Allelic Diversity Revealed Through SSR Polymorphisms at the Locus Encoding HMG-CoA Reductase in Rubber (Hevea brasiliensis)
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References
- AYERS, N. M., A. M. MCCLUNG, P. D. LARKIN, H. F. J., BLIGH, C. A. JONES and W. D. PARK (1997): Microsatellites and a single-nucleotide polymorphism differentiate apparent amylose classes in an extended pedigree of U.S. rice germplasm. Theoretical and Applied Genetics 94: 773-781.10.1007/s001220050477
- BAO, J. S., H. CORKE and M. SUN (2002): Microsatellites in starch-synthesizing genes in relation to starch physicochemical properties in waxy rice (Oryza sativa L.). Theoretical and Applied Genetics 105: 898-905.10.1007/s00122-002-1049-312582915
- BESSE, P., M. SEGUIN, P. LEBRUN, M. H. CHEVALLIER, D. NICHOLOAS and C. LANAUD (1994): Genetic diversity among wild and cultivated populations of Hevea brasiliensis assessed by nuclear RFLP analysis. Theoretical and Applied Genetics 88: 199-207.10.1007/BF0022589824185927
- CHAN, M. T. and S. M. YU (1998): The 3’ untranslated region of a rice α-amylase gene functions as a sugardependent mRNA stability determinant. Proceedings of the National Academy of Sciences, USA 95: 6543-6547.10.1073/pnas.95.11.6543278669601003
- CHEVALLIER, M. H. (1988): Genetic variability of Hevea brasiliensis germplasm using isozyme markers. Journal of Natural Rubber Research 3: 42-53.
- CHO, Y. G., T. ISHII, S. TEMNYKH, X. CHEN, L. LIPOVICH and S. R. MCCOUCH (2000): Diversity of microsatellites derived from genomic libraries and GenBank sequences in rice (Oryza sativa L.). Theoretical and Applied Genetics 100: 713-722.10.1007/s001220051343
- DOYLE, J. J. and J. L. DOYLE (1990): Isolation of plant DNA from fresh tissue. Focus 12: 13-15.
- DEAN, W. (1987): Brazil and the struggle for rubber: A study in environmental history. Cambridge University Press, Cambridge.
- LEKAWIPAT, N., K. TEERAWATANASUK, M. RODIER-GOUD, M. SEGUIN, A. VANAVICHIT, T. TOOJINDA and S. TRAGOONRUNG (2003): Genetic diversity analysis of wild germplasm and cultivated clones of Hevea brasiliensis Muell. Arg. by using microsatellite markers. Journal of Rubber Research 6(1): 36-47.
- LESPINASSE, D., M. RODIER-GOUD, L. GRIVET, A. LECONTE, H. LEGNATE and M. SEGUIN (2000): A saturated genetic linkage map of rubber tree (Hevea spp.) based on RFLP, AFLP, microsatellite, and isozyme markers. Theoretical and Applied Genetics 100: 127-138.10.1007/s001220050018
- LEWERS, K. S., S. M. N. STYAN, S. C. HOKANSON and N. V. BASSIL (2005): Strawberry GenBank-derived and genomic simple sequence repeat (SSR) markers and their utility with strawberry, blackberry, and red and black raspberry. Journal of the American Society for Horticultural Science 130: 102-115.10.21273/JASHS.130.1.102
- LI, Y., A. B. KOROL, T. FAHIMA and E. NEVO (2004): Microsatellites within genes: structure, function and evolution. Molecular Biology and Evolution 21: 991-1007.10.1093/molbev/msh07314963101
- LINK, W., C. DIXKENS, M. SINGH, M. SCHWALL and A. E. MELCHINGER (1995): Genetic diversity in European and Mediterranean faba bean germplasm revealed by RAPD markers. Theoretical and Applied Genetics 90: 27-32.10.1007/BF0022099224173780
- LOW, F. C., S. ATAN, H. JAAFAR and H. TAN (1996): Recent advances in the development of molecular markers for Hevea studies. Journal of Natural Rubber Research 11(1): 32-44.
- LUO, H., B. VAN COPPENOLLE, M. SEGUIN and M. BOUTRY (1995): Mitochondrial DNA polymorphism and phylogenetic relationships in Hevea brasiliensis. Molecular Breeding 1: 51-63.10.1007/BF01682089
- MOHD. NOOR, A. G. and N. IBRAHIM (1986): IRRDB Symposium, 11-13 November 1986, Malaysia.
- MORGANTE, M., M. HANAFEY and W. POWELL (2002): Microsatellites are preferentially associated with nonrepetitive DNA in plant genomes. Nature Genetics 30: 194-200.10.1038/ng82211799393
- NEERAJA, C. N., A. S. HARIPRASAD, S. MALATHI and E. A. SIDDIQ (2005): Characterization of tall landraces of rice (Oryza sativa L.) using gene-derived simple sequence repeats. Current Science 88: 149-152.
- NEI, M. (1973): Analysis of gene diversity in subdivided populations. Proceedings of the National Academy of Sciences, USA 70: 3321-3323.10.1073/pnas.70.12.33214272284519626
- ONG, S. H., M. N. A. GHANI, A. M. TAN and H. TAN (1983): New Hevea germplasm: Its introduction and potential. Proceedings of the Planters Conference, Rubber Research Institute of Malaysia, 1983, Kuala Lumpur 3: 3-17.
- POWELL, W., M. MORGANTE, C. ANDRE, M. HANAFEY, J. VOGEL, S. TINGEY and A. RAFALSKI (1996): The comparison of RAPD, RFLP and SSR (microsatellite) markers for germplasm analysis. Molecular Breeding 2: 225-238.10.1007/BF00564200
- ROY, C. B., M. A. NAZEER and T. SAHA (2004): Identification of simple sequence repeats in rubber (Hevea brasiliensis). Current Science 87: 807-811.
- SAHA, T., C. B. ROY and M. A. NAZEER (2005): Microsatellite variability and its use in the characterization of cultivated clones of Hevea brasiliensis. Plant Breeding 124: 86-92.10.1111/j.1439-0523.2004.01053.x
- SCHUPPERT, G. F., S. TANG, M. B. SLABAUGH and S. J. KNAPP (2006): The sunflower high-oleic mutant Ol carries variable tandem repeats of FAD2-1, a seed-specific oleoyl-phosphatidyl choline desaturase. Molecular Breeding 17: 241-256.10.1007/s11032-005-5680-y
- SCOTT, K. D., P. EGGLER, G. SEATON, M. ROSSETTO, E. M. ABLETT, L. S. LEE and R. J. HENRY (2000): Analysis of SSRs derived from grape ESTs. Theoretical and Applied Genetics 100: 723-726.10.1007/s001220051344
- SHOUCAI, C., S. HANSUANG, H. DONG QIONG, L. SHENG and Z. XUEQIN (1994): Identification of mildew resistant gene from Hevea tree by RAPD technique. Chinese Journal of Tropical Crops 15: 26.
- THIEL, T., W. MICHALEK, R. K. VARSHNEY and A. GRANER (2003): Exploiting EST databases for the development of cDNA derived microsatellite markers in barley (Hordeum vulgare L.). Theoretical and Applied Genetics 106: 411-422.10.1007/s00122-002-1031-012589540
- VAN DE PEER, Y. and R. DE WACHTER (1994): TREECON in Windows: A software package for the construction and drawing of evolutionary trees for Microsoft Windows. Computer Applications in Biosciences 10: 569-570.10.1093/bioinformatics/10.5.5697828077
- VARGHESE, Y. A., C. KNAAK, M. R. SETHURAJ and W. ECKE (1997): Evaluation of random amplified polymorphic DNA (RAPD) on Hevea brasiliensis. Plant Breeding 116: 47-57.10.1111/j.1439-0523.1997.tb00973.x
- WYCHERLEY, P. R. (1968): Introduction of Hevea to the Orient. The Planter 44: 127-137.
- YEH, F. and T. BOYLE (1997): Population genetic analysis of co-dominant markers and quantitative traits. Belgian Journal of Botany 129: 157.
- YEH, F., R. C. YANG and T. BOYLE (2001): Population genetic analysis (POPGENE, Version 1.32). http://www.ualberta.ca/-fyeh/info.htm.
Language: English
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Submitted on: Dec 29, 2005
Published on: Oct 14, 2017
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