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Association of VDR gene variant (rs1544410) with type 2 diabetes in a Pakistani cohort Cover

Association of VDR gene variant (rs1544410) with type 2 diabetes in a Pakistani cohort

By: A Khan,  S Khan,  A Aman,  Y Ali,  M Jamal,  B Rahman,  M Ahmad,  M Aasim,  F Jalil and  AA Shah  
Open Access
|Dec 2019

Figures & Tables

Figure 1

Representative gel pictures depicting genotypes in T2DM cases (A) and controls (B), and controls (C).
Representative gel pictures depicting genotypes in T2DM cases (A) and controls (B), and controls (C).

Upper and lower ranges and mean values of different variables in cases and controls_

CategoryAge in Years (mean/range)BMI (kg/m2) (mean/range)RBS/FBS (mg/dL) (mean/range)Hb A1c (%) (age mean)
T1DM (males)40.0 (5-67)22.3 (12.7-32.2)196.7 (122.0-384.0)9.4 (6.8-15.5)
T1DM (females)43.1 (15-62)24.6 (16.0-37.2)219.1 (8161.0-402.0)9.6 (7.3-12.1)
T2DM (males)57.4 (32.0-100.0)23.4 (13.5-39.8)245.0 (135-510.0)9.6 (6.7-13.7)
T2DM (females)5.5 (29.0-91.0)22.1 (12.3-37.3)?269.7 (144.0-510.0)9.8 (6.9-12.7)
Controls44.0 (10.0-100.0)21.2 (14.5-33.7)112.3 (70.0-168.0)

Genotype and allele frequencies VDR gene SNP (rs1544410) using codominant, additive, homozygous dominant, homozygous recessive models_

Statistical ModelGenotypeCases (n=250) (%)Controls (n=250) (%)χ2 (df=2)OR (95% CI)RR (95% CI)p Value
Genotype Frequency/ Codominant ModelAA65 (26.0)32 (12.8)41.810.0001
AG69 (27.6)139 (55.6)
GG116 (46.4)79 (31.56)
Homozygous Dominant ModelGG116 (46.4)79 (31.6)2.9701.798<0.0001
AG+AA134 (28.6)271 (68.3)(2.086-4.227)(1.501-2.154)
Homozygous Recessive ModelAA65 (26.0)32 (12.8)2.3941.4600.003
AG+GG185 (74.0%218 (87.2)(1501-3.816)(1.225-1.740)
Language: English
Page range: 59 - 64
Published on: Dec 21, 2019
In partnership with: Paradigm Publishing Services
Publication frequency: 2 issues per year

© 2019 A Khan, S Khan, A Aman, Y Ali, M Jamal, B Rahman, M Ahmad, M Aasim, F Jalil, AA Shah, published by Macedonian Academy of Sciences and Arts
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 3.0 License.