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The genetic variability of small-ruminant lentiviruses and its impact on tropism, the development of diagnostic tests and vaccines and the effectiveness of control programmes Cover

The genetic variability of small-ruminant lentiviruses and its impact on tropism, the development of diagnostic tests and vaccines and the effectiveness of control programmes

By: Monika Olech  
Open Access
|Dec 2023

Figures & Tables

Overview of SRLV subtypes

SubtypeCountry of originSpeciesGenomic fragments used for classificationReferences
A1MexicoGoatsgag (578 bp)2
ItalyGoatsgag (800 bp)63
BelgiumSheep and goatsgag-pol (1.8 kb), pol (1.2 kb)97
PolandGoatsgag (625 bp), env (~400 bp)125
BrazilGoatspol (239 bp)68
IcelandSheepgag-pol (1.8 kb), pol (1.2 kb), RT (~300bp)162
A2MexicoSheepgag (578 bp)2
ChinaSheepWhole genome179
BrazilSheepLTR (460 bp)30
TurkeySheepgag (800 bp)111
CanadaSheep and goatsgag (1200 bp)159
ChinaSheepwhole genome177
North AmericaSheepgag-pol (1.8 kb), pol (1.2 kb), RT (~300bp)162
A3TurkeySheepgag (800 bp)111
ItalySheepgag-pol (800 bp)15
SwitzerlandSheep and goatsgag-pol (1.8 kb), pol (1.2 kb), RT (~300bp)162
A2/A3Czech RepublicSheep and goatsgag-pol (800 bp)14
SpainSheepgag-pol (800 bp)52
A4SwitzerlandSheep and goatsgag-pol (1.8 kb), pol (1.2 kb), RT (~300bp)162
GermanySheepgag (~400 bp)104
A5SloveniaSheepgag-pol (1.8 kb), pol (1.2 kb)80
TurkeySheepgag (800 bp)111
ItalyGoatsgag-pol (800 bp)15
PolandGoatsgag (625 bp)118
GermanySheepgag (~400 bp)102
SwitzerlandGoatsgag-pol (1.8 kb), pol (1.2 kb), RT (~300bp)162
A6FranceSheep and goatsRT (~300 bp)162
A7SwitzerlandGoatspol (1. 2 kb)162
A8ItalyGoatsgag (800 bp)17
A9ItalySheep and goatsgag-pol (800 bp)15
TurkeySheepgag (800 bp)111
A10ItalyGoatspol (1. 2 bp)144
A11TurkeySheepgag (800 bp)111
ItalySheep and goatsgag-pol (800 bp)54
GermanySheepgag (~400 bp)102
A12PolandSheep and goatsgag (625 bp), env (610 bp)119
A13PolandSheepgag (625 bp), env (~400 bp)125
A14SloveniaGoatsgag-pol (1.8 kb), pol (1.2 kb)80
A15SloveniaSheepgag-pol (1.8 kb), pol (1.2 kb)80
A16PolandGoatsgag (625 bp), env (~400 bp)128
GermanySheepgag (~400 bp)102
A17PolandGoatsgag (625 bp), env (~400 bp)128
A18PolandSheepgag (625 bp)128
A19*ItalyGoatsFull genome, gag-pol (800 bp)15, 34
A20*ItalySheep and goatsgag-pol (800 bp)15, 34
A21GermanySheepgag (~400 bp)102
A22IranSheepgag (~400 bp)102
A23ItalySheep and goatsgag-pol (800 bp)15
A24ItalySheepgag-pol (800 bp)15
A25*PolandSheepgag (625 bp)119
A26*PolandSheepgag (625 bp), env (610 bp)119
A27PolandGoatsgag (625 bp), env (610 bp)122
B1JapanGoatsgag (~529 bp)79
MexicoSheep and goatsLTR (300 bp), gag (578 bp)2, 96
ItalySheep and goatsgag-pol (800 bp)101
SloveniaGoatsgag-pol (1.8 kb), pol (1.2 kb)80
CanadaGoatsgag (1200 bp)159
BelgiumGoatsgag-pol (1.8 kb), pol (1.2 kb)97
PhilippinesGoatspartial gag133
U.S.Sheep and goatsgag-pol (1.8 kb), pol (1.2 kb)162
BrazilSheep and goatsenv (~400bp), gag (625 bp)22
PolandGoatsgag (625 bp)128
FranceGoatsRT (~300 bp)162
B2SpainSheepgag-pol (1.8 kb), pol (1.2 kb)57
ItalySheepgag-pol (800 bp)15
Czech RepublicSheepgag-pol (800 bp)14
PolandSheep and goatsgag (625 bp)119
SwitzerlandSheepgag-pol (1.8 kb), pol (1.2 kb)162
FranceSheep and goatsRT (~300 bp)162
B3ItalySheep and goatsgag-pol (800 bp)15
B4CanadaGoatsgag-pol (1.8 kb), pol (1.2 kb)90
B5BelgiumGoatsgag-pol (1.8 kb), pol (1.2 kb)97
CNorwaySheep and goatspol (710 bp), tat-env (2.1–2.4 kp)55
DSwitzerlandSheep and goatspol (1.2 kb)162
E1ItalyGoatsgag-pol (800 bp)63
E2ItalyGoatsgag-pol (800 bp)63
Language: English
Page range: 479 - 502
Submitted on: Jun 19, 2023
Accepted on: Nov 13, 2023
Published on: Dec 19, 2023
Published by: National Veterinary Research Institute in Pulawy
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year

© 2023 Monika Olech, published by National Veterinary Research Institute in Pulawy
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.