Morphological characterisation and diagnostics of Xiphinema non-americanum group species (Nematoda: Longidoridae) from Romania using mutiplex PCR
By: M. Groza, S. Lazarova, C. Costache, F. Luca, I. Rosca, E. Fanelli and V. Peneva
References
- [1] Altschul S. F., Madden T. L., Schaffer A. A., Zhang J., Zhang Z., Miller W., Lipman D. J. (1997): Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res., 25: 3389–3402 http://dx.doi.org/10.1093/nar/25.17.3389
- [2] Avgelis A. D., Tzortzakakis E. A. (2001): Occurence of viruses and Xiphinema spp. in vineyards of the Greek islands of Paros and Limnos. Phytopathol. Mediterr., 40: 284–288
- [3] Barsi, L. Lamberti, F. (2000a): Morphometric variations and juvenile stages of Xiphinema diversicaudatum (Micoletzky, 1927) Thorne, 1939 and X. index Thorne et Allen, 1950 (Nematoda: Dorylaimida) from the former territory of Yugoslavia. Nematol. Mediterr., 28: 171–187
- [4] Barsi, L. Lamberti, F. (2000b): Morphometric variations and juvenile stages of Xiphinema vuittenezi (Nematoda: Dorylaimida) in Serbia. Nematol. Mediterr., 28: 3–12
- [5] Brown, D. J. F., Topham, P. (1985): Morphometric variability between populations of Xiphinema diversicaudatum (Nematoda: Dorylaimoidea). Revue Nématol., 1: 15–26
- [6] Castillo, P., Vovlas, N., Subbotin, S., Troccoli, A. (2003): A new root-knot nematode, Meloidogyne baetica n. sp. (Nematoda: Heteroderidae) parasitizing wild olive in Southern Spain. Phytopathology, 93: 1093–1102 http://dx.doi.org/10.1094/PHYTO.2003.93.9.1093
- [7] Cohn, E. (1977): Xiphinema italiae. C.I.H Descriptions of Plant parasitic Nematodes, Set 7, No 95
- [8] Coiro, M. I., Lamberti, F., Agostinelli, A., Vindimian, M. E. (1989): I Longidoridae nei vigneti del Trentino. II: Il genere Xiphinema Cobb. Nematol. Mediterr., 17: 139–148
- [9] Coomans, A., Huys, R., Heyns, J., Luc, M. (2001): Character analysis, phylogeny and biogeography of the genus Xiphinema Cobb, 1913 (Nematoda: Longidoridae). Annales Sciences Zoologiques, Muse’e Royal de l’Afrique Centrale, Tervuren, 287: 1–239
- [10] de Luca, F., Reyes, A., Grunder, J., Kunz, P., Agostinelli, A., de Giorgi, C., Lamberti, F. (2004): Characterization and sequence variation in the rDNA region of six nematode species of the genus Longidorus (Nematoda). J. Nematol., 36: 147–152
- [11] Finetti-Sialer, M. M., Ciancio, A. (2005): Isolate-specific detection of Grapevine fanleaf virusfrom Xiphinema index through DNA-based molecular probes. Phytopathology, 95(3): 262–268. DOI: 10.1094/PHYTO-95-0262 http://dx.doi.org/10.1094/PHYTO-95-0262
- [12] Goodey, J. B., Peacock, F. C., Pitcher, R. S. (1960): A redescription of Xiphinema diversicaudatum (Micoletzky, 1927) Thorne, 1939 and observations on its larval stages. Nematologica, 5: 127–135 http://dx.doi.org/10.1163/187529260X00497
- [13] Gutiérrez-Gutiérrez, C., Rius, J. E. P., Cantalapiedra-Navarrete, C., Landa, B. B., Castillo, P. (2011): Prevalence, polyphasic identification, and molecular phylogeny of dagger and needle nematodes infesting vineyards in southern Spain. Eur. J. Plant Pathol., 129(3): 427–453. DOI: 10.1007/s10658-010-9705-y http://dx.doi.org/10.1007/s10658-010-9705-y
- [14] He, Y., Subbotin S., Rubtsova, T. V., Lamberti, F., Brown, D. J. F., Moens, M. (2005): A molecular phylogenetic approach to Longidoridae (Nematoda: Dorylaimida). Nematology, 7: 111–124 http://dx.doi.org/10.1163/1568541054192108
- [15] Heyns, J. Coomnas, A. (1984): The genus Xiphinema in South Africa. VIII. Xiphinema diversicaudatum (Micoletzky, 1927) Thorne, 1939. Phytophylactica, 16: 117–120
- [16] Ivezic, M., Raspudic, E., Lamberti, F., Pribetic, D. J. (2002): Xiphinema spp. in vineyards of Istra Peninsula in Croatia. Helminthologia, 39(2): 119–120
- [17] Jawhar, J., Vovlas N., Digiaro, M. (2006): Occurrence of Xiphinema index in Lebanese vineyards. J. Plant Pathol., 88(1): 117–119
- [18] Jeanmougin, F., Thompson J. D., Gouy, M., Higgins, D. G., Gibson, T. J. (1998): Multiple sequence alignment with Clustal X. Trends Biochem. Sci., 23: 403–405 http://dx.doi.org/10.1016/S0968-0004(98)01285-7
- [19] Kumari, S. (2004): The occurrence of Xiphinema vuittenezi, X. pachtaicum and Longidorus leptocephalus (Nematoda: Dorylaimida) in the Central Czech Republic. Helminthologia, 41: 103–108
- [20] Kumari, S. (2006): Xiphinema simile (Nematoda: Longidoridae) in the Czech Republic and a note on other Xiphinema species. Helminthologia, 43: 43–50. DOI: 10.2478/s11687-006-0009-x http://dx.doi.org/10.2478/s11687-006-0009-x
- [21] Kumari, S., Decraemer, W., Lišková, M. (2009): Molecular and morphological delineation of Longidorus poessneckensis Altherr, 1974 (Nematoda: Dorylaimida). Eur. J. Plant Pathol., 123: 125–137. DOI: 10.1007/s10658-008-9348-4 http://dx.doi.org/10.1007/s10658-008-9348-4
- [22] Kumari, S., Di Cesare, A. (2013): Nicotinamide dehydrogenase subunit 4 analysis of Xiphinema diversicaudatum and Xiphinema simile (Nematoda: Longidoridae). Eur. J. Plant Pathol., 136(4): 803–810. DOI: 10.1007/s10658-013-0208-5 http://dx.doi.org/10.1007/s10658-013-0208-5
- [23] Kumari, S., Lišková, M. (2009): Molecular confirmation of Xiphinema italiae Meyl, 1953 (Nematoda: Longidoridae) from the Slovak Republic. Helminthologia, 46(2): 131–134. DOI: 10.2478/s11687-009-0025-8 http://dx.doi.org/10.2478/s11687-009-0025-8
- [24] Lamberti, F., Choleva, B. Agostinelli, A. (1983): Longidoridae from Bulgaria (Nematoda, Dorylaimida) with description of three new species of Longidorus and two new species of Xiphinema. Nematol. Mediterr., 11: 49–72
- [25] Lamberti, F., Iovev, T., Choleva B., Brown, D. J. F., Agostinelli, A., Radicci, V. (1997): Morphometric variation and juvenile stages of some longidorid nematodes from Bulgaria with comments on the number of juvenile stages of Longidorus africanus, L. closelongatus and Xiphinema santos. Nematol. Mediterr., 25: 213–237
- [26] Lamberti, F., Sabová, M., De Luca, F., Molinari, S., Agostinelli, A., Coiro, M., Valocká B. (1999): Phenotypic variation and genetic characterization of Xiphinema populations from Slovakia (Nematoda: Dorylaimida). Nematol. Mediterr., 27: 261–275
- [27] Lazarova, S., Elshishka, M., Groza, M., Peneva, V. (2010): Nematodes of Longidoridae and Trichodoridae from riparian habitats in Bulgaria. (Abstract). Proceedings of 30th International Symposium of European Society of Nematologists, 19–23 September, 2010, Vienna, Austria, p. 127
- [28] Lišková, M., Brown, D. J. F. (1998): Longidoridae (Nematoda) associated with walnut tree (Juglans regia L.) in Slovak Republic. Helminthologia, 35(2): 95–99
- [29] Lišková, M., Brown, D. J. F. (1999): The occirrence of Longidoridae (Nematoda) in forests in the Slovak Republic. Helminthologia, 36(1): 49–56
- [30] Lišková, M. Sturhan, D. (2000): Occurrence and ecology of Longidoridae (Nematoda: Dorylaimida) in floodplain forests in the Slovak Republic. Helminthologia, 37(2): 113–117
- [31] Lišková, M. (1995): Nematodes — virus vectors in the rhizosphere of fruit-trees and soft fruits in Slovakia. Helminthologia, 32(1–2): 43–48
- [32] Lišková, M. (1997): Nematodes of the family Longidoridae in the rhizosphere of the grapevines in the Slovak Republic. Helminthologia, 34: 87–95
- [33] Lišková, M. (2001): Longidoridae (Nematoda: Dorylaimida) in natural grassland of fluvial plains and river banks in the Slovak Republic. Helminthologia, 38: 47–50
- [34] Luc, M., Lima, M. B., Weischer, B., Flegg, J. J. M. (1964): Xiphinema vuittenezi n. sp. (Nematoda: Dorylaimidae). Nematologica, 10: 151–163 http://dx.doi.org/10.1163/187529264X00781
- [35] Magunacelaya, J. C., Lamberti, F., Ahumada, M. T. (2004): On the occurence of Xiphinema index Thorne et Allen in Chile. Nematol. Mediterr., 32(2): 235–236
- [36] Macfarlane, S. A., Neilson, R., Brown, D. J. F. (2002). Nematodes. Adv. Bot. Res., 36: 169–198. http://dx.doi.org/10.1016/S0065-2296(02)36063-4
- [37] Meza, P., Aballay, E., Hinrichsen, P. (2012): Morphological and molecular characterisation of Xiphinema index Thorne and Allen, 1950 (Nematoda: Longidoridae) isolates from Chile. Nematropica, 42: 41–47
- [38] Peneva, V., Choleva, B. (1992): Nematodes of the family Longidoridae from forest nurseries in Bulgaria. II. Genus Xiphinema Cobb, 1913. Хeлмцнмологця, 32: 47–66
- [39] Pitcher, R.,S., Siddiqi, M. R., Brown, D. J. F. (1974): Xiphinema diversicaudatum. C.I.H Descriptions of Plant parasitic Nematodes, Set 4, No. 60.
- [40] Roca, F., Bravo, M. (1997): Multivarite analysis of Xiphinema diversicaudatum and some related species (Nematoda: Longidoridae). Fundam. Appl. Nematol., 20: 357–369
- [41] Roca, F., Lamberti, F. (1993): I Longidoridae (Nematoda, Dorylaimida) delle regioni Italiane. XIII. La Toscana. Nematol. Mediterr., 21: 261–272
- [42] Roca, F., Lamberti, F., Agostinelli, A. (1988): I Longidoridae (Nematoda, Dorylaimida) delle regioni Italiane. VII. Il Piemonte e la valle D”Aosta. Nematol. Mediterr., 16: 35–51
- [43] Roca, F., Lamberti, F., Agostinelli, A. (1989): I Longidoridae (Nematoda, Dorylaimida) delle regioni Italiane. IX. La Sicilia. Nematol. Mediterr., 17: 151–165
- [44] Roca, F., Lamberti F., D’Errico, F. P. (1991): I Longidoridae (Nematoda, Dorylaimida) delle regioni Italiane. XI. La Campania. Nematol. Mediterr., 19: 139–154
- [45] Romaşcu, E., Zinca, V. (1974): Xiphinema index Thorne et Allen 1950 (Nematoda: Dorylaimidae) a new nematode pest of vine. Analele I.C.P.P., 10: 273–283
- [46] Romaşcu, E., Zinca, V. (1977): Xiphinema vuittenezi (Nematoda: Dorylaimidae) — a parasitic nematode of the vine roots. Analele I.C.P.P., 12: 283–288
- [47] Romaşcu, E. (1971): Xiphinema americanum Cobb, 1913 and Xiphinema italiae Meyl, 1953 (Nematoda: Dorylaimidae), new pests of vine. Analele I.C.P.P., 7: 203–209
- [48] Romaşcu, E. (1981): Xiphinema diversicaudatum (Micoletzky, 1927) Thorne, 1939 (Nematoda, Dorylaimoidea) — a pest vector of plant virus disease. Analele I.C.P.P., 16: 261–265
- [49] Seinhorst J.W. (1959): A rapid method for the transfer of nematodes from fixative to anhydrous glycerin. Nematologica, 4: 67–69 http://dx.doi.org/10.1163/187529259X00381
- [50] Siddiqi, M. R. (1974): Xiphinema index. C.I.H Descriptions of Plant parasitic Nematodes, Set 3, No. 45
- [51] Sturhan, D. (1963): Beitreg zur Systematik der Gattung Xiphinema Cobb, 1913. Nematologica, 9: 205–214 http://dx.doi.org/10.1163/187529263X00377
- [52] Sturhan, D., Wouts, W. M., Grandison, G. S., Barber, C. J. (1997): Nematode vectors of plant viruses in New Zealand. N.Z. J. Zool., 24: 309–322 http://dx.doi.org/10.1080/03014223.1997.9518127
- [53] Tamura, K., Peterson, D., Peterson, N., Stecher, G., Nei M., Kumar, S. (2011): MEGA5: Molecular evolutionary genetics analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony methods. Mol. Biol. Evol., 28: 2731–2739. DOI:10.1093/molbev/msr121 http://dx.doi.org/10.1093/molbev/msr121
- [54] Taylor, C. E., Brown, D. J. F. (1997): Nematode vectors of plant viruses. CAB International. Retrieved from http://www.amazon.com/Nematode-Vectors-Plant-Viruses-Taylor/dp/0851991599 286 pp.
- [55] Thorne, G. (1939): A monograph of the nematodes of the superfamily Dorylaimoidea. Capita Zoologica, 8: 1–261
- [56] Tiefenbrunner, A., Tiefenbrunner, W. (2004): Longidoridae (Nematoda: Dorylaimida) from the rhizosphere of the wild growing grape (Vitis vinifera ssp.silvestris) in the riparian woods of the rivers Danube and March in Austria. Helminthologia, 41: 45–53
- [57] Tzortzakakis, E. A., Pateras, D., Charoulis, A. (2006): Occurrence of Xiphinema species in grapevine areas of Tyrnavos with comments on the distribution of X. italiae in Greece. Helminthologia, 43(3): 186–187. DOI: 10.2478/s11687-006-0034-9 http://dx.doi.org/10.2478/s11687-006-0034-9
- [58] Vrain, T. C., Wakarchuk, D. A., Levesque, A., Hamiltonr, I. (1992): Intraspecific DNA restriction fragment length polymorphism in the Xiphinema americanum group. Fundam. Appl. Nematol., 15: 563–573
- [59] Walker, G. E. (2004): New Australian record for Xiphinema vuittenezi on Vitis vinifera. Australas. Plant Pathol., 33: 131–132. DOI: 10.1071/AP03071 http://dx.doi.org/10.1071/AP03071
- [60] Wang, X., Bosselut, N., Castagnone, C., Voisin, R., Abad, P., Esmenjaud, D. (2003): Multiplex polymerase chain reaction identification of single individuals of the Longodorid nematodes Xiphinema index, X. diversicaudatum, X. vuittenezi and X. italiae using specific primers from ribosomal genes. Nematology, 93(2): 160–166
Language: English
Page range: 215 - 231
Published on: Feb 22, 2014
Published by: Slovak Academy of Sciences, Institute of Parasitology
In partnership with: Paradigm Publishing Services
Publication frequency: Volume open
Keywords:
Related subjects:
© 2014 M. Groza, S. Lazarova, C. Costache, F. Luca, I. Rosca, E. Fanelli, V. Peneva, published by Slovak Academy of Sciences, Institute of Parasitology
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.