Have a personal or library account? Click to login
Chromosome Microdissection, Cloning and Painting of the Chromosome 1 in Poplar (Populus tremula) Cover

Chromosome Microdissection, Cloning and Painting of the Chromosome 1 in Poplar (Populus tremula)

Open Access
|Oct 2017

References

  1. ANTONACCI, R., R. MARZELL, P. FINELLI, A. LONOCE, A. FORABOSCO, N. ARCHIDIACONO and M. ROCCHI (1995): A panel of subchromosomal painting libraries representing over regions of the human genome. Cytogenet Cell Genet 68: 25-32.10.1159/0001338827956353
  2. BRADSHAW, H. D., R. CEULEMANS, J. DAVIS and R. STETTLER (2000): Emerging model systems in plant biology: Poplar (Populus) as a model forest tree. J. Plant Growth Regul. 19: 306-313.10.1007/s003440000030
  3. BRUNNER, A. M., V. B. BUSOV and S. H. STRAUSS (2004): Poplar genome sequence: functional genomics in an ecologically dominant plant species. Trends Plant Sci. 9 (1): 49-56.10.1016/j.tplants.2003.11.00614729219
  4. CHEN, Q. and K. ARMSTRONG (1995): Characterization of a library from a single microdissected oat (Avena sativa L.) chromosome. Genome 38: 706-714.10.1139/g95-08918470198
  5. CHEN, R. Y., W. Q. SONG, X. L. LI and Z. P. AN (1979): A new method of plant mitosis chromosome spread. Acta Botanica Sinica 21: 297-8.
  6. CHEUNG, W. Y., G. MOORE, T. A. MONEY and M. D. GALE (1992): HpaII library indicates ‘methylation-free islands’ in wheat and barley. Theor Appl Genet 84: 739-746.10.1007/BF0022417924201368
  7. DENG, H. X., K. YOSHIURA, R. W. DIRKS, N. HARADA, T. HIROTA, K. TSUKAMOTO, Y. JINNO and N. NIIKAWA (1992): Chromosome-band-specific painting: chromosome in situ suppression hybridization using PCR products from a microdissected chromosome band as a probe pool. Hum Genet. 89 (1): 13-7.10.1007/BF002070341577461
  8. FLAVELL, R. B. (1980): The molecular characterisation and organisation of plant chromosome DNA sequences. Annu Rev Plant Physiol 31: 569-596.10.1146/annurev.pp.31.060180.003033
  9. FLAVELL, R. B., M. D. BENNETT, J. B. SMITH and D. B. SMITH (1974): Genome size and the proportion of repeated nucleotide sequence DNA in plants. Biochem Genet 12: 257-269.10.1007/BF004859474441361
  10. FUCHS, J., A. HOUBEN, A. BRANDES and I. SCHUBERT (1996): Chromosome ‘painting’ in plants - a feasible technique? Chromosoma 104: 315-320.10.1007/s004120050121
  11. FUKUI, K., M. MINEZAWA, K. KAMISUGI, M. ISHIKAWA, N. OHMIDO, T. YANAGISAWA, M. FUJISHITA and F. SAKAI (1992): Microdissection of plant chromosomes by argonion laser beam. Theor Appl Genet 84: 787-791.10.1007/BF0022738524201475
  12. HOUBEN, A., B. L. FIELD and V. A. SAUNDERS (2002): Microdissection and chromosome painting of plant B chromosomes. Methods in Cell Science 23: 115-124.
  13. HOUBEN, A., R. G. KYNAST, U. HEIM, H. HERMANN, R. N. JONES and J. W. FORSTER (1996): Molecular cytogenetic characterisation of the terminal heterochromatic segment of the B-chromosome of rye (Secale cereale). Chromosoma 105: 97-103.10.1007/BF025095198753699
  14. HOUBEN, A., C. R. LEACH, D. VERLIN, R. ROFE and J. N. TIMMIS (1997): A repetitive DNA sequence common to the different B chromosomes of the genus Brachycome. Chromosoma 106: 513-519.10.1007/PL000076899426283
  15. HUANG, D., W. WU, Y. ZHOU, Z. HU and L. LU (2004): Microdissection and molecular manipulation of single chromosomes in woody fruit trees with small chromosomes using pomelo (Citrus grandis) as a model. I. Construction of single chromosomal DNA libraries. Theor Appl Genet 108: 1366-1370.10.1007/s00122-003-1550-314727028
  16. JUNG, C., U. CLAUSSEN, B. HORSTHEMKE, F. FISCHER and R. G. HERRMANN (1992): A DNA library from an individual Beta patellaris chromosome conferring nematode resistance obtained by microdissection of meiotic metaphase chromosome. Plant Mol Biol. 20: 503-511.10.1007/BF000406091421153
  17. LI, M. X. and R. Y. CHEN (1985): A suggestion on the standardization of karyotype analysis in plants. Journal of Wuhan Botanical Research 3 (4): 297-302.
  18. LI, X. L., W. Q. SONG, W. S. XU and R. Y. CHEN (1998): An improved microdissection method of chromosomes. Acta Scientiarum Naturalium Universitatis Nankaiensis 31 (2): 102-105.
  19. LICHTER, P., T. CREMER, C. C. TANG, P. C. WATKINS, L. MANUELIDIS and D. C. WARD (1988): Rapid detection of human chromosome 21 aberrations by in situ hybridization. Proc Natl Acad Sci USA 85: 9664-9668.10.1073/pnas.85.24.96642828302974158
  20. LIU, B., G. SEGAL, J. M. VEGA, M. FELDMAN and S. ABBO (1997): Isolation and characterization of chromosomespecific DNA sequences from a chromosome arm genomic library of common wheat. Plant J 11: 959-965.10.1046/j.1365-313X.1997.11050959.x
  21. MURRAY, M. G. and W. F. THOMPSON (1980): Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res. 8 (19): 4321-5. 10.1093/nar/8.19.43213242417433111
  22. PINKEL, D., J. LANDEGENT, G. COLLINS, J. FUSCOE, R. SEGRARIS, J. LUCAS and J. GRAY (1988): Fluorescence in situ hybridization with human chromosome-specific libraries: Detection of trisomy 21 and translocations of chromosome 4. Proc Natl Acad Sci USA 85: 9138-9142.10.1073/pnas.85.23.91382826792973607
  23. PONELIES, N., N. STEIN and G. WEBER (1997): Microamplification of specific chromosome sequences; an improved method for genome analysis. Nucleic Acids Research 25 (17): 3555-3557.10.1093/nar/25.17.35551469189254720
  24. QI, Z. X., H. ZENG, X. L. LI, C. B. CHEN, W. Q. SONG and R. Y. Chen (2002): The molecular characterization of maize B chromosome specific AFLPs. Cell Research 12: 63-8.10.1038/sj.cr.729011111942412
  25. RIED, T., E. SCHRÖCK, Y. NING and J. WIENBERG1 (1998): Chromosome painting: a useful art. Human Molecular Genetics 7 (10): 1619-1626.10.1093/hmg/7.10.16199735383
  26. SAMBROOK, J., E. F. FRITSCH and T. MANIATIS: Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory press, Cold Spring Harbor, New York.
  27. SANDERY, M. J., J. FORSTER, S. R. MACADAM, R. BLUNDEN, R. N. JONES and S. D. M. BROWN (1991): Isolation of a sequence common to A and B-chromosomes of rye (Secale cereale) by microcloning. Plant Mol Biol Rep 9: 21-30.10.1007/BF02669286
  28. SCALENGHE, F., E. TURCO, J. E. EDSTROM, V. PIRROTTA and M. I. MELLI (1981): Microdissection and cloning of DNA from a specific region of Drosophila melanogaster polytene chromosomes. Chromosoma 82: 205-216.10.1007/BF002861056452995
  29. SCHONDELMAIER, J., R. MARTIN, A. JIAHOOR, A. HOUBEN, A. GRANER, H. U. KOOP, R. G. HERRMANN and C. JUNG (1993): Microdissection and microcloning of the barley (Hordeum vulgare L.) chromosome 1HS. Theor Appl Genet 86: 629-636.10.1007/BF0083871924193713
  30. SHIBATA, F., M. HIZUME and Y. KUROKI (1999): Chromosome painting of Y chromosomes and isolation of Y-specific repetitive sequence in the diocious plant Rumex acetosa. Chromosoma 108: 266-270.10.1007/s00412005037710460415
  31. STEIN, N., N. PONELIES, T. MUSKET, M. MCMULLEN and G. WEBER (1998): Chromosome micro-dissection and region-specific libraries from pachytene chromosomes of maize (Zea mays L.). Plant J 13: 281-289.10.1046/j.1365-313X.1998.00033.x
  32. TAYLOR, G. (2002): Populus : Arabidopsis for forestry. Do we need a model tree? Ann. Bot. 90: 677-687.
  33. THALHAMMER, S., S. LANGER, M. R. SPEICHER, W. M. HECKL and J. B. GEIGL (2004): Generation of chromosome painting probes from single chromosomes by laser microdissection and linker-adaptor PCR. Chromosome Res 12 (4): 337-43.10.1023/B:CHRO.0000034132.77192.5f
  34. VEGA, J. M., S. ABBO, M. FELDMAN and A. A. LEVY (1994): Chromosome painting in plants: in situ hybridization with a DNA probe from a specific microdissected chromosome arm of common wheat. Proc Natl Acad Sci 91: 12041-12045.10.1073/pnas.91.25.12041453727991581
  35. ZHANG, S. G., L. W. QI, S. Y. HAN, C. B. CHEN, X. L. LI, W. Q. SONG and R. Y. CHEN (2005): Karyotype comparisonof Aigeiros in Populus. Acta Horticuluture Sinica. 32 (1): 70-73.
  36. ZHOU, Y. H., Z. M. HU, B. Y. DANG, H. WANG, X. D. DENG, L. L. WANG and Z. H. CHEN (1999): Microdissection and microcloning of rye (Secale cereale L.) chromosome 1R. Chromosoma 108: 250-255.10.1007/s00412005037510460413
  37. ZIMMER, R., A. HABERFELD and A. M. V. GEBBINS (1997): Microisolation of the chicken Z chromosome and construction of microclone libraries. Genome 40: 865-872.10.1139/g97-81218464871
DOI: https://doi.org/10.1515/sg-2005-0031 | Journal eISSN: 2509-8934 | Journal ISSN: 0037-5349
Language: English
Page range: 211 - 217
Submitted on: May 13, 2005
|
Published on: Oct 19, 2017
In partnership with: Paradigm Publishing Services
Publication frequency: 1 issue per year

© 2017 Yong Zhang, S. G. Zhang, L.W. Qi, B. Liu, J. M. Gao, C. B. Chen, X. L. Li, Wenqin Song, published by Johann Heinrich von Thünen Institute
This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivatives 4.0 License.