References
- Ailizati, A., Nagahage, I. S. P., Miyagi, A., Ishikawa, T., Kawai-Yamada, M., Demura, T., & Yamaguchi, M. (2022). VND-INTERACTING2 effectively inhibits transcriptional activities of VASCULAR-RELATED NAC-DOMAIN7 through a conserved sequence. Plant Biotechnology, 39(2), 147–153. https://doi.org/10.5511/plantbiotechnology.22.0122a
- Allan, A. C. (2019). Domestication: Colour and flavour joined by a shared transcription factor. Current Biology, 29(2), R57–R59. https://doi.org/10.1016/j.cub.2018.12.005
- Alshareef, N. O., Otterbach, S. L., Allu, A. D., Woo, Y. H., de Werk, T., Kamranfar, I., Mueller-Roeber, B., Tester, M., Balazadeh, S., & Schmöckel, S. M. (2022). NAC transcription factors ATAF1 and ANAC055 affect the heat stress response in Arabidopsis. Scientific Reports, 12(1), 11264. https://doi.org/10.1038/s41598-022-14429-x
- Barco, B., & Clay, N. K. (2020). Hierarchical and dynamic regulation of defense-responsive specialized metabolism by WRKY and MYB transcription factors. Frontiers in Plant Science, 10, 1775. https://doi.org/10.3389/fpls.2019.01775
- Blanc-Mathieu, R., Dumas, R., Turchi, L., Lucas, J., & Parcy, F. (2024). Plant-TFClass: A structural classification for plant transcription factors. Trends in Plant Science, 29(1), 40–51. https://doi.org/10.1016/j.tplants.2023.06.023
- Brian, L., Warren, B., McAtee, P., Rodrigues, J., Nieuwenhuizen, N., Pasha, A., David, K. M., Richardson, A., Provart, N. J., Allan, A. C., Varkonyi-Gasic, E., & Schaffer, R. J. (2021). A gene expression atlas for kiwifruit (Actinidia chinensis) and network analysis of transcription factors. BMC Plant Biology, 21(1), 121. https://doi.org/10.1186/s12870-021-02894-x
- Butelli, E., Licciardello, C., Ramadugu, C., Durand-Hulak, M., Celant, A., Reforgiato Recupero, G., Froelicher, Y., & Martin, C. (2019). Noemi controls production of flavonoid pigments and fruit acidity and illustrates the domestication routes of modern citrus varieties. Current Biology, 29(1), 158–164.e2. https://doi.org/10.1016/j.cub.2018.11.040
- Chow, C. N., Yang, C. W., Wu, N. Y., Wang, H. T., Tseng, K. C., Chiu, Y. H., Lee, T. Y., & Chang, W. C. (2024). PlantPAN 4.0: updated database for identifying conserved non-coding sequences and exploring dynamic transcriptional regulation in plant promoters. Nucleic Acids Research, 52(D1), D1569–D1578. https://doi.org/10.1093/nar/gkad945
- Dang, X., Zhang, B., Li, C., & Nagawa, S. (2022). FvNST1b NAC protein induces secondary cell wall formation in strawberry. International Journal of Molecular Sciences, 23(21), 13212. https://doi.org/10.3390/ijms232113212
- Gong, X., Zhao, L-Y., Song, X-F., Lin, Z-K., Gu, B-J., Yan, J-X., Zhang, S-L., Tao, S-T., & Huang, X-S. (2019). Genome-wide analyses and expression patterns under abiotic stress of NAC transcription factors in white pear (Pyrus bretschneideri). BMC Plant Biology, 19(1), 161. https://doi.org/10.1186/s12870-019-1760-8
- Gray, J., Bevan, M., Brutnell, T., Buell, C. R., Cone, K., Hake, S., Jackson, D., Kellogg, E., Lawrence, C., McCouch, S., Mockler, T., Moose, S., Paterson, A., Peterson, T., Rokshar, D., Souza, G. M., Springer, N., Stein, N., Timmermans, M., Wang, G. L., & Grotewold, E. (2009). A recommendation for naming transcription factor proteins in the grasses. Plant Physiology, 149(1), 4–6. https://doi.org/10.1104/pp.108.128504
- Hartmann, A., Berkowitz, O., Whelan, J., & Narsai, R. (2022). Cross-species transcriptomic analyses reveals common and opposite responses in Arabidopsis, rice and barley following oxidative stress and hormone treatment. BMC Plant Biology, 22(1), 62. https://doi.org/10.1186/s12870-021-03406-7
- Hetz, C., Zhang, K. & Kaufman, R.J. (2020). Mechanisms, regulation and functions of the unfolded protein response. Nature Reviews Molecular Cell Biology, 21, 421–438. https://doi.org/10.1038/s41580-020-0250-z
- Hrmova, M., & Hussain, S.S. (2021). Plant transcription factors involved in drought and associated stresses. International Journal of Molecular Sciences, 22(11), 5662. https://doi.org/10.3390/ijms22115662
- Hu, X-L., Xie, F-F., Liang, W-W., Liang, Y-H., Zhang, Z-K., Zhao, J-T., Hu, G-B., & Qin, Y-H. (2022). HuNAC20 and HuNAC25, two novel NAC genes from pitaya, confer cold tolerance in transgenic Arabidopsis. International Journal of Molecular Sciences, 23(4), 2189. https://doi.org/10.3390/ijms23042189
- Jan, S. U., Jamil, M., Bhatti, M. F., & Gul, A. (2019). Hallmark attributes of plant transcription factors and potentials of WRKY, MYB and NAC in abiotic stresses. In: Hasanuzzaman, M., Nahar, K., Fujita, M., Oku, H., Tofazzal, M. I. (eds.) Approaches for Enhancing Abiotic Stress Tolerance in Plants, CRC Press, Boca Raton, pp. 441–458.
- Karppinen, K., Lafferty, D. J., Albert, N. W., Mikkola, N., McGhie, T., Allan, A. C., Afzal, B. M., Häggman, H., Espley, R. V., & Jaakola, L. (2021). MYBA and MYBPA transcription factors co-regulate anthocyanin biosynthesis in blue-coloured berries. New Phytologist, 232(3), 1350–1367. https://doi.org/10.1111/nph.17669
- Lai, X., Chahtane, H., Martin-Arevalillo, R., Zubieta, C., & Parcy, F. (2020). Contrasted evolutionary trajectories of plant transcription factors. Current Opinion in Plant Biology, 54, 101–107. https://doi.org/10.1016/j.pbi.2020.03.002
- Li, F., Shan, Y., Wang, H., Jiang, G., Ding, X., Liang, H., Wang, C., Kong, X., Xie, L., & Jiang, Y. (2023). A NAC transcriptional factor BrNAC029 is involved in cytokinin-delayed leaf senescence in postharvest Chinese flowering cabbage. Food Chemistry, 404(Pt B), 134657. https://doi.org/10.1016/j.foodchem.2022.134657
- Li, P-T., Chai, Z., Lin, P-P., Huang, C-H., Huang, G-Q., Xu, L-N., Deng, Z-H., Zhang, M-Q., Zhang, Y., & Zhao, X-W. (2020). Genome-wide identification and expression analysis of AP2/ERF transcription factors in sugarcane (Saccharum spontaneum L.). BMC Genomics, 21(1), 685. https://doi.org/10.1186/s12864-020-07076-x
- Li, Q., Zhou, L-Y., Li, Y-H., Zhang, D-P., & Gao, Y. (2021). Plant NIGT1/HRS1/HHO transcription factors: Key regulators with multiple roles in plant growth, development, and stress responses. International Journal of Molecular Sciences, 22(16), 8685. https://doi.org/10.3390/ijms22168685
- Li, X., Wang, Q., Guo, C., Sun, J., Li, Z., Wang, Y., Yang, A., Pu, W., Guo, Y., Gao, J., & Wen, L. (2022). NtNAC053, a novel NAC transcription factor, confers drought and salt tolerances in tobacco. Frontiers in Plant Science, 13, 817106. https://doi.org/10.3389/fpls.2022.817106
- Liu, X., Zong, X., Wu, X., Liu, H., Han, J., Yao, Z., Ren, Y., Ma, L., Wang, B., & Zhang, H. (2022). Ectopic expression of NAC transcription factor HaNAC3 from Haloxylon ammodendron increased abiotic stress resistance in tobacco. Planta, 256(6), 105. https://doi.org/10.1007/s00425-022-04021-y
- Ma, W-H., Kang, X., Liu, P., She, K-X., Zhang, Y-Y., Lin, X-R., Li, B., & Chen, Z-Z. (2022). The NAC-like transcription factor CsNAC7 positively regulates the caffeine biosynthesis-related gene yhNMT1 in Camellia sinensis. Horticulture Research, 9, uhab046. https://doi.org/10.1093/hr/uhab046
- Mao, H., Li, S-M., Chen, B., Jian, C., Mei, F-M., Zhang, Y-F., Li, F-F., Chen, N., Li, T., Du, L-Y., Ding, L., Wang, Z-X., Cheng, X-X., Wang, X-J., & Kang, Z-S. (2022). Variation in cis-regulation of a NAC transcription factor contributes to drought tolerance in wheat. Molecular Plant, 15(2), 276–292. https://doi.org/10.1016/j.molp.2021.11.007
- Meng, L., Yang, H., Xiang, L., Wang, Y., & Chan, Z. (2022). NAC transcription factor TgNAP promotes tulip petal senescence. Plant Physiology, 190(3), 1960–1977. https://doi.org/10.1093/plphys/kiac351
- Mijiti, M., Wang, Y., Wang, L., & Habuding, X. (2022). Tamarix hispida NAC transcription factor ThNAC4 [sic] confers salt and drought stress tolerance to transgenic Tamarix and Arabidopsis. Plants, 11(19), 2647. https://doi.org/10.3390/plants11192647
- Ng, D.W.-K., Abeysinghe, J.K., & Kamali, M. (2018). Regulating the regulators: The control of transcription factors in plant defense signaling. International Journal of Molecular Sciences, 19(12), 3737. https://doi.org/10.3390/ijms19123737
- Niu, X-L., & Fu, D-Q. (2022). The Roles of BLH transcription factors in plant development and environmental response. International Journal of Molecular Sciences, 23(7), 3731. https://doi.org/10.3390/ijms23073731
- Peng, H., Phung, J., Stowe, E. C., Dhingra, A., & Neff, M. M. (2022). The NAC transcription factor ATAF2 promotes ethylene biosynthesis and response in Arabidopsis thaliana seedlings. FEBS Letters, 596(12), 1586–1599. https://doi.org/10.1002/1873-3468.14317
- PlantRegMap (2024). PlantRegMap/PlantTFDB v5.0. Plant Transcription Factor Database. http://planttfdb.gaolab.org/help_famschema.php (last accessed: 25 July 2024)
- PubMed (2024). Plants NAC. https://pubmed.ncbi.nlm.nih.gov/?term=plants+NAC (last access: 25 July 2024)
- Romani, F., & Moreno, J. E. (2021). Molecular mechanisms involved in functional macroevolution of plant transcription factors. New Phytologist, 230(4), 1345–1353. https://doi.org/10.1111/nph.17161
- Roy, D., & Sadanandom, A. (2021). SUMO mediated regulation of transcription factors as a mechanism for transducing environmental cues into cellular signaling in plants. Cellular and Molecular Life Sciences, 78(6), 2641–2664. https://doi.org/10.1007/s00018-020-03723-4
- Salaün, C., Lepiniec, L., & Dubreucq, B. (2021). Genetic and molecular control of somatic embryogenesis. Plants, 10(7), 1467. https://doi.org/10.3390/plants10071467
- Tao, Y., Wan, J. X., Liu, Y. S., Yang, X. Z., Shen, R. F., & Zhu, X. F. (2022). The NAC transcription factor ANAC017 regulates aluminum tolerance by regulating the cell wall-modifying genes. Plant Physiology, 189(4), 2517–2534. https://doi.org/10.1093/plphys/kiac197
- Teixeira da Silva, J. A. (2016a). In defense of the use of italic for Latin binomial plant names. Polish Botanical Journal, 61(1), 1–6. https://doi.org/10.1515/pbj-2016-0014
- Teixeira da Silva, J. A. (2016b). An error is an error… is an erratum. The ethics of not correcting errors in the science literature. Publishing Research Quarterly, 32(3), 220–226. https://doi.org/10.1007/s12109-016-9469-0
- Teixeira da Silva, J. A. (2020). Chinese names in the biomedical literature: Suggested bibliometric standardization. Publishing Research Quarterly, 36(2), 254–257. https://doi.org/10.1007/s12109-020-09725-1
- Teixeira da Silva, J. A. (2023). Is the validity, credibility and reliability of literature indexed in PubMed at risk? Medical Journal Armed Forces India, 79(5), 601–602. https://doi.org/10.1016/j.mjafi.2021.03.009
- Teixeira da Silva, J. A. (2022). A synthesis of the formats for correcting erroneous and fraudulent academic literature, and associated challenges. Journal for General Philosophy of Science, 53(4), 583–599. https://doi.org/10.1007/s10838-022-09607-4
- Teixeira da Silva, J. A., Bornemann-Cimenti, H., Daly, T., & Türp, J. C. (2024). Beyond disclaimers: The need for a curation-based model of PubMed. Current Medical Research & Opinion, 40(6), 1039–1045. https://doi.org/10.1080/03007995.2024.2350612
- Teixeira da Silva, J. A., & Nazarovets, S. (2022). Publication history: A double DOI-based method to store and/or monitor information about published and corrected academic literature. Journal of Scholarly Publishing, 53(2), 85–108. https://doi.org/10.3138/jsp.53.2.2017-0017
- Tian, F., Yang, D-C., Meng, Y-Q., Jin, J-P., & Gao, G. (2020). PlantRegMap: Charting functional regulatory maps in plants. Nucleic Acids Research, 48(D1), D1104–D1113. https://doi.org/10.1093/nar/gkz1020
- Valoroso, M. C., Lucibelli, F., & Aceto, S. (2022). Orchid NAC transcription factors: A focused analysis of CUPULIFORMIS genes. Genes, 13(12), 2293. https://doi.org/10.3390/genes13122293
- Vargas-Hernández, B. Y., Núñez-Muñoz, L., Calderón-Pérez, B., Xoconostle-Cázares, B., & Ruiz-Medrano, R. (2022). The NAC transcription factor ANAC087 [sic] induces aerial rosette development and leaf senescence in Arabidopsis. Frontiers in Plant Science, 13, 818107. https://doi.org/10.3389/fpls.2022.818107
- Wang, M., Ren, L. T., Wei, X. Y., Ling, Y. M., Gu, H. T., Wang, S. S., Ma, X. F., & Kong, G. C. (2022). NAC transcription factor TwNAC01 [sic] positively regulates drought stress responses in Arabidopsis and Triticale. Frontiers in Plant Science, 13, 877016. https://doi.org/10.3389/fpls.2022.877016
- Wang, P-T., Xu, X., Tang, Z., Zhang, W-W., Huang, X-Y., & Zhao, F-J. (2018). OsWRKY28 regulates phosphate and arsenate accumulation, root system architecture and fertility in rice. Frontiers in Plant Science, 9, 1330. https://doi.org/10.3389/fpls.2018.01330
- Wang, X-P., Niu, Y-L., & Zheng, Y. (2021). Multiple functions of MYB transcription factors in abiotic stress responses. International Journal of Molecular Sciences, 22(11), 6125. https://doi.org/10.3390/ijms22116125
- Wang, Y., Cui, Y., Liu, B., Wang, Y., Sun, S., Wang, J., Tan, M., Yan, H., & Zhang, Y. (2022). Lilium pumilum stress-responsive NAC transcription factor LpNAC17 [sic] enhances salt stress tolerance in tobacco. Frontiers in Plant Science, 13, 993841. https://doi.org/10.3389/fpls.2022.993841
- Wani, S. H., Anand, S., Singh, B., Bohra, A., & Joshi, R. (2021). WRKY transcription factors and plant defense responses: Latest discoveries and future prospects. Plant Cell Reports, 40(7), 1071–1085. https://doi.org/10.1007/s00299-021-02691-8
- Xiao, R-X., Zhang, C., Guo, X-R., Li, H., & Lu, H. (2021). MYB transcription factors and its regulation in secondary cell wall formation and lignin biosynthesis during xylem development. International Journal of Molecular Sciences, 22(7), 3560. https://doi.org/10.3390/ijms22073560
- Xu, P-P., Ma, W., Hu, J-B., & Cai, W-M. (2022). The nitrateinducible NAC transcription factor NAC056 controls nitrate assimilation and promotes lateral root growth in Arabidopsis thaliana. PLoS Genetics, 18(3), e1010090. https://doi.org/10.1371/journal.pgen.1010090
- Yang, C., Huang, Y., Lv, P., Antwi-Boasiako, A., Begum, N., Zhao, T., & Zhao, J. (2022). NAC transcription factor GmNAC12 [sic] improved drought stress tolerance in soybean. International Journal of Molecular Sciences, 23(19), 12029. https://doi.org/10.3390/ijms231912029
- Yang, Y-H., Liu, X., Zhang, W-B., Qian, Q., Zhou, L-M., Liu, S., Li, Y-G., & Hou, X-L. (2021). Stress response proteins NRP1 and NRP2 are pro-survival factors that inhibit cell death during ER stress. Plant Physiology, 187(3), 1414–1427. https://doi.org/10.1093/plphys/kiab335
- Yoon, Y-D., Seo, D-H., Shin, H-Y., Kim, H-J., Kim, C-M., & Jang, G-P. (2020). The role of stress-responsive transcription factors in modulating abiotic stress tolerance in plants. Agronomy, 10(6), 788. https://doi.org/10.3390/agronomy10060788
- Yu, C-Y., Cho, Y., Sharma, O., & Kanehara, K. (2022). What’s unique? The unfolded protein response in plants. Journal of Experimental Botany, 73(5), 1268–1276. https://doi.org/10.1093/jxb/erab513
- Yu, G., Xie, Z., Lei, S., Li, H., Xu, B., & Huang, B. (2022). The NAC factor LpNAL delays leaf senescence by repressing two chlorophyll catabolic genes in perennial ryegrass. Plant Physiology, 189(2), 595–610. https://doi.org/10.1093/plphys/kiac070
- Zhang, J-C., Mei, H., Lu, H-J., Chen, R., Hu, Y., & Zhang, T-Z. (2022). Transcriptome time-course analysis in the whole period of cotton fiber development. Frontiers in Plant Science, 13, 864529. https://doi.org/10.3389/fpls.2022.864529
- Zhang, X., Li, L., Lang, Z., Li, D., He, Y., Zhao, Y., Tao, H., Wei, J., Li, Q., & Hong, G. (2022). Genome-wide characterization of NAC transcription factors in Camellia sinensis and the involvement of CsNAC28 in drought tolerance. Frontiers in Plant Science, 13, 1065261. https://doi.org/10.3389/fpls.2022.1065261