Skip to main content

The local populations of the fungus Schizophyllum commune Fr. as drivers of its biodiversity Cover

.blurhash-client-img { display: none !important; }

The local populations of the fungus Schizophyllum commune Fr. as drivers of its biodiversity

Folia Forestalia Polonica

Volume 63 (2021): Issue 4 (December 2021)

By: Sergiy Boiko

Open Access

|Dec 2021

Figures & tables

Figures & Tables

The local populations of Schizophyllum commune (1 – Holosiivskyi National Nature Park, 2 – Lysa Hora Regional Landscape Park, 3 – Feofaniya forest parcel)

Table 1

Frequency of Schizophyllum commune alleles in studied populations and in total.

Locus	Allele	HNNP (1)	LHRLP (2)	Ffp (3)	Total
Eg2	Eg2¹⁰²	0.000	0.000	0.385	0.132
	Eg2¹⁰⁰	1.000	0.944	0.615	0.855
	Eg2⁹³	0.000	0.056	0.000	0.013
Amy2	Amy2¹¹⁰	0.156	0.111	0.000	0.092
	Amy2¹⁰⁷	0.000	0.056	0.115	0.053
	Amy2¹⁰⁰	0.813	0.667	0.846	0.789
	Amy2⁹⁵	0.031	0.167	0.038	0.066
Cat	Cat¹⁰⁷	0.000	0.000	0.077	0.026
	Cat¹⁰⁰	0.656	0.722	0.846	0.737
	Cat⁹⁷	0.188	0.222	0.038	0.145
	Cat⁸⁶	0.156	0.056	0.038	0.092
Got	Got¹⁰⁰	0.844	0.944	0.923	0.895
	Got⁸⁴	0.125	0.056	0.077	0.092
	Got^null	0.031	0.000	0.000	0.013

Table 2

Genetic variation of fungus Schizophyllum commune in local populations and in total

Local population	Locus	n	A	A_e	I	H_o	H_e	F
HNNP	Eg2	16	1.000	1.000	0.000	0.000	0.000	N/D
	Amy2	16	3.000	1.459	0.567	0.250	0.314	0.205
	Cat	16	3.000	2.040	0.880	0.313	0.510	0.387
	Got	16	3.000	1.373	0.512	0.250	0.271	0.079
	Average	16	2.500	1.468	0.490	0.203	0.274	0.224
LHRLP	Eg2	9	2.000	1.117	0.215	0.111	0.105	−0.059
	Amy2	9	4.000	2.051	0.974	0.556	0.512	−0.084
	Cat	9	3.000	1.742	0.730	0.222	0.426	0.478
	Got	9	2.000	1.117	0.215	0.111	0.105	−0.059
	Average	9	2.750	1.507	0.533	0.250	0.287	0.069
Ffp	Eg2	13	2.000	1.899	0.666	0.000	0.473	1.000
	Amy2	13	3.000	1.368	0.516	0.308	0.269	−0.143
	Cat	13	4.000	1.380	0.589	0.077	0.275	0.720
	Got	13	2.000	1.166	0.271	0.154	0.142	−0.083
	Average	13	2.750	1.453	0.511	0.135	0.290	0.374
Total		12.7	2.667	1.476	0.511	0.196	0.284	0.222

[i] A – average number of alleles per locus; A_e – effective number of alleles;

[ii] I – Shannon’s diversity index; observed (H_o) and expected (H_e) heterozygosity;

[iii] F – Wright’s fixation index.

Table 3

Parameters of Schizophyllum commune populations structure according to F-statistic

Locus	F_is	F_it	F_st	N_m
Eg2	0.808	0.855	0.244	0.773
Amy2	−0.016	0.028	0.043	5.546
Cat	0.495	0.515	0.039	6.091
Got	0.007	0.023	0.017	14.710
Average	0.323	0.355	0.086	6.780

The position of S. commune cultures from locations in the space of the first two principal coordinates

Table 4

Ewens-Watterson test on neutrality for S. commune loci

Locus	n	k	Obs. F	SE^*	L95^*	U95^*
Eg2	76	3	0.7490	0.0309	0.3653	0.9484
Amy2	76	4	0.6389	0.0278	0.3044	0.8985
Cat	76	4	0.5731	0.0277	0.3051	0.8985
Got	76	3	0.8092	0.0310	0.3653	0.9484

Obs. F – sum of squares of observed allele frequencies; SE – standard error; L95 and U95 – lower and upper limits of 95% confidence interval;

* denotes statistics calculated for 100000 simulations.

Correlograms of different S. commune loci

UPGMA dendrogram of the genetic similarity of cultures of S. commune (1–37 dikaryotic culture)

Topography of the landscape and repetition of the wind direction* in the explored territories
*Boris Sreznevsky Central Geophysical Observatory data for April–October 2016

Articles in this issue

DOI: https://doi.org/10.2478/ffp-2021-0031 | Journal eISSN: 2199-5907 | Journal ISSN: 0071-6677

Journal RSS Feed

Language: English

Page range: 308 - 316

Submitted on: Apr 7, 2021

|

Accepted on: Oct 2, 2021

|

Published on: Dec 11, 2021

Published by: Forest Research Institute

In partnership with: Paradigm Publishing Services

Keywords:

Schizophyllum commune,

genetic structure,

local populations,

Related subjects:

© 2021 Sergiy Boiko, published by Forest Research Institute
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.

Volume 63 (2021): Issue 4 (December 2021)

Previous article