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Acute myelogenous leukemia – current recommendations and approaches in molecular-genetic assessment Cover

Acute myelogenous leukemia – current recommendations and approaches in molecular-genetic assessment

Open Access
|Jun 2022

References

  1. 1. VAKITI A., MEWAWALLA P. Acute Myeloid Leukemia. In: StatPearls, StatPearls Publishing, Treasure Island (FL), 2021.
  2. 2. POGOSOVA-AGADJANYAN E., MOSELEY A., OTHUS M., APPELBAUM F. Chauncey T., Chen I. et al. AML risk stratification models utilizing ELN-2017 guidelines and additional prognostic factors: a SWOG report. Biomark Res. 2020, 8:29.10.1186/s40364-020-00208-1742515932817791
  3. 3. STRIMBU K., TAVEL J. What are biomarkers? Curr. Opin. HIV AIDS. 2010;5(6):463–466.10.1097/COH.0b013e32833ed177
  4. 4. NAIR M., SANDHU S., SHARMA A., Cancer molecular markers: A guide to cancer detection and management. Seminars in Cancer Biology. 2018;52(1):39–55.10.1016/j.semcancer.2018.02.00229428478
  5. 5. VERMA M. Personalized medicine and cancer. J Pers Med. 2012;2(1):1–14.10.3390/jpm2010001425136325562699
  6. 6. LADINES-CASTRO W., BARRAGAN-IBANEZ G., LUNA-PEREZ M., SANTOYO-SANCHEZ A., COLLAZO-JALLOMA J., MENDOZA-GARCIA E. et al. Morphology of leukaemias. Rev Med Hosp Gen Mex. 2016;79(2):107–113.10.1016/j.hgmx.2015.06.007
  7. 7. SCHIFFER C., STONE R. Morphologic Classification and Clinical and Laboratory Correlates. In: Holland-Frei Cancer Medicine. 6th edition. Hamilton (ON): BC Decker; 2003.
  8. 8. VARDIMAN J., HARRIS N., BRUNNING R. The World Health Organization (WHO) classification of the myeloid neoplasms. Blood. 2002; 100(7): 2292–2302.10.1182/blood-2002-04-119912239137
  9. 9. BLUM W., BLOOMFIELD C. Acute Myeloid Leukemia. In: Harrison’s Principles of Internal Medicine. McGraw-Hill, New York, 2018:739-748.
  10. 10. ARBER D., ORAZI A., HASSERJIAN R., THIELE J., BOROWITZ M., LE BEAU M. et al. The 2016 revision to the World Health Organization classification of myeloid neoplasms and acute leukemia. Blood. 2016; 127(20):2391–2405.10.1182/blood-2016-03-64354427069254
  11. 11. HEROLD T., ROTHENBERG-THURLEY M., GRUNWALD V., JANKE H., GOERLICH D., SAUERLAND M. et al. Validation and refinement of the revised 2017 European LeukemiaNet genetic risk stratification of acute myeloid leukemia. Leukemia. 2020;34:3161–3172.10.1038/s41375-020-0806-0768597532231256
  12. 12. DOHNER H., ESTEY E., GRIMWADE D., AMADORI S., APPELBAUM F., BUCHNER T. et al. Diagnosis and management of AML in adults: 2017 ELN recommendations from an international expert panel. Blood. 2017;129(4):424–447.10.1182/blood-2016-08-733196529196527895058
  13. 13. YOHE S. Molecular Genetic Markers in Acute Myeloid Leukemia. J Clin Med. 2015;4(3):460-78.10.3390/jcm4030460447013926239249
  14. 14. CONNEELY S., STEVENS A. Acute Myeloid Leukemia in Children: Emerging Paradigms in Genetics and New Approaches to Therapy. Curr Oncol Rep. 2021;23(2):16.10.1007/s11912-020-01009-3780655233439382
  15. 15. ELGARTEN C,. APLENC, R. Pediatric acute myeloid leukemia: updates on biology, risk stratification, and therapy. Current Opinion in Pediatrics. 2020;32(1):57–6610.1097/MOP.000000000000085531815781
  16. 16. ABEL H., DUNCAVAGE E. Detection of structural DNA variation from next generation sequencing data: a review of informatic approaches. Cancer Genet. 2013;206(12):432–440.10.1016/j.cancergen.2013.11.002444182224405614
  17. 17. WEINBERG O., SOHANI A., BHARGAVA P., NARDI V. Diagnostic work-up of acute myeloid leukemia. Am J Hematol. 2017;92(3):317–32110.1002/ajh.2464828066929
  18. 18. NAIR M., SANDHU S., SHARMA A. Prognostic and Predictive Biomarkers in Cancer. Curr Cancer Drug Targets. 2014;14(5):477–504.10.2174/156800961466614050611111824807144
  19. 19. IBANEZ M., SUCH E., ONECHA E., GOMEZ-SEGUI I., LIQUIORI A., SELLES J. et al. Analysis of SNP Array Abnormalities in Patients with DE NOVO Acute Myeloid Leukemia with Normal Karyotype. Sci Rep. 2020;10(1):5904.10.1038/s41598-020-61589-9712515032246042
  20. 20. BERRY N., SCOTT R., ROWLINGS P., ENJETI A. Clinical use of SNP-microarrays for the detection of genome-wide changes in haematological malignancies. Crit Rev Oncol Hematol. 2019;142:58–67.10.1016/j.critrevonc.2019.07.01631377433
  21. 21. LEISCH M., JANSKO B., ZABORANSKY N., GREIL R., PLEYER L. Next Generation Sequencing in AML-On the Way to Becoming a New Standard for Treatment Initiation and/or Modulation? Cancers (Basel). 2019;11(2):252.10.3390/cancers11020252640695630795628
  22. 22. JAISWAL S., NATARAJAN P., SILVER A., GIBSON C., BICK A., SHVARTZ E. et al. Clonal Hematopoiesis and Risk of Atherosclerotic Cardiovascular Disease. N Engl J Med. 2017;377(2):111–121.10.1056/NEJMoa1701719671750928636844
  23. 23. PAPAEMMANUIL E., GERSTUNG M., BULLIGER L., GAIDZIK V., PASCHKA P., ROBERTS N. et al. Genomic Classification and Prognosis in Acute Myeloid Leukemia. N Engl J Med. 2016;374(23):2209–222110.1056/NEJMoa1516192497999527276561
  24. 24. WOOLBRIGHT W., WONG V., SEVERSON E., KUO D. The Application of Next-generation Sequencing Tumor Molecular Profiling in the Diagnosis and Management of a Case of Acute Myelogenous Leukemia With MLL-PTD in a Pediatric Heart Transplant Recipient. Journal of Pediatric Hematology/Oncology. 2021;43(2):246–e24910.1097/MPH.000000000000177232134843
  25. 25. HAN E., YOO J., CHAE H., LEE S., KIM D., KIM K. et al. Detection of BRCA1/2 large genomic rearrangement including BRCA1 promoter-region deletions using next-generation sequencing. Clin Chim Acta. 2020;505:49-54.10.1016/j.cca.2020.02.02332092317
  26. 26. LEVINE R., VALK P. Next-generation sequencing in the diagnosis and minimal residual disease assessment of acute myeloid leukemia. Haematologica. 2019;104(5):868-871.10.3324/haematol.2018.205955651890030923100
  27. 27. ARTECHE-LOPEZ A., ÁVILLA-FERNANDEZ A., ROMERO R., RIVEIRO-ÁLVAREZ R., LOPEZ-MARTINEZ A., GIMENEZ-PARDO A. et al. Sanger sequencing is no longer always necessary based on a single-center validation of 1109 NGS variants in 825 clinical exomes. Sci Rep. 2021; 11:5697.10.1038/s41598-021-85182-w795254233707547
  28. 28. HEATHER J., CHAIN B. The sequence of sequencers: The history of sequencing DNA. Genomics. 2016;107(1):1–8.10.1016/j.ygeno.2015.11.003472778726554401
  29. 29. MENDOZA H., PODOLTSEV N., SIDDON A. Laboratory evaluation and prognostication among adults and children with CEBPA-mutant acute myeloid leukemia. Int J Lab Hematol. 2021;43 Suppl 1:86–95.10.1111/ijlh.1351734288448
  30. 30. O’BRIEN G., ZYLA J., MANOLA K., PAGONI M., POLANSKA J., BADIE C. Identification of two novel mutations in human acute myeloid leukemia cases. Leuk Lymphoma. 2021;62(2):454–461.10.1080/10428194.2020.183266433161783
  31. 31. TOKGUN P., ALAY M., ATLI TEKIN S., GULER N., TOKGUN O., DEMIRAY A. et al. Two Novel CEBPA Mutations in a Turkish Patient with Acute Myeloid Leukemia. Balkan J Med Genet. 2021;23(2):99–102.10.2478/bjmg-2020-0024800956633816079
  32. 32. PRAY L. The Biotechnology Revolution: PCR and the Use of Reverse Transcriptase to Clone Expressed Genes. Nature Education. 2008;1(1):94
  33. 33. GUO Y., SUN H., ZHANG D., ZHAO Y., SHI M., YANG M. et al. Development of a highly sensitive method for detection of FLT3D835Y. Biomark Res. 2020;8:30.10.1186/s40364-020-00210-7742499832817792
  34. 34. GORNIAK P., EJDUK A., BORG K., MAKUSH-LASIKA H., NOWAK G., LESH-MARANDA E. et al. Comparison of high-resolution melting analysis with direct sequencing for the detection of recurrent mutations in DNA methyltransferase 3A and isocitrate dehydrogenase 1 and 2 genes in acute myeloid leukemia patients. Eur J Haematol. 2016; 96:181–187.10.1111/ejh.1256625891904
  35. 35. KUMAR D., MEHTA A., PANIGRAHI M., NATH S., SAIKIA K. NPM1 Mutation Analysis in Acute Myeloid Leukemia: Comparison of Three Techniques - Sanger Sequencing, Pyrosequencing, and Real-Time Polymerase Chain Reaction. Turk J Haematol. 2018;35(1):49–53.10.4274/tjh.2017.0095584377429129825
  36. 36. OMMEN H. Monitoring minimal residual disease in acute myeloid leukaemia: a review of the current evolving strategies. Ther Adv Hematol. 2016;7(1):3–16.10.1177/2040620715614529471388726834951
  37. 37. HUIJSMANS C., POODT J., DAMEN J., VAN DER LINDEN J., SAVELKOUL P., PRUJIT J. et al. (2012) Single Nucleotide Polymorphism (SNP)-Based Loss of Heterozygosity (LOH) Testing by Real Time PCR in Patients Suspect of Myeloproliferative Disease. PLoS ONE. 2012;7(7):e38362.10.1371/journal.pone.0038362338808222768290
  38. 38. KSIAZEK T., CZOGALA M., KACZOWKA P., SADOWSKA B., PAWINSKA-WASIKOWSKA K., BIK-MULTANOWSKI M. et al. High Frequency of Fusion Gene Transcript Resulting From t(10;11)(p12;q23) Translocation in Pediatric Acute Myeloid Leukemia in Poland. Front Pediatr. 2020;8:278.10.3389/fped.2020.00278736638432754558
  39. 39. GARIBYAN L., AVASHIA N. Polymerase chain reaction. J Invest Dermatol. 2013;133(3):1–4.10.1038/jid.2013.1410230823399825
  40. 40. HOMIG-HOLZEL C., SAVOLA S. Multiplex ligation-dependent probe amplification (MLPA) in tumor diagnostics and prognostics. Diagn Mol Pathol. 2012;21(4):189–206.10.1097/PDM.0b013e318259551623111197
  41. 41. PAYNE A., BEAN C., HOOPER W., MILLER C. Utility of multiplex ligation-dependent probe amplification (MLPA) for hemophilia mutation screening. J Thromb Haemost. 2012;10(9):1951–4.10.1111/j.1538-7836.2012.04843.x452138622759210
  42. 42. ALPAR D., DE JONG D., SAVOLA S., YIGITTOP H., KAJTAR B., KERESKAI L. et al. MLPA is a powerful tool for detecting lymphoblastic transformation in chronic myeloid leukemia and revealing the clonal origin of relapse in pediatric acute lymphoblastic leukemia. Cancer Genet. 2012;205(9):465–9.10.1016/j.cancergen.2012.05.00722939399
  43. 43. ALHOURANI E., RINCIC M., OTHMAN M., POHLE B., SCHLIE C., GLASER A. et al. Comprehensive chronic lymphocytic leukemia diagnostics by combined multiplex ligation dependent probe amplification (MLPA) and interphase fluorescence in situ hybridization (iFISH). Mol Cytogenet 2014;7:79.10.1186/s13039-014-0079-2424764425435911
  44. 44. KOSZTOLANYI S., KISS R., ATANESYAN L., GANGO A., DE GROOT K., STEENKAMER M. et al. High-Throughput Copy Number Profiling by Digital Multiplex Ligation-Dependent Probe Amplification in Multiple Myeloma. J Mol Diagn. 2018;20(6):777–788.10.1016/j.jmoldx.2018.06.00430096382
  45. 45. YU C., LIN T., JOU S., LIN C., LIN K., LU M. et al. MLPA and DNA index improve the molecular diagnosis of childhood B-cell acute lymphoblastic leukemia. Sci Rep. 2020;10:11501.10.1038/s41598-020-68311-9735933232661308
  46. 46. RACK K., VAN DEN BERG E., HAFERLACH C., BEVERLOO H., COSTA D., ESPINET B. et al. European recommendations and quality assurance for cytogenomic analysis of haematological neoplasms. Leukemia. 2019;33;1851–1867.10.1038/s41375-019-0378-z675603530696948
  47. 47. WHEELER F., KIM A., MOSSE C., SHAVER A., YENAMANDRA A., SEEGMILLER A. Limited Utility of Fluorescence In Situ Hybridization for Recurrent Abnormalities in Acute Myeloid Leukemia at Diagnosis and Follow-up. Am J Clin Pathol. 2018;149(5):418–424.10.1093/ajcp/aqy002588892129538617
DOI: https://doi.org/10.2478/rjim-2022-0004 | Journal eISSN: 2501-062X | Journal ISSN: 1220-4749
Language: English
Page range: 103 - 114
Submitted on: Dec 10, 2021
|
Published on: Jun 14, 2022
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year

© 2022 Dinnar Yahya, Mari Hachmeriyan, Ilina Micheva, Trifon Chervenkov, published by N.G. Lupu Internal Medicine Foundation
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.