10.1023/a:1008724007888
- Govaerts R, Dransfield J (2005) World checklist of palms. Roy. Bot. Gardens, Kew.
- Gupta PK, Rustgi S (2004) Molecular markers from the transcribed/ expressed region of the genome in higher plants. Functional and Integrative Genomics 4: 139-162. https://doi.org/10.1007/s10142-004-0107-0
- Hachicha M, Ben Aissa I (2014) Managing salinity in Tunisian oases. Life Science Journal 8(9): 775-782. https://doi.org/10.17265/1934-7391/2014.09.007
- Hajibarat Z, Saidi A, Hajibarat Z, Talebi R (2015) Characterization of genetic diversity in chickpea using SSR markers, Start Codon Targeted Polymorphism (SCoT) and Conserved DNA-Derived Polymorphism (CDDP). Physiology and molecular biology of plants 21(3) : 365-373. https://doi.org/10.1007/s12298-015-0306-2
- Hamza H, Jemni M, Benabderrahim MA, Mrabet A, Touil S, Othmani A, Salah MB (2015) Date Palm status and perspective in Tunisia. In Date Palm Genetic Resources and Utilization (pp. 193-221). Springer, Dordrecht. https://doi.org/10.1007/978-94-017-9694-1_6
- Holland JB (2001) Epistasis and plant breeding. Plant Breeding Reviews 21: 27-92. https://doi.org/10.1002/9780470650196.ch2
- Jiang LF, Qi X, Zhang XQ, Huang LK, Ma X, Xie WG (2014) Analysis of diversity and relationships among orchardgrass (Dactylis glomerata L.) accessions using start codon-targeted markers. Genetics and molecular research 13 (2): 4406-4418. https://doi.org/10.4238/2014.june.11.4
- Kallamadi PR, Ganga Rao Nadigatlab VPR, Mulpuri S (2015) Molecular diversity in castor (Ricinus communis L.). Industrial Crops and Products 66: 271-281. https://doi.org/10.1016/j.indcrop.2014.12.061
- Peakall R, Smouse PE (2012) GenAlEx 6.5. Genetic analysis in Excel. Population genetic software for teaching and research an update. Bioinformatics 28: 2537-2539. https://doi.org/10.1093/bioinformatics/bts460
- Perrier X, Jacquemoud-Collet JP (2006) DARwin Software
- Prevost A, Wilkinson MJ (1999) A new system of comparing PCR primers applied to ISSR fingerprinting of potato cultivars. Theoretical and Applied Genetics 98: 107-112. https://doi.org/10.1007/s001220051046
- Pritchard JK, Stephens M, Rosenberg NA, Donnelly P (2000) Association mapping in structured populations. The American Journal of Human Genetics 67: 170-181. https://doi.org/10.1086/302959
- Que Y, Pan Y, Lu Y, Yang C, Yang Y, Huang N, Xu L (2014) Genetic Analysis of Diversity within a Chinese Local Sugarcane Germplasm Based on Start Codon Targeted Polymorphism. BioMed Research International 2014: 1-10. https://doi.org/10.1155/2014/468375
- Rajesh MK, Sabana A, Rachana KE, Rahman S, Jerard BA, Karun A (2015) Genetic relationship and diversity among coconut (Cocos nucifera L.) accessions revealed through SCoT analysis. 3Biotech 5 : 999-1006. https://doi.org/10.1007/s13205-015-0304-7
- Rhouma A (1994) Le palmier dattier en Tunisie. Le patrimoine génétique Vol I. Arabesques Editions et Créations, Tunis, Tunisie.
- Rhouma A (2005) Le palmier dattier en Tunisie. Le patrimoine génétique Vol II. IPGRI, Rome, Italy.
- Rhouma S, Dakhlaoui-Dkhil S, Ould Mohamed Salem A, Zehdi-Azouzi S, Rhouma A, Marrakchi M, Trifi M (2008) Genetic diversity and phylogenic relationships in date-palms (Phoenix dactylifera L.) as assessed by Random Amplified Microsatellite Polymorphism markers (RAMPOs). Scientia Horticulturae 117: 53-57. https://doi.org/10.1016/j.scienta.2008.03.013
- Rhouma S, Zehdi S, Ould MSA, Rhouma A, Marrakchi M, Trifi M (2007) Genetic diversity in ecotypes of Tunisian date-palm (Phoenix dactylifera L.) assessed by AFLP markers. The Journal of Horticultural Science and Biotechnology 82 (6): 929-933. https://doi.org/10.1080/14620316.2007.11512328
- Rhouma-Chatti S, Choulak S, Zehdi-Azouzi S, Chatti K, Said K (2014) Molecular polymorphism and phylogenetic relationships within Tunisian date palm (Phoenix dactylifera L.): evidence of non-coding trnL-trnF regions of chloroplast DNAs. Scientia Horticulturae 170: 32-38. https://doi.org/10.1016/j.scienta.2014.02.027
- Ryman N, Leimar O (2009) Gst is still a useful measure of genetic differentiation – a comment on Jost’s D. Molecular Ecology 18: 2084-2087. https://doi.org/10.1111/j.1365-294x.2009.04187.x
- Saitou N, Nei M (1987) The neighbor-joining method: A new method for reconstructing phylogenetic trees. Molecular Biology and Evolution 4:406-425. https://doi.org/10.1093/oxfordjournals.molbev.a040454
- Sambrook J, Frithsch EF, Maniatis T (1989) Molecular Cloning: a Laboratory Manual, second ed. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York.
- Sawant SV, Singh PK, Gupta SK, Madnala R, Tuli R (1999) Conserved nucleotide sequences in highly expressed genes in plants. Journal of Genetics 78: 123-131. https://doi.org/10.1007/bf02924562
- Shahlaei A, Torabi S, Khosroshahli M (2014) Efficiacy of SCoT and ISSR markers in assesment of tomato (Lycopersicum esculentum Mill.) genetic diversity. International Journal of Biosciences 5 (2): 14-22.
- Trifi M, Rhouma A, Marrakchi M (2000) Phylogenetic relationships in Tunisian date palm (Phoenix dactylifera L.) germplasm collection using DNA amplification fingerprinting. Agronomie 20: 1-7. https://doi.org/10.1051/agro:2000158
- Vivodik M, Gálová Z, Balážová Z, Petrovičová L (2016) Start codon targeted (SCoT) polymorphism reveals genetic diversity in European old maize (Zea mays L.) Genotypes. Potravinarstvo Scientific Journal for Food Industry 10: 563-569. https://doi.org/10.5219/660
- Xie WG, Zhang XQ, Ma X, Cai HW, Huang LK, Peng Y, Zeng B (2010) Diversity comparison and phylogenetic relationships of cocksfoot (Dactylis glomerata L.) germplasm as revealed by SSR markers. Canadian Journal of Plant Science 90: 13-21. https://doi.org/10.4141/cjps08192
- Xie WG, Zhang XQ, Ma X, Huang LK, Zeng B (2009) Genetic variation of Dactylis glomerata germplasm from Southwest China detected by SSR markers. Acta Prataculturae Sinica 18: 138-146.
- Yan XB, Guo YX, Zhou H, Wang K (2006) Analysis of geographical conditions affected on genetic variation and relationship among populations of Elymus. Journal of Plant Resources and Environment 15: 17-24.
- Yeh F, Yang R, Boyle T (1999) POPGENE Version 1.32. Microsoft Window-based Freeware for Population Genetic Analysis. Molecular Biology and Biotechnology Center, University of Alberta, Edmonton.
- Zehdi S, Trifi M, Ould Mohamed Salem A, Rhouma A, Marrakchi M (2002) Survey of inter simple sequence repeat polymorphisms in Tunisian date palms (Phoenix dactylifera L.). Journal of Genetics & Breeding 56: 77-83.
- Zehdi S, Cherif E, Rhouma-Chatti S, Santoy S, Salhi Hannachi A, Pintaud JC (2012) Molecular polymorphism and genetic relationships in date palm (Phoenix dactylifera L.): the utility of nuclear microsatellite markers. Scientia Horticulturae 148: 255-263. https://doi.org/10.1016/j.scienta.2012.10.011
- Zehdi-Azouzi S, Cherif E, Guenni K, Ben Abdelkrim A, Bermil A, Rhouma S, Ben Salah M, Santoni S, Pintaud JC, Aberlenc-Bertossi F, Salhi Hannachi A (2016) Endemic insular and coastal Tunisian date palm genetic diversity. Genetica 144:181-190. https://doi.org/10.1007/s10709-016-9888-z