References
- Adamczewski T., Chróst R.J., Kalinowska K., Skowrońska A. 2010 – Relationships between bacteria and heterotrophic nanoflagellates in lake water examined by different techniques controlling grazing pressure – Aquat. Microb. Ecol. 60: 203-213.10.3354/ame01420
- Ammerman J.W., Fuhrman J.A., Hagström Ĺ., Azam F. 1984 – Bacterioplankton growth in seawater: I. Growth kinetics and cellular characteristics in seawater cultures – Mar. Ecol. Prog. Ser. 18: 31-39.10.3354/meps018031
- Arrar E.J., Collins G.B. 1997 – Method 445.0. In vitro determination of chlorophyll a and phenophytin a in marine and freshwater algae by fluorescence. National Exposure Research Laboratory – Office of Research and Development. U.S. Environmental Protection Agency.
- Badalucco L., Pomare F., Grego S., Landi L., Nannipieri P. 1994 – Activity and degradation of streptomycin and cycloheximide in soil – Biol. Fertil. Soils 18: 334-340.10.1007/BF00570637
- Carlson R.E. 1977 – A trophic state index for lakes – Limnol. Oceanogr. 22: 361-369.10.4319/lo.1977.22.2.0361
- Carrias J.-F., Amblard C., Bourdier G. 1996 – Protistan bacterivory in an oligomesotrophic lake: importance of attached ciliates and flagellates – Microb. Ecol. 31: 249-268.10.1007/BF001715708661531
- Chabaud S., Andres Y., Lakel A., Le Cloirec P. 2006 – Bacteria removal in septic effluent: influence of biofilm and protozoa – Water Res. 40: 3109-3114.10.1016/j.watres.2006.06.00816899272
- Chróst R.J., Overbeck J., Wcisło R. 1988 – [3H] thymidine method for estimating bacterial growth rates and production in lake water: re-examination and methodological comments – Acta Microbiol. Pol. 37: 95-112.
- Cimbleris A.C.P., Kalff J. 2003 – Volumetric and aerial rates of heterotrophic bacterial production in epi- and hypolimnia: the role of nutrients and system morphometry – Hydrobiologia 500: 193-202.10.1007/978-94-007-1084-9_13
- Comte J., Jacquet S., Viboud S., Fontvieille D., Millery A., Paolini G., Domaizon I. 2006 – Microbial community structure and dynamics in the largest natural French lake (Lake Bourget) – Microb. Ecol. 52: 72-89.10.1007/s00248-004-0230-416733620
- DeLorenzo M.E., Lewitus A.J., Scott G.I., Ross P.E. 2001 – Use of metabolic inhibitors to characterize ecological interactions in an estuarine microbial food web – Microb. Ecol. 42: 317-327.10.1007/s00248-001-0004-112024257
- Foissner W., Berger H., Schaumburg J. 1999 – Identification and ecology of limnetic plankton ciliates – Informationsberichte des Bayer, Landesamt für Wasserwirtschaft, München, 793p.
- Hahn M.W., Höfle M.G. 2001 – Grazing of protozoa and its effect on populations of aquatic bacteria – FEMS Microbiol. Ecol. 35: 113-121.10.1111/j.1574-6941.2001.tb00794.x11295449
- Hitchman R.B., Jones H.L.J. 2000 – The role of mixotrophic protists in the population dynamics of the microbial food web in a small artificial ponds – Freshwater Biol. 43: 231-241.10.1046/j.1365-2427.2000.00541.x
- Jezbera J., Horňák K., Šimek K. 2006 – Prey selectivity of bacterivorous protists in different size fractions of reservoir water amended with nutrients – Environ. Microbiol. 8: 1330-1339.10.1111/j.1462-2920.2006.01026.x
- Kalinowska K., Napiórkowska-Krzebietke A., Bogacka-Kapusta E., Hutorowicz J., Pyka J., Stawecki K., Kapusta A., Chybowski Ł. 2017 – Microbial and classic food web components under ice cover in eutrophic lakes of different morphometry and fisheries management – Oceanol. Hydrobiol. St. 46: 271-282.10.1515/ohs-2017-0029
- Koroleff F. 1983 – Determination of phosphorus. Chemistry of the element in seawater – In: Methods of seawater analysis (Eds) K. Grasshoff, M. Erhardt, K. Kremling, Verlag Chemie, Weinheim: 125-139.
- Kota S., Borden R.C., Barlaz M.A. 1999 – Influence of protozoan grazing on contaminant biodegradation – FEMS Microbiol. Ecol. 29: 179-189.10.1111/j.1574-6941.1999.tb00609.x
- McCambridge J., McMeekin T.A. 1980 – Relative effects of bacterial and protozoan predators on survival of Escherichia coli in estuarine water samples – Appl. Environ. Microbiol. 40: 907-911.10.1128/aem.40.5.907-911.1980
- Müller H., Schlegel A. 1999 – Responses of three freshwater planktonic ciliates with different feeding modes to cryptophyte and diatom prey – Aquat. Microb. Ecol. 17: 49-60.10.3354/ame017049
- Newell S.Y., Sherr B.F., Sherr E.B., Fallon R.D. 1983 – Bacterial response to presence of eukaryote inhibitors in water from a coastal marine environment – Mar. Environ. Res. 10: 147-157.10.1016/0141-1136(83)90007-7
- Pang M., Lin X., Liu J., Guo C., Gao S., Du H., Lu C., Liu J. 2016 – Identification of Aeromonas hydrophila genes preferentially expressed after phagocytosis by Tetrahymena and involvement of methionine sulfoxide reductases – Front. Cell. Infect. Microbiol. 6: 199-211.10.3389/fcimb.2016.00199518398828083518
- Pernthaler J. 2005 – Predation on prokaryotes in the water column and its ecological implications – Nat. Rev. Microbiol. 3: 537-546.10.1038/nrmicro118015953930
- Porter K.G., Feig Y.S. 1980 – The use of DAPI for identifying and counting aquatic microflora – Limnol. Oceanogr. 25: 943-948.10.4319/lo.1980.25.5.0943
- Post D.M., Pace M.L., Hairston N.G. 2000 – Ecosystem size determines food-chain length in lakes – Nature 405: 1047-1049.10.1038/3501656510890443
- Psenner R. 1993 – Determination of size and morphology of aquatic bacteria by automated image analysis – In: Handbook of methods in aquatic microbial ecology (Eds) P.F. Kemp, B.F. Sherr, E.B. Sherr, J.J. Cole, CRC Press, Boca Raton, FL: 339-345.
- Sanders R.W., Porter K.G. 1986 – Use of metabolic inhibitors to estimate protozooplankton grazing and bacterial production in a monomictic eutrophic lake with an anaerobic hypolimnion – Appl. Environ. Microbiol. 52: 101-107.10.1128/aem.52.1.101-107.198620340116347096
- Sanders R.W., Porter K.G., Bennett S.J., DeBiase A.E. 1989 – Seasonal patterns of bacterivory by flagellates, ciliates, rotifers, and cladocerans in a freshwater planktonic community – Limnol. Oceanogr. 34: 673-687.
- Sherr B.F., Sherr E.B., Andrew T.L., Fallon R.D., Newell S.Y. 1986 – Trophic interactions between heterotrophic Protozoa and bacterioplankton in estuarine water analyzed with selective metabolic inhibitors – Mar. Ecol. Prog. Ser. 32: 169-179.10.3354/meps032169
- Shimeta J., Cook P.L.M. 2011 – Testing assumptions of the eukaryotic inhibitor method for investigating interactions between aquatic protozoa and bacteria, applied to marine sediments – Limnol. Oceanogr.: Methods 9: 288-295.
- Šimek K., Grujčić V., Hahn M.W., Horòák K., Jezl J., Kasalický V., Nedoma J., Salcher M.M.., Shabarova T. 2018 – Bacterial prey food characteristics modulate community growth response of freshwater bacterivorous flagellates – Limnol. Oceanogr. 63: 484-502.10.1002/lno.10759
- Šimek K., Horňák K., Jezbera J., Masin M., Nedoma J., Gasol J.M., Schauer M. 2005 – Influence of top-down and bottom-up manipulations on the R-BT065 subcluster of β-Proteobacteria, an abundant group in bacterioplankton of a freshwater reservoir – Appl. Environ. Microbiol. 71: 2381-2390.
- Šimek K., Horňák K., Jezbera J., Nedoma J., Vrba J., Straškrábová V., Macek M., Dolan J.R., Hahn M. 2006 – Maximum growth rates and possible life strategies of different bacterioplankton groups in relation to phosphorus availability in a freshwater reservoir – Environ. Microbiol. 8: 1613-1624.10.1111/j.1462-2920.2006.01053.x16913921
- Šimek K., Jezbera J., Horňák K., Vrba J., Seda J. 2004 – Role of diatom-attached choanoflagellates of the genus Salpinogoeca as pelagic bacterivores – Aquat. Microb. Ecol. 36: 257-269.10.3354/ame036257
- Šimek K., Jürgens K., Nedoma J., Comerma M., Armengol J. 2000 – Ecological role and bacterial grazing of Halteria spp.: small freshwater oligotrichs as dominant pelagic ciliate bacterivores – Aquat. Microb. Ecol. 22: 43-56.10.3354/ame022043
- Smith A.W. 2010 – Protozoa and pathogenic bacteria; lessons learned from Legionella pneumophila – J. Eukaryot. Microbiol. 52: 27S-28S.10.1111/j.1550-7408.2005.05202003_2_4.x
- Sonntag B., Posch T., Klammer S., Teubner K., Psenner R. 2006 – Phagotrophic ciliates and flagellates in an oligotrophic, deep, alpine lake: contrasting variability with seasons and depths – Aquat. Microb. Ecol. 43: 193-207.
- Suhama M., Hanson E.D. 1971 – The role of protein synthesis in prefission morphogenesis of Paramecium aurelia – J. Exp. Zool. 177: 463-468.10.1002/jez.14017704085130028
- Taylor G.T., Pace M.L. 1987 – Validity of eucaryote inhibitors for assessing production and grazing mortality of marine bacterioplankton – Appl. Environ. Microbiol. 53: 119-128.10.1128/aem.53.1.119-128.198720361416347253
- Tremaine S.C., Mills A.L. 1987 – Inadequacy of the eucaryote inhibitor cycloheximide in studies of protozoan grazing on bacteria at the freshwater-sediment interface – Appl. Environ. Microbiol. 53: 1969-1972.10.1128/aem.53.8.1969-1972.198720403716347423
- Wcisło R., Chróst R.J. 2000 – Survival of Escherichia coli in freshwater – Pol. J. Environ. Studies 9: 215-222.
- Weisse T. 1990 – Trophic interactions among heterotrophic microplankton, nanoplankton, and bacteria in Lake Constance – Hydrobiologia 191: 111-122.
- Weithoff G., Moser M., Kamjunke N., Gaedke U., Weisse T. 2010 – Lake morphometry and wind exposure may shape the plankton community structure in acidic mining lakes – Limnologica 40: 161-166.10.1016/j.limno.2009.11.002351257523225914
- Zingel P., Ott I. 2000 – Vertical distribution of planktonic ciliates in strongly stratified temperate lake – Hydrobiologia 435: 19-26.10.1023/A:1004021103681