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Biochemical variances through metabolomic profile analysis of Capsicum chinense Jacq. during fruit development Cover

Biochemical variances through metabolomic profile analysis of Capsicum chinense Jacq. during fruit development

Folia Horticulturae
Volume 33 (2021): Issue 1 (June 2021)
By: Yaping Tang,  Guoru Zhang,  Tao Yang,  Shengbao Yang,  Patiguli Aisimutuola,  Baike Wang,  Ning Li,  Juan Wang and  Qinghui Yu  
Open Access
|Mar 2021

Figures & Tables

Figure 1

Capsicum chinense Jacq pepper fruit developmental stages; green ripening stage (A), colour transit stage (B), and the red ripening stage (C).
Capsicum chinense Jacq pepper fruit developmental stages; green ripening stage (A), colour transit stage (B), and the red ripening stage (C).

Figure 2

PCA analysis of the three fruit developmental stages (green ripening period (A), colour transit period (B), and the red ripening stage (C)). PCA, principal component analysis.
PCA analysis of the three fruit developmental stages (green ripening period (A), colour transit period (B), and the red ripening stage (C)). PCA, principal component analysis.

Figure 3

Volcano diagram illustrating the difference in the expression levels of metabolites in the study groups.
Volcano diagram illustrating the difference in the expression levels of metabolites in the study groups.

Figure 4

Venn diagram for expressed genes detected at each developmental stage.
Venn diagram for expressed genes detected at each developmental stage.

Figure 5

KEGG enrichment pathway analysis of DEGs between the three study groups (Figure A: A vs. B, Figure B: A vs. C and Figure C: B vs. C). The KEGG pathway is shown by the left Y-axis while the X-axis shows the Rich factor. A high q-value is represented by blue and a low q-value is represented by red (q < 0.05).
KEGG enrichment pathway analysis of DEGs between the three study groups (Figure A: A vs. B, Figure B: A vs. C and Figure C: B vs. C). The KEGG pathway is shown by the left Y-axis while the X-axis shows the Rich factor. A high q-value is represented by blue and a low q-value is represented by red (q < 0.05).

Figure 6

CCA analysis diagram of green ripening period (A) and colour conversion period (B). CCA, canonical correlation analysis.
CCA analysis diagram of green ripening period (A) and colour conversion period (B). CCA, canonical correlation analysis.

Results of the differential metabolites (A represents 16 DPA, B represents 36 DPA and C represents 48 DPA)_

Group nameAll diffDown-regulatedUp-regulated
A vs. B465320145
A vs. C610405205
B vs. C1024557

KEGG annotation results of different metabolites in each group (A represents 16 DPA, B represents 36 DPA and C represents 48 DPA)_

GroupDiff numberDiff KEGG Annotation
A vs. B46527
A vs. C61029
B vs. C1026
DOI: https://doi.org/10.2478/fhort-2021-0001 | Journal eISSN: 2083-5965 | Journal ISSN: 0867-1761
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Language: English
Page range: 17 - 26
Submitted on: Aug 11, 2020
|
Accepted on: Dec 28, 2020
|
Published on: Mar 2, 2021
Published by: Polish Society for Horticultural Sciences (PSHS)
In partnership with: Paradigm Publishing Services
Publication frequency: 2 issues per year
Keywords:
Jacq.,
chili pepper,
GC-MS,
LC-MS,
pepper fruit diversity,
pepper fruit morphology,
untargeted metabolomics
Related subjects:
Life sciences,
Plant science,
Zoology,
Ecology,
Life sciences, other

© 2021 Yaping Tang, Guoru Zhang, Tao Yang, Shengbao Yang, Patiguli Aisimutuola, Baike Wang, Ning Li, Juan Wang, Qinghui Yu, published by Polish Society for Horticultural Sciences (PSHS)
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

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