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Microbiology and Drug Resistance of Pathogens in Patients Hospitalized at the Nephrology Department in the South of Poland Cover

Microbiology and Drug Resistance of Pathogens in Patients Hospitalized at the Nephrology Department in the South of Poland

Open Access
|Dec 2018

Figures & Tables

Table I

Characteristic of patients with UTI enrolled in the study.

CharacteristicTotal UTI n = 498 (100%)CAUTI n = 60 (100%)non-CAUTI n = 438 (100%)OR (95% CI)p-value
n%n%n%
Gender:Male17935.9%3761.7%14232.4%3.35 (1.92–5.86)< 0.001
Female31964.1%2338.3%29667.6%0.30 (0.17–0.52)< 0.001
Hypertension26352.8%3761.7%22651.6%1.51 (0.87–2.62)0.145
Heart failure17434.9%2338.3%14132.2%1.31 (0.75–2.29)0.344
Diabetes mellitus19038.2%1830.0%17239.3%0.72 (0.40–1.28)0.258
Urolithiasis224.4%11.7%214.8%0.34 (0.04–2.55)0.292
Bronchopneumonia91.8%11.7%81.8%0.91 (0.11–7.41)0.931
Malignancy (total)8016.1%1118.3%6915.8%1.34 (0.68–2.65)0.405
Genitourinary malignancy418.2%915.0%327.3%2.24 (1.01–4.96)0.047
Prostatic hyperplasia5711.4%1016.7%4710.7%1.66 (0.79–3.50)0.180
Urine stasis in kidneys234.6%58.3%184.1%4.34 (1.76–10.73)0.001
Percutaneous nephrostomy81.6%11.7%71.6 %1.04 (0.13–8.63)0.968
Hemodialysis204.0%23.3%184.1%0.80 (0.18–3.56)0.774
Immunotherapy265.2%46.7%225.0%1.35 (0.45–4.06)0.593

1 Data are expressed as number and percentage.

2 One patient may have several co-existing diseases

Table II

Microbial uropathogens isolated from the urine samples.

PathogenTotal UTICAUTInon-CAUTIOR (95% CI)p-value
n%n%n%
E. coli36372.9%3761.7%32674.4%0.55 (0.31–0.97)0.039
Proteus sp.306.0%610.0%245.5%1.92 (0.75–4.90)0.174
Staphylococcus sp.122.4%58.3%71.6%5.60 (1.72–18.24)0.004
Enterobacter sp.204.0%46.7%163.7%1.88 (0.61–5.84)0.272
Klebsiella sp.408.0%23.3%388.7%0.36 (0.09–1.54)0.170
Enterococcus sp.112.2%23.3%92.0%1.64 (0.35–7.80)0.532
Other224.4%46.7%184.1%1.67 (0.54–5.10)0.371
Total498100.0%60100.0%438100.0%

1 Other pathogens:

2 Pseudonomas sp. (n = 6), Morganella morganii (n = 4), Acinetobacter baumanii (n = 3), Serratia sp. (n = 3), Citrobacter sp. (n = 2), Raoultella planticola (n = 1), Salmonella (n = 1), Stenotrophomonas maltophilia (n = 1), Streptococcus agalactiae (n = 1) ESBL-producing pathogens responsible for CAUTI: E. coli (n = 6), Klebsiella sp. (n = 2), Enterobacter sp. (n = 1) ESBL-producing pathogens responsible for non-CAUTI: E. coli (n = 23), Klebsiella sp. (n = 12), Enterobacter sp. (n = 11), Proteus sp. (n = 4)

Table III

Susceptibility profile of E. coli isolates studied to various antimicrobial agents.

AntibioticsTotal UTI (n = 363)CAUTI (n = 37)non-CAUTI (n = 326)OR (95% CI)p-value
n’% susc.n’% susc.n’% susc.
Beta-lactam antibacterials, penicylinns
Ampicillin35430.2%3619.4%31831.4%0.53 (0.22–1.24)0.143
AM/CL36149.9%3743.2%32450.6%0.74 (0.37–1.48)0.397
PIP/TZ20787.0%1968.4%18888.8%0.27 (0.09–0.79)0.017
Aminoglycosides
Amikacin21188.2%1861.1%19390.7%0.16 (0.06–0.47)0.001
Gentamicin21191.0%2070.0%19193.2%0.17 (0.06–0.52)0.002
Cephalosporins
Cefalexin19779.7%1741.2%18083.3%0.14 (0.05–0.40)< 0.001
Cefuroxime35885.8%3675.0%32287.0%0.45 (0.20–1.02)0.057
Cefotaxime23887.0%2263.6%21689.4%0.21 (0.08–0.55)0.002
Ceftazidime23783.5%2161.9%21685.6%0.27 (0.10–0.71)0.008
Cefepime21089.5%1973.7%19191.1%0.27 (0.09–0.85)0.025
Antipseudomonal fluoroquinolones
Ciprofloxacin36170.4%3754.1%32472.2%0.45 (0.23–0.90)0.024
Norfloxacin36060.3%3740.5%32362.5%0.41 (0.20–0.82)0.011
Folate pathway inhibitors
Cotrimoxazole35872.3%3672.2%32272.4%0.99 (0.46–2.14)0.986
Antipseudomonal carbapenems
Imipenem179100.0%18100.0%161100.0%
Nitrofuran derivatives
Nitrofurantoin35789.4%3783.8%32090.0%0.57 (0.22–1.48)0.251

1 Abbrevations: Amoxicillin/clavulanic acid = AM/CL, Piperacillin/Tazobactam = PIP/TZ

2 n’ – number of all determinations for a given antibiotic; % susc. – % susceptibility

Table IV

Susceptibility profile of E. coli (n = 363) isolated from patients of different age groups.

Antibiotics19–74 years (n = 133)75–85 years (n = 134)> 85 years (n = 96)75–85 years vs. 19–74 years> 85 years vs. 19–74 years
n’% susc.n’% susc.n’% susc.OR (95% CI)p-valueOR (95% CI)p-value
Ampicillin13231.1%13026.9%9233.7%0.82 (0.48–1.40)0.4611.13 (0.64–1.99)0.678
AM/CL13349.6%13351.1%9548.4%1.06 (0.66–1.72)0.8060.95 (0.56–1.61)0.858
PIP/TZ7386.3%8085.0%5490.7%0.90 (0.36–2.23)0.8191.56 (0.50–4.85)0.446
Amikacin7490.5%8381.9%5494.4%0.47 (0.18–1.24)0.1271.78 (0.44–7.21)0.422
Gentamicin7288.9%8589.4%5496.3%1.06 (0.38–2.89)0.9163.25 (0.66–15.97)0.147
Cefalexin7074.3%7875.6%4993.9%1.07 (0.51–2.26)0.8495.31 (1.47–19.19)0.011
Cefuroxime13285.6%13382.0%9391.4%0.76 (0.40–1.47)0.4211.79 (0.75–4.28)0.193
Cefotaxime8381.9%9585.3%6096.7%1.28 (0.58–2.83)0.5486.40 (1.40–29.14)0.017
Ceftazidime8380.7%9481.9%6090.0%1.08 (0.51–2.31)0.8392.15 (0.79–5.87)0.136
Cefepime7384.9%8287.8%5598.2%1.28 (0.51–3.21)0.6029.58 (1.20–76.64)0.033
Ciprofloxacin13272.0%13467.9%9571.6%0.82 (0.49–1.39)0.4710.98 (0.55–1.76)0.949
Norfloxacin13362.4%13259.1%9558.9%0.87 (0.53–1.43)0.5810.86 (0.50–1.48)0.598
Cotrimoxazole13074.6%13367.7%9575.8%0.71 (0.42–1.22)0.2151.06 (0.58–1.97)0.841
Imipenem57100.0%74100.0%48100.0%
Nitrofurantoin13291.7%13187.8%9488.3%0.65 (0.29–1.47)0.3030.69 (0.28–1.66)0.402

1 Abbrevations: Amoxicillin/clavulanic acid = AM/CL, Piperacillin/Tazobactam = PIP/TZ

2 n’ – number of all determinations for a given antibiotic; % susc. – % susceptibility

DOI: https://doi.org/10.21307/pjm-2018-061 | Journal eISSN: 2544-4646 | Journal ISSN: 1733-1331
Language: English
Page range: 517 - 524
Submitted on: May 22, 2018
Accepted on: Oct 8, 2018
Published on: Dec 10, 2018
Published by: Polish Society of Microbiologists
In partnership with: Paradigm Publishing Services
Publication frequency: 4 issues per year

© 2018 MIKOŁAJ MICHNO, ANTONI SYDOR, MARTA WAŁASZEK, WŁADYSŁAW SUŁOWICZ, published by Polish Society of Microbiologists
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.