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A study on the phylogeny and phylogeography of a marine cosmopolite diatom from the southern Black Sea Cover

A study on the phylogeny and phylogeography of a marine cosmopolite diatom from the southern Black Sea

By: Özgür Baytut  
Open Access
|Jan 2014

Abstract

A single-cell PCR method was applied to Pseudo-nitzschia pungens strains from the southern Black Sea. Based on the aligment set of the LSU D1-D3 region, a Bayesian molecular phylogeny analysis and a parsimony network analysis were used to investigate phylogenetic clades (Clades I-III) in P. pungens and to determine the ancestral clades. The parsimony network analysis also demonstrated that ancestral haplotypes belonged to Clade II, residing around the northeastern Pacific, while Clade I was distributed globally but antitropicaly. According to the findings of this study, the Black Sea strain (Clade III) shows a global phylogeographic pattern.

DOI: https://doi.org/10.2478/s13545-013-0096-5 | Journal eISSN: 1897-3191 | Journal ISSN: 1730-413X
Language: English
Page range: 406 - 411
Published on: Jan 23, 2014
Published by: University of Gdańsk
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year

© 2014 Özgür Baytut, published by University of Gdańsk
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.