Have a personal or library account? Click to login
Analysis of Nickel-Binding Proteins from Various Animal Sera Cover

Analysis of Nickel-Binding Proteins from Various Animal Sera

Open Access
|Jul 2018

References

  1. 1. Andreini, C., Bertini, I., Rosato, A., 2009: Metalloproteomes: a bioinformatic approach. Acc. Chem. Res., 42, 1471—1479.10.1021/ar900015x
  2. 2. Barnett, J. P., Scanlan, D. J., Blindauer, C. A., 2012: Protein fractionation and detection for metalloproteomics: challenges and approaches. Anal. Bioanal. Chem., 402, 3311—3322.10.1007/s00216-012-5743-y
  3. 3. Cameron, K. S., Buchner, V., Tchounwou, P. B., 2011: Exploring the molecular mechanisms of nickel-induced genotoxicity and carcinogenicity: a literature review. Rev. Environ. Health., 26, 81—92.10.1515/reveh.2011.012
  4. 4. CDC, 2004: Toxicological profile for copper [Accessed April 15, 2015;http://www.atsdr.cdc.gov/toxprofiles/tp132.pdf.]
  5. 5. CDC, 2005: Toxicological profile for zinc [Accessed April 15, 2015]; http://www.atsdr.cdc.gov/toxprofiles/tp60.pdf.
  6. 6. CDC, 2007: Toxicological profile of lead. [Accessed April 15, 2015]; http://www.atsdr.cdc.gov/toxprofiles/tp13.pdf.
  7. 7. CDC, 2012: Toxicological profile for cadmium. [Accessed April 15, 2015]; http://www.atsdr.cdc.gov/toxprofiles/tp5.pdf.
  8. 8. Cempel, M., Nikel, G., 2006: Nickel: a review of its sources and environmental toxicology. Pol. J. Environ. Stud., 15, 375—382.
  9. 9. Chow, B. A., Donahue, S. W., Vaughan, M. R., McConkey, B., Vijayan, M. M., 2013: Serum immune-related proteins are differentially expressed during hibernation in the American black bear. PLoS One, 8, e66119.10.1371/journal.pone.0066119
  10. 10. de Reuse, H., Vinella, D., Cavazza, C., 2013: Common themes and unique proteins for the uptake and trafficking of nickel, a metal essential for the virulence of Helicobacter pylori. Front. Cell. Infect. Microbiol., 3, 94.10.3389/fcimb.2013.00094
  11. 11. EggNOG database. Carnivora. Amino acid transport and metabolism, Haptoglobin. [online], http://eggnogdb.embl.de/#/app/results#ENOG410CHIEdatamenu.
  12. 12. Gao, Y., Chen, C., Zhao, J., Zhang, P., Chai, Z., He, W., Huang, Y., 2003: An improved method for analysis of distribution of metalloproteins in human liver cytosol by synchrotron radiation X-ray fluorescence. Anal. Chim. Acta, 485, 131—137.10.1016/S0003-2670(03)00347-7
  13. 13. Hagedoorn, P. L., 2015: Microbial Metalloproteomics. Proteomes, 3, 424.10.3390/proteomes3040424521738828248278
  14. 14. Hara, M., Fujinaga, M., Kuboi, T., 2005: Metal binding by citrus dehydrin with histidine-rich domains. J. Exp. Bot., 56, 2695—2703.10.1093/jxb/eri26216131509
  15. 15. Honda, R., Katabuchi, H., 2014: Pathological aspect and pathogenesis of endometriosis. In Harada, T. (Ed.):Endometriosis: Pathogenesis and Treatment. Springer Japan, 9—18.10.1007/978-4-431-54421-0_2
  16. 16. Hu, C., Chan, S. I., Sawyer, E. B., Yu, Y., Wang, J., 2014: Metalloprotein design using genetic code expansion. Chem. Soc. Rev., 43, 6498—6510.10.1039/C4CS00018H24699759
  17. 17. Jones, A. L., Hulett, M. D., Parish, C. R., 2005: Histidine-rich glycoprotein: A novel adaptor protein in plasma that modulates the immune, vascular and coagulation systems. Immunol. Cell. Biol., 83, 106—118.10.1111/j.1440-1711.2005.01320.x
  18. 18. Khan, S., Moheman, A., 2006: Effect of heavy metals (cadmium and nickel) on the seed germination, growth and metals uptake by Chilli (Capsicum frutescens) and sunflower plants (Helianthus annuus). Pollution Research, 25, 99—104.
  19. 19. Lavery, K., Way, A., Killian, G., 2003: Identification and immunohistochemical localization of a haptoglobin-like protein in the tissues and fluids of the bovine (Bos taurus) ovary and oviduct. Reproduction, 125, 837—846.10.1530/rep.0.1250837
  20. 20. Lee, M. H., Pankratz, H. S., Wang, S., Scott, R. A., Finnegan, M. G., Johnson, M. K., et al., 1993: Purification and characterization of Klebsiella aerogenes UreE protein: a nickel-binding protein that functions in urease metallocenter assembly. Protein Sci., 2, 1042—1052.10.1002/pro.5560020617
  21. 21. Loftin, I. R., Blackburn, N. J., McEvoy, M. M., 2009: Tryptophan Cu (I)–π interaction fine-tunes the metal binding properties of the bacterial metallochaperone CusF. J. Biol. Inorg. Chem., 14, 905—912.10.1007/s00775-009-0503-y
  22. 22. Martino, L., He, Y., Hands-Taylor, K. L., Valentine, E. R., Kelly, G., Giancola, C., Conte, M. R., 2009: The interaction of the Escherichia coli protein SlyD with nickel ions illuminates the mechanism of regulation of its peptidyl-prolyl isomerase activity. FEBS J., 276, 4529—4544.10.1111/j.1742-4658.2009.07159.x
  23. 23. Mejáre, M., Bülow, L., 2001: Metal-binding proteins and peptides in bioremediation and phytoremediation of heavy metals. Trends Biotechnol., 19, 67—73.10.1016/S0167-7799(00)01534-1
  24. 24. Mlynarcik, P., Bencurova, E., Madar, M., Mucha, R., Pulzova, L., Hresko, S., Bhide, M., 2012: Development of simple and rapid elution methods for proteins from various affinity beads for their direct MALDI-TOF downstream application. J. Proteomics, 75, 4529—4535.10.1016/j.jprot.2012.03.001
  25. 25. Mominoki, K., Morimatsu, M., Karjalainen, M., Hohtola, E., Hissa, R., Saito, M., 2005: Elevated plasma concentrations of haptoglobin in European brown bears during hibernation. Comp. Biochem. Physiol. A Mol. Integr. Physiol., 142, 472—477.10.1016/j.cbpa.2005.09.017
  26. 26. Mori, S., Takahashi, H. K., Yamaoka, K., Okamoto, M., Nishibori, M., 2003: High affinity binding of serum histidine-rich glycoprotein to nickel-nitrilotriacetic acid: the application to microquantification. Life Sci., 73, 93—102.10.1016/S0024-3205(03)00261-3
  27. 27. Nair, N. G., Perry, G., Smith, M. A., Reddy, V. P., 2010: NMR studies of zinc, copper, and iron binding to histidine, the principal metal ion complexing site of amyloid-β peptide. J. Alzheimer’s Dis., 20, 57—66.10.3233/JAD-2010-134620164601
  28. 28. Pfam database. trypsin Ailuropoda melanoleuca. [online], https://pfam.xfam.org/search/keyword?query=trypsin+Ailuropoda+melanoleuca.
  29. 29. Poonkothai, M., Vijayavathi, B. S., 2012: Nickel as an essential element and a toxicant. Int. J. Environ. Sci., 1, 285—288.
  30. 30. Porath, J., 1988: IMAC-Immobilized metal ion affinity based chromatography. Trends in Analytical Chemistry, 7, 254—259.10.1016/0165-9936(88)85074-X
  31. 31. Samal, L., Mishra, C., 2011: Significance of nickel in livestock health and production. International Journal for Agro Veterinary and Medical Sciences, 5, 349—361.10.5455/ijavms.20110331111304
  32. 32. Sevcenco, A. M., Hagen, W. R., Hagedoorn, P. L., 2012: Microbial metalloproteomes explored using MIRAGE. Chem. Biodivers., 9, 1967—1980.10.1002/cbdv.20110041222976984
  33. 33. She, Y. M., Narindrasorasak, S., Yang, S., Spitale, N., Roberts, E. A., Sarkar. B., 2003: Identification of metal-binding proteins in human hepatoma lines by immobilized metal affinity chromatography and mass spectrometry. Mol. Cell. Proteomics, 2, 1306—1318.10.1074/mcp.M300080-MCP20014534351
  34. 34. Shevchenko, A., Tomas, H., Havlis, J., Olsen, J. V., Mann, M., 2006: In-gel digestion for mass spectrometric characterization of proteins and proteomes. Nat. Protoc., 1, 2856—2860.10.1038/nprot.2006.46817406544
  35. 35. Shi, W., Zhan, C., Ignatov, A., Manjasetty, B. A., Marinkovic, N., Sullivan, M., Huang, R., Chance, M. R., 2005: Metalloproteomics: high-throughput structural and functional annotation of proteins in structural genomics. Structure, 13, 1473—1486.10.1016/j.str.2005.07.01416216579
  36. 36. Tristao, G. B., Assuncao, L. do P., Dos Santos, L. P., Borges, C. L., Silva-Bailao, M. G., Soares, C. M., et al., 2014: Predicting copper-, iron-, and zinc-binding proteins in pathogenic species of the Paracoccidioides genus. Front. Microbiol., 5, 761.10.3389/fmicb.2014.00761428832125620964
  37. 37. Waldron, K. J., Rutherford, J. C., Ford, D., Robinson, N. J., 2009: Metalloproteins and metal sensing. Nature, 460, 823–830.10.1038/nature0830019675642
  38. 38. Wang, F., Chmil, C., Pierce, F., Ganapathy, K., Gump, B. B., MacKenzie, J. A., et al., 2013: Immobilized metal affinity chromatography and human serum proteomics. J. Chromatogr. B Analyt. Technol. Biomed. Life Sci., 934, 26—33.10.1016/j.jchromb.2013.06.03223896426
  39. 39. Yokoi, K., Uthus, E. O., Nielsen, F. H., 2002: The essential use of nickel affects physiological functions regulated by the cyclic-GMP signal transduction system. In Proceedings of the 7th International Symposium on Metal Ions in Biology and Medicine, May 5—9, St. Petersburg, Russia.
  40. 40. Zhang, Y., Rodionov, D. A., Gelfand, M. S., Gladyshev, V. N., 2009: Comparative genomic analyses of nickel, cobalt and vitamin B12 utilization. BMC Genomics, 10, 78.10.1186/1471-2164-10-78266754119208259
DOI: https://doi.org/10.2478/fv-2018-0017 | Journal eISSN: 2453-7837 | Journal ISSN: 0015-5748
Language: English
Page range: 59 - 66
Submitted on: Feb 26, 2018
Accepted on: May 10, 2018
Published on: Jul 17, 2018
Published by: The University of Veterinary Medicine and Pharmacy in Košice
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year

© 2018 J. Šimková, M. Milkovičová, M. Valko-Rokytovská, Z. Kostecká, E. Bencúrová, L. Pulzová, Ľ. Čomor, M. R. Bhide, published by The University of Veterinary Medicine and Pharmacy in Košice
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.