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DNA From Ancient Cedar Wood From King Midas’ Tomb, Turkey, and Al-Aksa Mosque, Israel Cover

DNA From Ancient Cedar Wood From King Midas’ Tomb, Turkey, and Al-Aksa Mosque, Israel

By: S. O. Rogers and  Z. Kaya  
Open Access
|Oct 2017

References

  1. AYTUG, B. (1988): Le mobilier funeraire du roi Midas I. Pact 22: 357-368.
  2. BOYDAK, M. (2003): Regeneration of Lebanon cedar (Cedrus libani A. Rich.) on karstic lands in Turkey. Forest Ecol. Manag. 178: 231-243.
  3. CANO, R. J. and M. K. BORUCKI (1995): Revival and identification of bacterial spores in 25- and 40-million-yearold Dominican amber. Science 268: 1060-1064.10.1126/science.7538699
  4. DEGUILLOUX, M.-F., M.-H. PEMONG and R. J. PETIT (2002): Novel perspectives in wood certification and forensics: dry wood as a source of DNA. Proc. Royal Soc. Lond. Ser. B 269: 1039-1046.
  5. DEGUILLOUX, M.-F., M.-H. PEMONGE and R. J. PETIT (2004): DNA-based control of oak wood geographic origin in the context of the cooperage industry. Annals Forest Sci. 61: 97-104.10.1051/forest:2003089
  6. DEGUILLOUX, M.-F., M.-H. PEMONGE, L. BERTEL, A. KREMER and R. J. PETIT (2003): Checking the geographical origin of oak wood: molecular and statistical tools. Molec. Ecol. 12: 1629-1636.
  7. DUMOLIN-LAPÈGUE, S., M.-H. PEMONGE, L. GIELLY, P. TABERLET and R. J. PETIT (1999): Amplification of oak DNA from ancient and modern wood. Molec. Ecol. 8: 2137-2140.
  8. FILLEY, T. R., R. A. BLANCHETTE, E. SIMPSON and M. L. FOGEL (2001): Nitrogen cycling by wood decomposing soft-rot fungi in the “King Midas tomb,” Gordion, Turkey. Proc. Natl. Acad. Sci USA 98: 13346-13350.10.1073/pnas.221299598
  9. GUGERLI, F., F. PARDUCCI, L. and R. J. PETIT (2005): Ancient plant DNA: review and prospects. New Phytol. 166: 409-418.10.1111/j.1469-8137.2005.01360.x
  10. HOFREITER, M., D. SERRE, H. N. POINAR, M. KUCH and S. PÄÄBO (2001): Ancient DNA. Nature Rev. Genet. 2: 353-359.10.1038/35072071
  11. IÇGEN, Y. (2002): Genetic composition of Pinus brutia Ten. forests established with seeds from seed stands and orchards determined by using DNA markers. Ph.D. Dissertation, Middle East Technical University, Department of Biological Sciences, Ankara, Turkey.
  12. KANDEDMIR, G., I. KANDEMIR and Z. KAYA (2004): The Pattern of Genetic Variation in Turkish red pine (Pinus brutia Ten.) seed stands as determined by RAPD markers. Silvae Genetica 53: 169-175.10.1515/sg-2004-0031
  13. KAYA, Z. and D. B. NEALE (1995): Linkage map based on randomly amplified polymorphic DNA (RAPD) markers in Pinus brutia Ten. Silvae Genetica 44: 110-116.
  14. KAYIHAN, G. (2000): The genetic structure of Cedrus libani populations determined by DNA markers. MS Thesis, Middle East Technical University, Department of Biology, Ankara, Turkey.
  15. KIM, S., D. E. SOLTIS, P. S. SOLTIS and Y. SUH (2004): DNA sequences from Miocene fossils: an ndhF sequence of Magnolia latahensis (Magnoliaceae) and an rbcL sequence of Persea pseudocarolinensis (Lauraceae). Amer. J. Bot. 91: 615-620.10.3732/ajb.91.4.615
  16. LINDAHL, T. (1993): Instability and decay of the primary structure of DNA. Nature 362: 709-715.10.1038/362709a0
  17. LINDAHL, T. (1997): Facts and artifacts of ancient DNA. Cell 90: 1-3.10.1016/S0092-8674(00)80306-2
  18. LIPSCHITZ, N., G. BIGER, G. BONANI and W. WOOLPHI (1997): Comparative dating methods: Botanical identification and 14C dating of carved panels and beams from the Al-Aksa Mosque in Jerusalem. J. Archaeolog. Sci. 24: 1045-1050.
  19. MA, L. J., S. O. ROGERS, C. CATRANIS and W. T. STARMER (2000): Detection and characterization of ancient fungi entrapped in glacial ice. Mycologia 92: 286-295.10.2307/3761562
  20. MILLER, N. F. (1999): Interpreting ancient environment and patterns of land use: Seeds, charcoal and archaeological context. TUBA-AR II: 15-29.10.22520/tubaar.1999.0002
  21. MILLER, N. F. (1998): The macrobotanical evidence for vegetation in the Near East, c 18000/16000 BC to 4000 BC. Plaeorient. 23/2: 197-207.
  22. PÄÄBO, S., H. POINAR, D. SERRE, V. JAENICKE-DESPRES, J. HEBLER, N. ROHLAND, M. KUCH, J. KRAUSE, L. VIGILANT and M. HOFREITER (2004): Genetic analyses from ancient DNA. Ann. Rev. Genet. 38: 645-679.10.1146/annurev.genet.37.110801.14321415568989
  23. PÄÄBO, S. (1993): Ancient DNA. Sci. Amer. 267: 60-66.
  24. PÄÄBO, S. (1988): Molecular clonning of Ancient Egyptian Mummy DNA. Nature 314: 644-645.10.1038/314644a03990798
  25. PARDUCCI, L. and R. J. PETIT (2004): Ancient DNA - unlocking plants’ fossil secrets. New Phytol. 161: 335-339. 10.1111/j.1469-8137.2004.00987.x33873507
  26. ROGERS, S. O. (1994): Phylogenetic and taxonomic information from herbarium and mummified DNA, pp. 47-67 in DNA Utilization, Intellectual Property and Fossil DNA, edited by R. P. ADAMS, J. MILLER, E. GOLENBERG, and J. E. ADAMS, Missouri Botanical Gardens Press, St. Louis/MO.
  27. ROGERS, S. O. and A. J. BENDICH (1985): Extraction of DNA from milligram amounts of fresh, herbarium and mummified plant tissues. Plant Mol. Biol. 5: 69-76.10.1007/BF0002008824306565
  28. ROGERS, S. O. and A. J. BENDICH (1988): Extraction of DNA from plant tissues, pp. A6:1-10. In: Plant Molecular Biology Manual, edited by S. B. GELVIN and10.1007/978-94-017-5294-7_6
  29. R. A. SCHILPEROORT, Kluwer Academic Publishers, Boston/MA. ROGERS, S. O. and A. J. BENDICH (1994): Extraction of total cellular DNA from plants, algae, and fungi, pp. D1:1-8. In: Plant Molecular Biology Manual, 2nd ed., edited by S. B. GELVIN and R. A. SCHILPEROORT, Kluwer Academic Publishers, Dordrecht, The Netherlands.
  30. ROGERS, S. O., L. MA, Y. ZHAO, C. M. CATRANIS, W. T. STARMER and J. D. CASTELLO (2005): Recommendations for elimination of contaminants and authentication of isolates from ancient ice cores, pp. 5-21. In: Life in Ancient Ice, edited by J. D. CASTELLO and S. O. ROGERS, Princeton University Press, Princeton/NJ.10.1515/9781400880188-006
  31. ROGERS, S. O., S. REHNER, C. BLEDSOE, G. J. MUELLER and J. F. AMMIRATI (1989): Extraction of DNA from Basidiomycetes for ribosomal DNA hybridizations. Can. J. Bot. 67: 1235-1243.
  32. ROGERS, S. O., V. THERAISNATHAN, L. J. MA, Y. ZHAO, G. ZHANG, S. G. SHIN, J. D. CASTELLO and W. T. STARMER (2004): Comparison of protocols to decontaminate environmental ice samples for biological and molecular examinations. Appl. Environ. Microbiol. 70: 2540-2544.10.1128/AEM.70.4.2540-2544.200438313215066857
  33. SAVOLAINEN, V., P. CUÉNOUD, R. SPICHIGER, M. D. P. MARTINEZ, M. CRÈVECOEUR and J.-F. MANEN (1995): The use of herbarium specimens in DNA phylogenetics - evaluation and improvement. Plant Syst. Evol. 197: 87-98.
  34. SUYAMA, T., K. KAWAMURO, I. KINOSHITA, K. YOSHIMURA, Y. TSUMURA and H. TAKAHARA (1996): DNA sequence from a fossil pollen of Abies spp. from Pleistocene peat, in http://www.madsci.org/ (University of Washington, Medical School): The MadScientist Network.10.1266/ggs.71.1458828176
  35. SWOFFORD, D. L. (2000): PAUP: Phylogenetic Analysis Using Parsimony, Version 4.03, Sinauer Associates, Sunderland/MA.
  36. TANI, N., Y. TSUMURA and H. SATO (2003): Nuclear gene sequences and DNA variation of Cryptomeria japonica samples from the postglacial period. Molec. Ecol. 12: 859-868.
  37. TAUTZ, D. and M. RENZ (1983): An optimized freezesqueeze method for recovery of DNA from agarose gels. Anal. Biochem. 132: 14-19.
  38. WAYNE, R. K., J. A. LEONARD and A. COOPER (1999): Full of sound and fury: The recent history of ancient DNA. Ann. Rev. Ecol. Syst. 30: 457-477.10.1146/annurev.ecolsys.30.1.457
DOI: https://doi.org/10.1515/sg-2006-0009 | Journal eISSN: 2509-8934 | Journal ISSN: 0037-5349
Language: English
Page range: 54 - 62
Submitted on: Jul 22, 2005
Published on: Oct 19, 2017
Published by: Johann Heinrich von Thünen Institute
In partnership with: Paradigm Publishing Services
Publication frequency: 1 issue per year

© 2017 S. O. Rogers, Z. Kaya, published by Johann Heinrich von Thünen Institute
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.