References
- 1. Nielsen D, Utrankar A, Reyes J et al. Epigenetics of drug abuse: Predisposition or response. Pharmacogenomics, 2012, 13, 1149-1160.
- 2. Bird A. Perceptions of epigenetics. Nature, 2007, 447(7143), 396-398.
- 3. Klose RJ, Bird AP. Genomic DNA methylation: the mark and its mediators. Trends Biochem Sci, 2006, 31(2), 89-97.
- 4. Lyko F. The DNA methyltransferase family: a versatile toolkit for epigenetic regulation. Nat Rev Genet, 2018, 19(2), 81-92.
- 5. Du Q, Luu PL, Stirzaker C, Clark SJ. Methyl-CpG-binding domain proteins: readers of the epigenome. Epigenomics, 2015, 7(6), 1051-1073.
- 6. Houston I, Peter CJ, Mitchell A et al. Epigenetics in the human brain. Neuropsychopharm, 2013, 38, 183-197.
- 7. Grayson DR, Guidotti A. The dynamics of DNA methylation in schizophrenia and related psychiatricdisorders. Neuropsychopharm, 2013, 38, 138-166.
- 8. Guidotti A, Auta J, Chen Y et al. Epigenetic GABAergic targets in schizophrenia and bipolar disorder. Neuropharm, 2011, 60, 1007-1016.
- 9. Mill J, Tang T, Kaminsky Z et al. Epigenomic profiling reveals DNA-methylation changes associated with major psychosis. Am J Hum Genet, 2008, 82, 696-711.
- 10. Lister R, Mukamel EA. Turning over DNA methylation in the mind. Front Neurosci, 2015, 9, 252.
- 11. Garro AJ, McBeth DL, Lima V, Lieber CS. Ethanol consumption inhibits fetal DNA methylation in mice: implications for the Fetal Alcohol Syndrome. Alcohol Clin Exp Res, 1991, 15, 395-398.
- 12. Ponomarev I, Wang S, Zhang L et al. Gene coexpression networks in human brain identify epigenetic modifications in alcohol dependence. J Neurosci, 2012, 32, 1884-1897.
- 13. Shukla SD, Velazquez J, French SW et al Emerging role of epigenetics in the actions of alcohol. Alcoholism: Clin Exp Res, 2008, 32(9), 1525-1534.
- 14. Bonsch D, Lenz B, Reulbach U et al. Homocysteine associated genomic DNA hypermethylation in patients with chronic alcoholism. J Neural Transm, 2004, 111, 1611-1616.
- 15. Manzardo AM, Henkhaus RS, Butler MG. Global DNA promoter methylation in frontal cortex of alcoholics and controls. Gene, 2012, 498(1), 5-12.
- 16. Auta J, Smith RC, Donga E et al. DNA-methylation gene network dysregulation in peripheral blood lymphocytes of schizophrenia patients. Schizophrenia Res, 2013, 150, 312-318.
- 17. Kala R, Shah HN, Martin SL, Tollefsbol TO. Epigenetic-based combinatorial resveratrol and pterostilbene alters DNA damage response by affecting SIRT1 and DNMT enzyme expression, including SIRT1-dependent γ-H2AX and telomerase regulation in triple-negative breast cancer. BMC Cancer, 2015, 15, 672.
- 18. Müller C, Readhead C, Diederichs et al. Methylation of the cyclin A1 promoter correlates with gene silencing in somatic cell lines, while tissue-specific expression of cyclin A1 is methylation independent. Mol Cell Biol, 2000, 3316-3329.
- 19. Pfaffl MW. A new mathematical model for relative quantification in real-time RT–PCR. Nucleic Acids Res, 2001, 29(9), e45.
- 20. Moore LD, Le T, Fan G. DNA methylation and its basic function. Neuropsychopharmacology Reviews, 2013, 38, 23-38.
- 21. Baubec T, Ivánek R, Lienert F, Schübeler D. Methylation-dependent and – independent genomic targeting principles of the MBD protein family. Cell, 2013, 53(2), 480-492.
- 22. Vertino PM, Yen RW, Gao J, Baylin SB. De novo methylation of CpG island sequences in human fibroblasts overexpressing DNA (cytosine-5-)-methyltransferase. Mol Cell Biol, 1996; 16(8), 4555-4565.
- 23. Bielawski DM, Zaher FM, Svinarich DM, Abel EL. Paternal alcohol exposure affects sperm cytosine methyltransferase messenger RNA levels. Alcohol Clin Exp Res, 2002, 26, 347-351.
- 24. Warnault ED, Levine A, Barak S, Ron D. Chromatin remodeling - a novel strategy to control excessive alcohol drinking. Transl Psychiatry, 2013, 3, e231.
- 25. Jones PA, Liang G. Rethinking how DNA methylation patterns are maintained. Nat Rev Genet, 2009, 10, 805-811.
- 26. Miozzo F, Arnould H, De Thonel A et al. Alcohol exposure promotes DNA methyltransferase DNMT3a upregulation through reactive oxygen species-dependent mechanisms. Cell Stress Chaperones, 2018, 23, 115–126.
- 27. Bönsch D, Lenz B, Fiszer R et al. Lowered DNA methyltransferase (DNMT-3b) mRNA expression is associated with genomic DNA hypermethylation in patients with chronic alcoholism. J Neural Transm, 2006, 113(9), 1299-1304.
- 28. Zhang X, Kusumo H, Sakharkar AJ et al. Regulation of DNA methylation by ethanol induces tissue plasminogen activator expression in astrocytes. J Neurochem, 2014, 128(3), 344-349.
- 29. LaPlant Q, Vialou V, Covington HE 3rd, et al. DNMT3a regulates emotional behavior and spine plasticity in the nucleus accumbens. Nat Neurosci, 2010, 13(9), 1137-1143.
- 30. Im HI, Hollander JA, Bali P, Kenny PJ. MeCP2 controls BDNF expression and cocaine intake through homeostatic interactions with microRNA-212. Nat Neurosci, 2010, 13(9), 1120-1127.
- 31. Cotto B, Li H, Tuma RF, Ward SJ, Langford D. Cocaine-mediated activation of microglia and microglial MeCP2 and BDNF production. Neurobiol Dis, 2018, 117, 28-41.
- 32. Deng JV, Rodriguiz RM, Hutchinson AN et al. MeCP2 in the nucleus accumbens contributes to neural and behavioral responses to psychostimulants. Nat Neurosci, 2010, 13(9), 1128-1136.
- 33. Allan AM, Liang X, Luo Y, et al. The loss of methyl-CpG binding protein 1 leads to autism-like behavioral deficits. Hum Mol Genet, 2008, 17(13), 2047-2057.
- 34. Li H, Yamagata T, Mori M, Yasuhara A, Momoi MY. Mutation analysis of methyl-CpG binding protein family genes in autistic patients. Brain Dev, 2005, 27(5), 321-325.
- 35. Cassel S, Carouge D, Gensburger C, et al. Fluoxetine and cocaine induce the epigenetic factors MeCP2 and MBD1 in adult rat brain. Mol Pharmacol, 2006, 70(2), 487-492.
- 36. Pan H, Bilinovich SM, Kaur P et al. CpG and methylation-dependent DNA binding and dynamics of the methylcytosine binding domain 2 protein at the single-molecule level. Nucleic Acids Res, 2017, 45, 9164–9177.
- 37. Zhou Z, Yuan Q, Mash DC, Goldman D. Substance-specific and shared transcription and epigenetic changes in the human hippocampus chronically exposed to cocaine and alcohol. Proc Natl Acad Sci U S A, 2011, 108, 6626–6631.
- 38. Liu J, Lewohl JM, Harris RA et al. Patterns of gene expression in the frontal cortex discriminate alcoholic from nonalcoholic individuals. Neuropsychopharmacology: Official Publication of the American College of Neuropsychopharmacology, 2006, 31(7), 1574-1582.
- 39. Laget S, Miotto B, Chin HG et al. MBD4 cooperates with DNMT1 to mediate methyl-DNA repression and protects mammalian cells from oxidative stress. Epigenetics, 2014, 9(4), 546-556.
- 40. Wang S, Li Y, Zhu F et al. DNMT1 cooperates with MBD4 to inhibit the expression of Glucocorticoid-induced TNFR-related protein in human T cells. FEBS Lett, 2017, 591(13), 1929-1939.
- 41. Guidotti A., Dong E., Gavin D et al. DNA Methylation/Demethylation Network Expression in Psychotic Patients with a History of Alcohol Abuse. Alcoholism, clinical and experimental research, 2012, 37.
- 42. Knothe C, Doehring A, Ultsch A, Lötsch J. Methadone induces hypermethylation of human DNA. Epigenomics, 2016, 8(2), 167-179.